RNA–Protein interactions for RNA: ENST00000438981.1

FN1-210, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-210ENST00000438981 PPLO60437 1756 aa12.1□□□□□ -0.47
FN1-210ENST00000438981 NEXMIFQ5QGS0 1516 aa12.1□□□□□ -0.47
FN1-210ENST00000438981 RIMS2Q9UQ26 1411 aa12.1□□□□□ -0.47
FN1-210ENST00000438981 IFT172Q9UG01 1749 aa12.09□□□□□ -0.47
FN1-210ENST00000438981 STAG3Q9UJ98 1225 aa12.09□□□□□ -0.47
FN1-210ENST00000438981 LRRC7Q96NW7 1537 aa12.09□□□□□ -0.47
FN1-210ENST00000438981 SETD1AO15047 1707 aaKnown RBP12.08□□□□□ -0.47
FN1-210ENST00000438981 TXNDC2Q86VQ3 553 aa12.07□□□□□ -0.48
FN1-210ENST00000438981 EID1Q9Y6B2 187 aa12.07□□□□□ -0.48
FN1-210ENST00000438981 SETBP1Q9Y6X0 1596 aa12.07□□□□□ -0.48
FN1-210ENST00000438981 PLEKHG1Q9ULL1 1385 aa12.06□□□□□ -0.48
FN1-210ENST00000438981 NKTRP30414 1462 aaKnown RBP12.06□□□□□ -0.48
FN1-210ENST00000438981 XRN1Q8IZH2 1706 aaKnown RBP12.06□□□□□ -0.48
FN1-210ENST00000438981 ADAMTS13Q76LX8 1427 aa12.03□□□□□ -0.48
FN1-210ENST00000438981 SETD5Q9C0A6 1442 aa12.03□□□□□ -0.48
FN1-210ENST00000438981 TRIM52Q96A61 297 aa12.02□□□□□ -0.49
FN1-210ENST00000438981 CHGAP10645 457 aaKnown RBP12.01□□□□□ -0.49
FN1-210ENST00000438981 PPP1R15AO75807 674 aaPredicted RBP12□□□□□ -0.49
FN1-210ENST00000438981 RAB3GAP2Q9H2M9 1393 aa12□□□□□ -0.49
FN1-210ENST00000438981 SLC26A8Q96RN1 970 aa11.99□□□□□ -0.49
FN1-210ENST00000438981 SLC4A1APQ9BWU0 796 aaKnown RBP11.99□□□□□ -0.49
FN1-210ENST00000438981 NALCNQ8IZF0 1738 aa11.98□□□□□ -0.49
FN1-210ENST00000438981 UBAP1LF5GYI3 381 aa11.98□□□□□ -0.49
FN1-210ENST00000438981 SENP3Q9H4L4 574 aaPredicted RBP11.98□□□□□ -0.49
FN1-210ENST00000438981 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.97□□□□□ -0.49
FN1-210ENST00000438981 ROBO1Q9Y6N7 1651 aa11.97□□□□□ -0.49
FN1-210ENST00000438981 FOXD1Q16676 465 aa11.97□□□□□ -0.49
FN1-210ENST00000438981 NUTM2DQ5VT03 806 aaPredicted RBP11.97□□□□□ -0.49
FN1-210ENST00000438981 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.97□□□□□ -0.49
FN1-210ENST00000438981 CCDC144AA2RUR9 1427 aa11.96□□□□□ -0.49
FN1-210ENST00000438981 SPATA31E1Q6ZUB1 1445 aa11.95□□□□□ -0.5
FN1-210ENST00000438981 PTPRUQ92729 1446 aa11.95□□□□□ -0.5
FN1-210ENST00000438981 TMEM94Q12767 1356 aa11.95□□□□□ -0.5
FN1-210ENST00000438981 KNDC1Q76NI1 1749 aa11.95□□□□□ -0.5
FN1-210ENST00000438981 KCNA6P17658 529 aa11.95□□□□□ -0.5
FN1-210ENST00000438981 PIK3R4Q99570 1358 aa11.94□□□□□ -0.5
FN1-210ENST00000438981 HDGFP51858 240 aaKnown RBP11.94□□□□□ -0.5
FN1-210ENST00000438981 ZNF326Q5BKZ1 582 aaKnown RBP11.94□□□□□ -0.5
FN1-210ENST00000438981 BCANQ96GW7 911 aa11.94□□□□□ -0.5
FN1-210ENST00000438981 LAMC1P11047 1609 aa11.93□□□□□ -0.5
FN1-210ENST00000438981 MPHOSPH9Q99550 1183 aa11.93□□□□□ -0.5
FN1-210ENST00000438981 ASXL1Q8IXJ9 1541 aa11.92□□□□□ -0.5
FN1-210ENST00000438981 TBX22Q9Y458 520 aa11.92□□□□□ -0.5
FN1-210ENST00000438981 ACIN1Q9UKV3 1341 aaKnown RBP11.91□□□□□ -0.5
FN1-210ENST00000438981 TOM1O60784 492 aa11.91□□□□□ -0.5
FN1-210ENST00000438981 PIP4K2BP78356 416 aa11.91□□□□□ -0.5
FN1-210ENST00000438981 PRAG1Q86YV5 1406 aa11.91□□□□□ -0.5
FN1-210ENST00000438981 PHLPP1O60346 1717 aa11.91□□□□□ -0.5
FN1-210ENST00000438981 METP08581 1390 aa11.91□□□□□ -0.5
FN1-210ENST00000438981 SCAF1Q9H7N4 1312 aaKnown RBP11.9□□□□□ -0.5
FN1-210ENST00000438981 MED1Q15648 1581 aaPredicted RBP11.9□□□□□ -0.5
FN1-210ENST00000438981 MYOM2P54296 1465 aa11.89□□□□□ -0.51
FN1-210ENST00000438981 PTCH1Q13635 1447 aa11.89□□□□□ -0.51
FN1-210ENST00000438981 NCOA3Q9Y6Q9 1424 aa11.89□□□□□ -0.51
FN1-210ENST00000438981 RBM33Q96EV2 1170 aaKnown RBP11.89□□□□□ -0.51
FN1-210ENST00000438981 MSH6P52701 1360 aa11.89□□□□□ -0.51
FN1-210ENST00000438981 NRXN1Q9ULB1 1477 aa11.89□□□□□ -0.51
FN1-210ENST00000438981 PIK3C2GO75747 1445 aa11.88□□□□□ -0.51
FN1-210ENST00000438981 PROSER2Q86WR7 435 aaPredicted RBP11.88□□□□□ -0.51
FN1-210ENST00000438981 RPGRIP1LQ68CZ1 1315 aa11.87□□□□□ -0.51
FN1-210ENST00000438981 COL16A1Q07092 1604 aaPredicted RBP11.87□□□□□ -0.51
FN1-210ENST00000438981 NHSL1Q5SYE7 1610 aa11.87□□□□□ -0.51
FN1-210ENST00000438981 DCCP43146 1447 aa11.86□□□□□ -0.51
FN1-210ENST00000438981 HSPA1LP34931 641 aa11.86□□□□□ -0.51
FN1-210ENST00000438981 ANKRD30BQ9BXX2 1392 aa11.86□□□□□ -0.51
FN1-210ENST00000438981 AHDC1Q5TGY3 1603 aaPredicted RBP11.86□□□□□ -0.51
FN1-210ENST00000438981 FAM135BQ49AJ0 1406 aa11.85□□□□□ -0.51
FN1-210ENST00000438981 ADGRL3Q9HAR2 1447 aa11.85□□□□□ -0.51
FN1-210ENST00000438981 CDC42BPGQ6DT37 1551 aa11.84□□□□□ -0.51
FN1-210ENST00000438981 AMOTL2Q9Y2J4 779 aa11.84□□□□□ -0.51
FN1-210ENST00000438981 ADGRF5Q8IZF2 1346 aa11.84□□□□□ -0.51
FN1-210ENST00000438981 VGFO15240 615 aaPredicted RBP11.83□□□□□ -0.52
FN1-210ENST00000438981 HRCP23327 699 aa11.83□□□□□ -0.52
FN1-210ENST00000438981 SHPRHQ149N8 1683 aa11.83□□□□□ -0.52
FN1-210ENST00000438981 TECPR2O15040 1411 aa11.83□□□□□ -0.52
FN1-210ENST00000438981 ROBO2Q9HCK4 1378 aa11.82□□□□□ -0.52
FN1-210ENST00000438981 FMN2Q9NZ56 1722 aa11.82□□□□□ -0.52
FN1-210ENST00000438981 ARHGEF28Q8N1W1 1705 aaKnown RBP11.81□□□□□ -0.52
FN1-210ENST00000438981 ADGRB1O14514 1584 aa11.81□□□□□ -0.52
FN1-210ENST00000438981 MST1RQ04912 1400 aa11.81□□□□□ -0.52
FN1-210ENST00000438981 RGL3Q3MIN7 710 aa11.81□□□□□ -0.52
FN1-210ENST00000438981 KIAA1210Q9ULL0 1709 aa11.8□□□□□ -0.52
FN1-210ENST00000438981 C14orf37Q86TY3 774 aa11.79□□□□□ -0.52
FN1-210ENST00000438981 RGPD8O14715 1765 aaPredicted RBP11.79□□□□□ -0.52
FN1-210ENST00000438981 DISP3Q9P2K9 1392 aa11.79□□□□□ -0.52
FN1-210ENST00000438981 YTHDC2Q9H6S0 1430 aaKnown RBP11.77□□□□□ -0.52
FN1-210ENST00000438981 DLC1Q96QB1 1528 aa11.77□□□□□ -0.52
FN1-210ENST00000438981 ADGRB2O60241 1585 aa11.77□□□□□ -0.53
FN1-210ENST00000438981 CADPS2Q86UW7 1296 aa11.77□□□□□ -0.53
FN1-210ENST00000438981 C19orf44Q9H6X5 657 aa11.77□□□□□ -0.53
FN1-210ENST00000438981 SLAIN2Q9P270 581 aa11.77□□□□□ -0.53
FN1-210ENST00000438981 LRPPRCP42704 1394 aaKnown RBP11.77□□□□□ -0.53
FN1-210ENST00000438981 KIF1AQ12756 1690 aa11.75□□□□□ -0.53
FN1-210ENST00000438981 ATF3P18847 181 aa11.75□□□□□ -0.53
FN1-210ENST00000438981 DHX57Q6P158 1386 aaKnown RBP11.75□□□□□ -0.53
FN1-210ENST00000438981 C1orf167Q5SNV9 1468 aa11.75□□□□□ -0.53
FN1-210ENST00000438981 PLEKHH1Q9ULM0 1364 aa11.74□□□□□ -0.53
FN1-210ENST00000438981 USP32Q8NFA0 1604 aa11.74□□□□□ -0.53
FN1-210ENST00000438981 TRPM1Q7Z4N2 1603 aa11.73□□□□□ -0.53
FN1-210ENST00000438981 ABCC11Q96J66 1382 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms