RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 KCNA6P17658 529 aa30.85■■■□□ 2.53
NCKIPSD-206ENST00000439518 HSPA1LP34931 641 aa30.85■■■□□ 2.53
NCKIPSD-206ENST00000439518 NAIPQ13075 1403 aa30.84■■■□□ 2.53
NCKIPSD-206ENST00000439518 PLEKHG1Q9ULL1 1385 aa30.83■■■□□ 2.53
NCKIPSD-206ENST00000439518 HDGFP51858 240 aaKnown RBP30.83■■■□□ 2.53
NCKIPSD-206ENST00000439518 CHGAP10645 457 aaKnown RBP30.81■■■□□ 2.52
NCKIPSD-206ENST00000439518 XIRP1Q702N8 1843 aaKnown RBP30.8■■■□□ 2.52
NCKIPSD-206ENST00000439518 PPP1R15AO75807 674 aaPredicted RBP30.78■■■□□ 2.52
NCKIPSD-206ENST00000439518 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.78■■■□□ 2.52
NCKIPSD-206ENST00000439518 BCANQ96GW7 911 aa30.78■■■□□ 2.52
NCKIPSD-206ENST00000439518 TMEM94Q12767 1356 aa30.76■■■□□ 2.51
NCKIPSD-206ENST00000439518 NWD1Q149M9 1564 aa30.75■■■□□ 2.51
NCKIPSD-206ENST00000439518 SENP3Q9H4L4 574 aaPredicted RBP30.74■■■□□ 2.51
NCKIPSD-206ENST00000439518 HFM1A2PYH4 1435 aa30.73■■■□□ 2.51
NCKIPSD-206ENST00000439518 TBX22Q9Y458 520 aa30.73■■■□□ 2.51
NCKIPSD-206ENST00000439518 NKTRP30414 1462 aaKnown RBP30.73■■■□□ 2.51
NCKIPSD-206ENST00000439518 PROSER2Q86WR7 435 aaPredicted RBP30.72■■■□□ 2.51
NCKIPSD-206ENST00000439518 SPHKAPQ2M3C7 1700 aa30.71■■■□□ 2.51
NCKIPSD-206ENST00000439518 ILDR2Q71H61 639 aa30.71■■■□□ 2.51
NCKIPSD-206ENST00000439518 NUTM2DQ5VT03 806 aaPredicted RBP30.69■■■□□ 2.5
NCKIPSD-206ENST00000439518 ADAMTS13Q76LX8 1427 aa30.68■■■□□ 2.5
NCKIPSD-206ENST00000439518 RBM33Q96EV2 1170 aaKnown RBP30.67■■■□□ 2.5
NCKIPSD-206ENST00000439518 CHD2O14647 1828 aaKnown RBP30.66■■■□□ 2.5
NCKIPSD-206ENST00000439518 DIP2AQ14689 1571 aa30.62■■■□□ 2.49
NCKIPSD-206ENST00000439518 TRPM2O94759 1503 aa30.62■■■□□ 2.49
NCKIPSD-206ENST00000439518 FAM135BQ49AJ0 1406 aa30.61■■■□□ 2.49
NCKIPSD-206ENST00000439518 TRIM52Q96A61 297 aa30.6■■■□□ 2.49
NCKIPSD-206ENST00000439518 PIK3R4Q99570 1358 aa30.6■■■□□ 2.49
NCKIPSD-206ENST00000439518 CLTCL1P53675 1640 aa30.59■■■□□ 2.49
NCKIPSD-206ENST00000439518 MED1Q15648 1581 aaPredicted RBP30.58■■■□□ 2.49
NCKIPSD-206ENST00000439518 MSH6P52701 1360 aa30.56■■■□□ 2.48
NCKIPSD-206ENST00000439518 ZNF326Q5BKZ1 582 aaKnown RBP30.56■■■□□ 2.48
NCKIPSD-206ENST00000439518 SLC4A1APQ9BWU0 796 aaKnown RBP30.54■■■□□ 2.48
NCKIPSD-206ENST00000439518 NCOA3Q9Y6Q9 1424 aa30.54■■■□□ 2.48
NCKIPSD-206ENST00000439518 SETBP1Q9Y6X0 1596 aa30.53■■■□□ 2.48
NCKIPSD-206ENST00000439518 NRXN3Q9Y4C0 1643 aa30.52■■■□□ 2.48
NCKIPSD-206ENST00000439518 PTPRUQ92729 1446 aa30.5■■■□□ 2.47
NCKIPSD-206ENST00000439518 NEXMIFQ5QGS0 1516 aa30.5■■■□□ 2.47
NCKIPSD-206ENST00000439518 SLAIN2Q9P270 581 aa30.48■■■□□ 2.47
NCKIPSD-206ENST00000439518 AMOTL2Q9Y2J4 779 aa30.48■■■□□ 2.47
NCKIPSD-206ENST00000439518 ROBO1Q9Y6N7 1651 aa30.47■■■□□ 2.47
NCKIPSD-206ENST00000439518 KIF1BO60333 1816 aa30.46■■■□□ 2.47
NCKIPSD-206ENST00000439518 SOCS7O14512 581 aa30.46■■■□□ 2.47
NCKIPSD-206ENST00000439518 METP08581 1390 aa30.42■■■□□ 2.46
NCKIPSD-206ENST00000439518 C19orf44Q9H6X5 657 aa30.42■■■□□ 2.46
NCKIPSD-206ENST00000439518 C14orf37Q86TY3 774 aa30.41■■■□□ 2.46
NCKIPSD-206ENST00000439518 XRN1Q8IZH2 1706 aaKnown RBP30.41■■■□□ 2.46
NCKIPSD-206ENST00000439518 FOXD1Q16676 465 aa30.39■■■□□ 2.46
NCKIPSD-206ENST00000439518 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.37■■■□□ 2.45
NCKIPSD-206ENST00000439518 CADPS2Q86UW7 1296 aa30.37■■■□□ 2.45
NCKIPSD-206ENST00000439518 RPGRIP1LQ68CZ1 1315 aa30.37■■■□□ 2.45
NCKIPSD-206ENST00000439518 VGFO15240 615 aaPredicted RBP30.36■■■□□ 2.45
NCKIPSD-206ENST00000439518 MPHOSPH9Q99550 1183 aa30.36■■■□□ 2.45
NCKIPSD-206ENST00000439518 ATF3P18847 181 aa30.34■■■□□ 2.45
NCKIPSD-206ENST00000439518 PHF23Q9BUL5 403 aaPredicted RBP30.33■■■□□ 2.45
NCKIPSD-206ENST00000439518 DCCP43146 1447 aa30.3■■■□□ 2.44
NCKIPSD-206ENST00000439518 ACIN1Q9UKV3 1341 aaKnown RBP30.29■■■□□ 2.44
NCKIPSD-206ENST00000439518 CCDC144AA2RUR9 1427 aa30.29■■■□□ 2.44
NCKIPSD-206ENST00000439518 SETD5Q9C0A6 1442 aa30.29■■■□□ 2.44
NCKIPSD-206ENST00000439518 PHLPP1O60346 1717 aa30.27■■■□□ 2.44
NCKIPSD-206ENST00000439518 PPLO60437 1756 aa30.26■■■□□ 2.44
NCKIPSD-206ENST00000439518 SETD1AO15047 1707 aaKnown RBP30.26■■■□□ 2.43
NCKIPSD-206ENST00000439518 SPATA31E1Q6ZUB1 1445 aa30.25■■■□□ 2.43
NCKIPSD-206ENST00000439518 ADGRL3Q9HAR2 1447 aa30.22■■■□□ 2.43
NCKIPSD-206ENST00000439518 COL16A1Q07092 1604 aaPredicted RBP30.22■■■□□ 2.43
NCKIPSD-206ENST00000439518 RGS17Q9UGC6 210 aaPredicted RBP30.22■■■□□ 2.43
NCKIPSD-206ENST00000439518 JCADQ9P266 1359 aa30.21■■■□□ 2.43
NCKIPSD-206ENST00000439518 BRINP3Q76B58 766 aa30.21■■■□□ 2.43
NCKIPSD-206ENST00000439518 PRAG1Q86YV5 1406 aa30.21■■■□□ 2.43
NCKIPSD-206ENST00000439518 AHDC1Q5TGY3 1603 aaPredicted RBP30.2■■■□□ 2.43
NCKIPSD-206ENST00000439518 PTCH1Q13635 1447 aa30.2■■■□□ 2.42
NCKIPSD-206ENST00000439518 MST1RQ04912 1400 aa30.19■■■□□ 2.42
NCKIPSD-206ENST00000439518 RGL3Q3MIN7 710 aa30.18■■■□□ 2.42
NCKIPSD-206ENST00000439518 ADGRF5Q8IZF2 1346 aa30.18■■■□□ 2.42
NCKIPSD-206ENST00000439518 RAB3GAP2Q9H2M9 1393 aa30.17■■■□□ 2.42
NCKIPSD-206ENST00000439518 ROBO2Q9HCK4 1378 aa30.17■■■□□ 2.42
NCKIPSD-206ENST00000439518 ANKRD30BQ9BXX2 1392 aa30.16■■■□□ 2.42
NCKIPSD-206ENST00000439518 NALCNQ8IZF0 1738 aa30.15■■■□□ 2.42
NCKIPSD-206ENST00000439518 ASXL1Q8IXJ9 1541 aa30.12■■■□□ 2.41
NCKIPSD-206ENST00000439518 IFT172Q9UG01 1749 aa30.12■■■□□ 2.41
NCKIPSD-206ENST00000439518 SPATA31A6Q5VVP1 1343 aa30.08■■■□□ 2.41
NCKIPSD-206ENST00000439518 PIK3C2GO75747 1445 aa30.05■■■□□ 2.4
NCKIPSD-206ENST00000439518 C1orf167Q5SNV9 1468 aa30.05■■■□□ 2.4
NCKIPSD-206ENST00000439518 SHPRHQ149N8 1683 aa30.04■■■□□ 2.4
NCKIPSD-206ENST00000439518 POTEAQ6S8J7 498 aa30.04■■■□□ 2.4
NCKIPSD-206ENST00000439518 NHSL1Q5SYE7 1610 aa30.04■■■□□ 2.4
NCKIPSD-206ENST00000439518 LRP6O75581 1613 aa30.03■■■□□ 2.4
NCKIPSD-206ENST00000439518 TECPR2O15040 1411 aa30.02■■■□□ 2.4
NCKIPSD-206ENST00000439518 LRPPRCP42704 1394 aaKnown RBP30.02■■■□□ 2.4
NCKIPSD-206ENST00000439518 HRCP23327 699 aa30■■■□□ 2.39
NCKIPSD-206ENST00000439518 TMEM132EQ6IEE7 984 aa29.99■■■□□ 2.39
NCKIPSD-206ENST00000439518 DDX17Q92841 729 aaKnown RBP29.99■■■□□ 2.39
NCKIPSD-206ENST00000439518 ABCC11Q96J66 1382 aa29.99■■■□□ 2.39
NCKIPSD-206ENST00000439518 STK26Q9P289 416 aa29.98■■■□□ 2.39
NCKIPSD-206ENST00000439518 NRXN1Q9ULB1 1477 aa29.98■■■□□ 2.39
NCKIPSD-206ENST00000439518 LRRC59Q96AG4 307 aaKnown RBP29.97■■■□□ 2.39
NCKIPSD-206ENST00000439518 MYOM2P54296 1465 aa29.96■■■□□ 2.39
NCKIPSD-206ENST00000439518 ORAI2Q96SN7 254 aa29.95■■■□□ 2.39
NCKIPSD-206ENST00000439518 C14orf93Q9H972 538 aaKnown RBP29.95■■■□□ 2.39
NCKIPSD-206ENST00000439518 LAMC1P11047 1609 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms