RNA–Protein interactions for RNA: ENST00000440132.2

RNF220-205, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-205ENST00000440132 HDGFP51858 240 aaKnown RBP28.83■■■□□ 2.21
RNF220-205ENST00000440132 CERKQ8TCT0 537 aa28.83■■■□□ 2.21
RNF220-205ENST00000440132 RIMS2Q9UQ26 1411 aa28.83■■■□□ 2.21
RNF220-205ENST00000440132 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.78■■■□□ 2.2
RNF220-205ENST00000440132 PPP1R15AO75807 674 aaPredicted RBP28.75■■■□□ 2.19
RNF220-205ENST00000440132 ZNF326Q5BKZ1 582 aaKnown RBP28.74■■■□□ 2.19
RNF220-205ENST00000440132 PLEKHG1Q9ULL1 1385 aa28.74■■■□□ 2.19
RNF220-205ENST00000440132 CCDC144AA2RUR9 1427 aa28.71■■■□□ 2.19
RNF220-205ENST00000440132 NUTM2DQ5VT03 806 aaPredicted RBP28.71■■■□□ 2.19
RNF220-205ENST00000440132 BCANQ96GW7 911 aa28.7■■■□□ 2.18
RNF220-205ENST00000440132 CPS1P31327 1500 aa28.69■■■□□ 2.18
RNF220-205ENST00000440132 SLC26A8Q96RN1 970 aa28.69■■■□□ 2.18
RNF220-205ENST00000440132 STRCP1A6NGW2 1772 aa28.68■■■□□ 2.18
RNF220-205ENST00000440132 IQSEC2Q5JU85 1478 aa28.67■■■□□ 2.18
RNF220-205ENST00000440132 TRIM26Q12899 539 aaPredicted RBP28.67■■■□□ 2.18
RNF220-205ENST00000440132 NEXMIFQ5QGS0 1516 aa28.67■■■□□ 2.18
RNF220-205ENST00000440132 FBXO41Q8TF61 875 aa28.66■■■□□ 2.18
RNF220-205ENST00000440132 SENP3Q9H4L4 574 aaPredicted RBP28.65■■■□□ 2.18
RNF220-205ENST00000440132 RPGRIP1LQ68CZ1 1315 aa28.62■■■□□ 2.17
RNF220-205ENST00000440132 ILDR1Q86SU0 546 aaPredicted RBP28.61■■■□□ 2.17
RNF220-205ENST00000440132 TBX22Q9Y458 520 aa28.61■■■□□ 2.17
RNF220-205ENST00000440132 ANKRD30BQ9BXX2 1392 aa28.6■■■□□ 2.17
RNF220-205ENST00000440132 PPLO60437 1756 aa28.6■■■□□ 2.17
RNF220-205ENST00000440132 SPATA31E1Q6ZUB1 1445 aa28.6■■■□□ 2.17
RNF220-205ENST00000440132 ADAMTS13Q76LX8 1427 aa28.6■■■□□ 2.17
RNF220-205ENST00000440132 DIP2AQ14689 1571 aa28.59■■■□□ 2.17
RNF220-205ENST00000440132 KCNA6P17658 529 aa28.58■■■□□ 2.17
RNF220-205ENST00000440132 SETBP1Q9Y6X0 1596 aa28.57■■■□□ 2.16
RNF220-205ENST00000440132 CHD2O14647 1828 aaKnown RBP28.57■■■□□ 2.16
RNF220-205ENST00000440132 VGFO15240 615 aaPredicted RBP28.56■■■□□ 2.16
RNF220-205ENST00000440132 NRXN3Q9Y4C0 1643 aa28.56■■■□□ 2.16
RNF220-205ENST00000440132 LRRC7Q96NW7 1537 aa28.55■■■□□ 2.16
RNF220-205ENST00000440132 RGL3Q3MIN7 710 aa28.55■■■□□ 2.16
RNF220-205ENST00000440132 NWD1Q149M9 1564 aa28.54■■■□□ 2.16
RNF220-205ENST00000440132 IFT172Q9UG01 1749 aa28.52■■■□□ 2.16
RNF220-205ENST00000440132 PIK3R4Q99570 1358 aa28.51■■■□□ 2.16
RNF220-205ENST00000440132 XIRP1Q702N8 1843 aaKnown RBP28.48■■■□□ 2.15
RNF220-205ENST00000440132 NKTRP30414 1462 aaKnown RBP28.47■■■□□ 2.15
RNF220-205ENST00000440132 PROSER2Q86WR7 435 aaPredicted RBP28.44■■■□□ 2.14
RNF220-205ENST00000440132 ADGRF5Q8IZF2 1346 aa28.43■■■□□ 2.14
RNF220-205ENST00000440132 UBAP1LF5GYI3 381 aa28.43■■■□□ 2.14
RNF220-205ENST00000440132 METP08581 1390 aa28.42■■■□□ 2.14
RNF220-205ENST00000440132 SETD1AO15047 1707 aaKnown RBP28.42■■■□□ 2.14
RNF220-205ENST00000440132 ALKQ9UM73 1620 aa28.42■■■□□ 2.14
RNF220-205ENST00000440132 PTPRUQ92729 1446 aa28.42■■■□□ 2.14
RNF220-205ENST00000440132 TMEM94Q12767 1356 aa28.41■■■□□ 2.14
RNF220-205ENST00000440132 AMOTL2Q9Y2J4 779 aa28.4■■■□□ 2.14
RNF220-205ENST00000440132 TOM1O60784 492 aa28.38■■■□□ 2.13
RNF220-205ENST00000440132 XRN1Q8IZH2 1706 aaKnown RBP28.37■■■□□ 2.13
RNF220-205ENST00000440132 MYOM2P54296 1465 aa28.36■■■□□ 2.13
RNF220-205ENST00000440132 RBM33Q96EV2 1170 aaKnown RBP28.36■■■□□ 2.13
RNF220-205ENST00000440132 PIK3C2GO75747 1445 aa28.34■■■□□ 2.13
RNF220-205ENST00000440132 DHX57Q6P158 1386 aaKnown RBP28.33■■■□□ 2.13
RNF220-205ENST00000440132 NRXN1Q9ULB1 1477 aa28.33■■■□□ 2.13
RNF220-205ENST00000440132 NCOA3Q9Y6Q9 1424 aa28.32■■■□□ 2.12
RNF220-205ENST00000440132 DCAF11Q8TEB1 546 aa28.29■■■□□ 2.12
RNF220-205ENST00000440132 STAC3Q96MF2 364 aa28.29■■■□□ 2.12
RNF220-205ENST00000440132 MSH6P52701 1360 aa28.27■■■□□ 2.12
RNF220-205ENST00000440132 KDM2AQ9Y2K7 1162 aa28.27■■■□□ 2.12
RNF220-205ENST00000440132 PIP4K2BP78356 416 aa28.26■■■□□ 2.11
RNF220-205ENST00000440132 C14orf93Q9H972 538 aaKnown RBP28.26■■■□□ 2.11
RNF220-205ENST00000440132 LAMC1P11047 1609 aa28.25■■■□□ 2.11
RNF220-205ENST00000440132 SCAF1Q9H7N4 1312 aaKnown RBP28.24■■■□□ 2.11
RNF220-205ENST00000440132 C14orf37Q86TY3 774 aa28.23■■■□□ 2.11
RNF220-205ENST00000440132 PRAG1Q86YV5 1406 aa28.23■■■□□ 2.11
RNF220-205ENST00000440132 PTCH1Q13635 1447 aa28.22■■■□□ 2.11
RNF220-205ENST00000440132 SIN3AQ96ST3 1273 aa28.22■■■□□ 2.11
RNF220-205ENST00000440132 PCGF6Q9BYE7 350 aa28.22■■■□□ 2.11
RNF220-205ENST00000440132 ASXL1Q8IXJ9 1541 aa28.22■■■□□ 2.11
RNF220-205ENST00000440132 CFAP70Q5T0N1 1121 aa28.21■■■□□ 2.11
RNF220-205ENST00000440132 TMEM132EQ6IEE7 984 aa28.21■■■□□ 2.11
RNF220-205ENST00000440132 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.21■■■□□ 2.11
RNF220-205ENST00000440132 C19orf44Q9H6X5 657 aa28.2■■■□□ 2.1
RNF220-205ENST00000440132 LRPPRCP42704 1394 aaKnown RBP28.18■■■□□ 2.1
RNF220-205ENST00000440132 ROBO2Q9HCK4 1378 aa28.18■■■□□ 2.1
RNF220-205ENST00000440132 KNDC1Q76NI1 1749 aa28.16■■■□□ 2.1
RNF220-205ENST00000440132 NEUROD1Q13562 356 aa28.16■■■□□ 2.1
RNF220-205ENST00000440132 STK26Q9P289 416 aa28.16■■■□□ 2.1
RNF220-205ENST00000440132 ABCC11Q96J66 1382 aa28.15■■■□□ 2.1
RNF220-205ENST00000440132 TECPR2O15040 1411 aa28.15■■■□□ 2.1
RNF220-205ENST00000440132 YTHDC2Q9H6S0 1430 aaKnown RBP28.15■■■□□ 2.1
RNF220-205ENST00000440132 CADPS2Q86UW7 1296 aa28.14■■■□□ 2.1
RNF220-205ENST00000440132 NALCNQ8IZF0 1738 aa28.13■■■□□ 2.09
RNF220-205ENST00000440132 ATF3P18847 181 aa28.13■■■□□ 2.09
RNF220-205ENST00000440132 SLAIN2Q9P270 581 aa28.13■■■□□ 2.09
RNF220-205ENST00000440132 DCCP43146 1447 aa28.12■■■□□ 2.09
RNF220-205ENST00000440132 FAM135BQ49AJ0 1406 aa28.12■■■□□ 2.09
RNF220-205ENST00000440132 ADGRL3Q9HAR2 1447 aa28.12■■■□□ 2.09
RNF220-205ENST00000440132 L3MBTL2Q969R5 705 aa28.1■■■□□ 2.09
RNF220-205ENST00000440132 ADGRB1O14514 1584 aa28.1■■■□□ 2.09
RNF220-205ENST00000440132 ROBO1Q9Y6N7 1651 aa28.08■■■□□ 2.09
RNF220-205ENST00000440132 HSPA1LP34931 641 aa28.08■■■□□ 2.09
RNF220-205ENST00000440132 SIRT1Q96EB6 747 aa28.08■■■□□ 2.09
RNF220-205ENST00000440132 WAPLQ7Z5K2 1190 aa28.06■■■□□ 2.08
RNF220-205ENST00000440132 KIAA1210Q9ULL0 1709 aa28.06■■■□□ 2.08
RNF220-205ENST00000440132 DLC1Q96QB1 1528 aa28.02■■■□□ 2.08
RNF220-205ENST00000440132 PLEKHH1Q9ULM0 1364 aa28.01■■■□□ 2.07
RNF220-205ENST00000440132 MST1RQ04912 1400 aa28.01■■■□□ 2.07
RNF220-205ENST00000440132 TRAK1Q9UPV9 953 aa27.98■■■□□ 2.07
RNF220-205ENST00000440132 PRAM1Q96QH2 718 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms