RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 ZNF335Q9H4Z2 1342 aaPredicted RBP18.73■□□□□ 0.59
CDCA4P3-201ENST00000442572 CLTCL1P53675 1640 aa18.72■□□□□ 0.59
CDCA4P3-201ENST00000442572 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.71■□□□□ 0.59
CDCA4P3-201ENST00000442572 RIMS2Q9UQ26 1411 aa18.7■□□□□ 0.58
CDCA4P3-201ENST00000442572 ILDR1Q86SU0 546 aaPredicted RBP18.69■□□□□ 0.58
CDCA4P3-201ENST00000442572 STRCP1A6NGW2 1772 aa18.68■□□□□ 0.58
CDCA4P3-201ENST00000442572 HRCP23327 699 aa18.68■□□□□ 0.58
CDCA4P3-201ENST00000442572 PLEKHG1Q9ULL1 1385 aa18.68■□□□□ 0.58
CDCA4P3-201ENST00000442572 CHGAP10645 457 aaKnown RBP18.66■□□□□ 0.58
CDCA4P3-201ENST00000442572 DIP2AQ14689 1571 aa18.66■□□□□ 0.58
CDCA4P3-201ENST00000442572 RAB3GAP2Q9H2M9 1393 aa18.66■□□□□ 0.58
CDCA4P3-201ENST00000442572 MPHOSPH9Q99550 1183 aa18.65■□□□□ 0.58
CDCA4P3-201ENST00000442572 CHD2O14647 1828 aaKnown RBP18.64■□□□□ 0.57
CDCA4P3-201ENST00000442572 PPP1R15AO75807 674 aaPredicted RBP18.63■□□□□ 0.57
CDCA4P3-201ENST00000442572 NWD1Q149M9 1564 aa18.61■□□□□ 0.57
CDCA4P3-201ENST00000442572 NEXMIFQ5QGS0 1516 aa18.6■□□□□ 0.57
CDCA4P3-201ENST00000442572 CCDC144AA2RUR9 1427 aa18.59■□□□□ 0.57
CDCA4P3-201ENST00000442572 XIRP1Q702N8 1843 aaKnown RBP18.59■□□□□ 0.57
CDCA4P3-201ENST00000442572 TBX22Q9Y458 520 aa18.59■□□□□ 0.57
CDCA4P3-201ENST00000442572 PPLO60437 1756 aa18.59■□□□□ 0.57
CDCA4P3-201ENST00000442572 SETBP1Q9Y6X0 1596 aa18.59■□□□□ 0.57
CDCA4P3-201ENST00000442572 LRRC7Q96NW7 1537 aa18.59■□□□□ 0.57
CDCA4P3-201ENST00000442572 NKTRP30414 1462 aaKnown RBP18.58■□□□□ 0.56
CDCA4P3-201ENST00000442572 PIK3R4Q99570 1358 aa18.57■□□□□ 0.56
CDCA4P3-201ENST00000442572 RPGRIP1LQ68CZ1 1315 aa18.57■□□□□ 0.56
CDCA4P3-201ENST00000442572 KCNA6P17658 529 aa18.57■□□□□ 0.56
CDCA4P3-201ENST00000442572 ZNF326Q5BKZ1 582 aaKnown RBP18.57■□□□□ 0.56
CDCA4P3-201ENST00000442572 BCANQ96GW7 911 aa18.57■□□□□ 0.56
CDCA4P3-201ENST00000442572 NRXN3Q9Y4C0 1643 aa18.56■□□□□ 0.56
CDCA4P3-201ENST00000442572 SLC26A8Q96RN1 970 aa18.56■□□□□ 0.56
CDCA4P3-201ENST00000442572 IFT172Q9UG01 1749 aa18.55■□□□□ 0.56
CDCA4P3-201ENST00000442572 ADAMTS13Q76LX8 1427 aa18.55■□□□□ 0.56
CDCA4P3-201ENST00000442572 FOXD1Q16676 465 aa18.53■□□□□ 0.56
CDCA4P3-201ENST00000442572 VGFO15240 615 aaPredicted RBP18.52■□□□□ 0.56
CDCA4P3-201ENST00000442572 SPATA31E1Q6ZUB1 1445 aa18.51■□□□□ 0.55
CDCA4P3-201ENST00000442572 UBAP1LF5GYI3 381 aa18.51■□□□□ 0.55
CDCA4P3-201ENST00000442572 TOM1O60784 492 aa18.51■□□□□ 0.55
CDCA4P3-201ENST00000442572 NUTM2DQ5VT03 806 aaPredicted RBP18.5■□□□□ 0.55
CDCA4P3-201ENST00000442572 SETD1AO15047 1707 aaKnown RBP18.49■□□□□ 0.55
CDCA4P3-201ENST00000442572 NCOA3Q9Y6Q9 1424 aa18.49■□□□□ 0.55
CDCA4P3-201ENST00000442572 XRN1Q8IZH2 1706 aaKnown RBP18.48■□□□□ 0.55
CDCA4P3-201ENST00000442572 ANKRD30BQ9BXX2 1392 aa18.47■□□□□ 0.55
CDCA4P3-201ENST00000442572 PROSER2Q86WR7 435 aaPredicted RBP18.46■□□□□ 0.55
CDCA4P3-201ENST00000442572 TMEM94Q12767 1356 aa18.45■□□□□ 0.54
CDCA4P3-201ENST00000442572 ALKQ9UM73 1620 aa18.45■□□□□ 0.54
CDCA4P3-201ENST00000442572 LAMC1P11047 1609 aa18.41■□□□□ 0.54
CDCA4P3-201ENST00000442572 PRAG1Q86YV5 1406 aa18.4■□□□□ 0.54
CDCA4P3-201ENST00000442572 PTPRUQ92729 1446 aa18.4■□□□□ 0.54
CDCA4P3-201ENST00000442572 RGL3Q3MIN7 710 aa18.4■□□□□ 0.54
CDCA4P3-201ENST00000442572 AMOTL2Q9Y2J4 779 aa18.4■□□□□ 0.54
CDCA4P3-201ENST00000442572 MSH6P52701 1360 aa18.4■□□□□ 0.54
CDCA4P3-201ENST00000442572 MYOM2P54296 1465 aa18.39■□□□□ 0.54
CDCA4P3-201ENST00000442572 METP08581 1390 aa18.39■□□□□ 0.53
CDCA4P3-201ENST00000442572 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.38■□□□□ 0.53
CDCA4P3-201ENST00000442572 TRIM26Q12899 539 aaPredicted RBP18.38■□□□□ 0.53
CDCA4P3-201ENST00000442572 STAC3Q96MF2 364 aa18.38■□□□□ 0.53
CDCA4P3-201ENST00000442572 PIK3C2GO75747 1445 aa18.37■□□□□ 0.53
CDCA4P3-201ENST00000442572 NRXN1Q9ULB1 1477 aa18.37■□□□□ 0.53
CDCA4P3-201ENST00000442572 PTCH1Q13635 1447 aa18.36■□□□□ 0.53
CDCA4P3-201ENST00000442572 KNDC1Q76NI1 1749 aa18.35■□□□□ 0.53
CDCA4P3-201ENST00000442572 ADGRF5Q8IZF2 1346 aa18.35■□□□□ 0.53
CDCA4P3-201ENST00000442572 DCCP43146 1447 aa18.34■□□□□ 0.53
CDCA4P3-201ENST00000442572 PIP4K2BP78356 416 aa18.34■□□□□ 0.53
CDCA4P3-201ENST00000442572 FAM135BQ49AJ0 1406 aa18.33■□□□□ 0.53
CDCA4P3-201ENST00000442572 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.53
CDCA4P3-201ENST00000442572 C19orf44Q9H6X5 657 aa18.33■□□□□ 0.52
CDCA4P3-201ENST00000442572 ROBO1Q9Y6N7 1651 aa18.31■□□□□ 0.52
CDCA4P3-201ENST00000442572 CADPS2Q86UW7 1296 aa18.31■□□□□ 0.52
CDCA4P3-201ENST00000442572 NALCNQ8IZF0 1738 aa18.31■□□□□ 0.52
CDCA4P3-201ENST00000442572 C14orf37Q86TY3 774 aa18.3■□□□□ 0.52
CDCA4P3-201ENST00000442572 RBM33Q96EV2 1170 aaKnown RBP18.29■□□□□ 0.52
CDCA4P3-201ENST00000442572 TECPR2O15040 1411 aa18.29■□□□□ 0.52
CDCA4P3-201ENST00000442572 ADGRL3Q9HAR2 1447 aa18.29■□□□□ 0.52
CDCA4P3-201ENST00000442572 C14orf93Q9H972 538 aaKnown RBP18.28■□□□□ 0.52
CDCA4P3-201ENST00000442572 ASXL1Q8IXJ9 1541 aa18.28■□□□□ 0.52
CDCA4P3-201ENST00000442572 ATF3P18847 181 aa18.27■□□□□ 0.52
CDCA4P3-201ENST00000442572 SLAIN2Q9P270 581 aa18.27■□□□□ 0.52
CDCA4P3-201ENST00000442572 LRPPRCP42704 1394 aaKnown RBP18.27■□□□□ 0.51
CDCA4P3-201ENST00000442572 HSPA1LP34931 641 aa18.26■□□□□ 0.51
CDCA4P3-201ENST00000442572 ABCC11Q96J66 1382 aa18.26■□□□□ 0.51
CDCA4P3-201ENST00000442572 KIAA1210Q9ULL0 1709 aa18.26■□□□□ 0.51
CDCA4P3-201ENST00000442572 ROBO2Q9HCK4 1378 aa18.25■□□□□ 0.51
CDCA4P3-201ENST00000442572 YTHDC2Q9H6S0 1430 aaKnown RBP18.24■□□□□ 0.51
CDCA4P3-201ENST00000442572 DCAF11Q8TEB1 546 aa18.24■□□□□ 0.51
CDCA4P3-201ENST00000442572 DHX57Q6P158 1386 aaKnown RBP18.24■□□□□ 0.51
CDCA4P3-201ENST00000442572 SIRT1Q96EB6 747 aa18.23■□□□□ 0.51
CDCA4P3-201ENST00000442572 PHLPP1O60346 1717 aa18.22■□□□□ 0.51
CDCA4P3-201ENST00000442572 CDC42BPGQ6DT37 1551 aa18.21■□□□□ 0.51
CDCA4P3-201ENST00000442572 DLC1Q96QB1 1528 aa18.21■□□□□ 0.51
CDCA4P3-201ENST00000442572 ADGRB1O14514 1584 aa18.21■□□□□ 0.51
CDCA4P3-201ENST00000442572 CFAP70Q5T0N1 1121 aa18.2■□□□□ 0.5
CDCA4P3-201ENST00000442572 MST1RQ04912 1400 aa18.2■□□□□ 0.5
CDCA4P3-201ENST00000442572 AHDC1Q5TGY3 1603 aaPredicted RBP18.2■□□□□ 0.5
CDCA4P3-201ENST00000442572 TMEM132EQ6IEE7 984 aa18.19■□□□□ 0.5
CDCA4P3-201ENST00000442572 KDM2AQ9Y2K7 1162 aa18.19■□□□□ 0.5
CDCA4P3-201ENST00000442572 NHSL1Q5SYE7 1610 aa18.17■□□□□ 0.5
CDCA4P3-201ENST00000442572 STK26Q9P289 416 aa18.16■□□□□ 0.5
CDCA4P3-201ENST00000442572 COL16A1Q07092 1604 aaPredicted RBP18.16■□□□□ 0.5
CDCA4P3-201ENST00000442572 FMN2Q9NZ56 1722 aa18.15■□□□□ 0.5
CDCA4P3-201ENST00000442572 ARHGEF28Q8N1W1 1705 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms