RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 COG3Q96JB2 828 aa13.76□□□□□ -0.21
SEMA4D-211ENST00000438547 STAC3Q96MF2 364 aa13.76□□□□□ -0.21
SEMA4D-211ENST00000438547 RAD54L2Q9Y4B4 1467 aa13.76□□□□□ -0.21
SEMA4D-211ENST00000438547 ZNF330Q9Y3S2 320 aaPredicted RBP13.75□□□□□ -0.21
SEMA4D-211ENST00000438547 KIF3AQ9Y496 699 aa13.75□□□□□ -0.21
SEMA4D-211ENST00000438547 AKNAQ7Z591 1439 aa13.75□□□□□ -0.21
SEMA4D-211ENST00000438547 FYCO1Q9BQS8 1478 aa13.75□□□□□ -0.21
SEMA4D-211ENST00000438547 ERICH3Q5RHP9 1530 aa13.75□□□□□ -0.21
SEMA4D-211ENST00000438547 NBPF8Q3BBV2 869 aa13.75□□□□□ -0.21
SEMA4D-211ENST00000438547 MINK1Q8N4C8 1332 aaPredicted RBP13.75□□□□□ -0.21
SEMA4D-211ENST00000438547 PNISRQ8TF01 805 aaKnown RBP13.75□□□□□ -0.21
SEMA4D-211ENST00000438547 CCDC34Q96HJ3 373 aa13.74□□□□□ -0.21
SEMA4D-211ENST00000438547 BACH2Q9BYV9 841 aa13.74□□□□□ -0.21
SEMA4D-211ENST00000438547 CCDC184Q52MB2 194 aa13.73□□□□□ -0.21
SEMA4D-211ENST00000438547 NUCB2P80303 420 aa13.73□□□□□ -0.21
SEMA4D-211ENST00000438547 SF3A1Q15459 793 aaKnown RBP13.73□□□□□ -0.21
SEMA4D-211ENST00000438547 FRAT2O75474 233 aaPredicted RBP13.72□□□□□ -0.21
SEMA4D-211ENST00000438547 FAM43AQ8N2R8 423 aa13.72□□□□□ -0.21
SEMA4D-211ENST00000438547 PPP2R1AP30153 589 aa13.71□□□□□ -0.21
SEMA4D-211ENST00000438547 MRE11P49959 708 aa13.71□□□□□ -0.21
SEMA4D-211ENST00000438547 TAF7LQ5H9L4 462 aa13.71□□□□□ -0.21
SEMA4D-211ENST00000438547 H3BQV1 296 aa13.7□□□□□ -0.22
SEMA4D-211ENST00000438547 IFFO2Q5TF58 517 aa13.7□□□□□ -0.22
SEMA4D-211ENST00000438547 DIAPH3Q9NSV4 1193 aa13.7□□□□□ -0.22
SEMA4D-211ENST00000438547 GOLGA6L19H0YKK7 550 aa13.7□□□□□ -0.22
SEMA4D-211ENST00000438547 INTS3Q68E01 1043 aaKnown RBP13.7□□□□□ -0.22
SEMA4D-211ENST00000438547 TCP11L2Q8N4U5 519 aa13.7□□□□□ -0.22
SEMA4D-211ENST00000438547 IL27Q8NEV9 243 aa13.7□□□□□ -0.22
SEMA4D-211ENST00000438547 BRPF3Q9ULD4 1205 aa13.7□□□□□ -0.22
SEMA4D-211ENST00000438547 EID1Q9Y6B2 187 aa13.7□□□□□ -0.22
SEMA4D-211ENST00000438547 BECN2A8MW95 431 aa13.69□□□□□ -0.22
SEMA4D-211ENST00000438547 FAM184AQ8NB25 1140 aa13.69□□□□□ -0.22
SEMA4D-211ENST00000438547 ANO2Q9NQ90 1003 aa13.69□□□□□ -0.22
SEMA4D-211ENST00000438547 SMG6Q86US8 1419 aaKnown RBP13.69□□□□□ -0.22
SEMA4D-211ENST00000438547 GNAI1P63096 354 aa13.69□□□□□ -0.22
SEMA4D-211ENST00000438547 CFTRP13569 1480 aa13.68□□□□□ -0.22
SEMA4D-211ENST00000438547 SYNJ1O43426 1573 aa13.68□□□□□ -0.22
SEMA4D-211ENST00000438547 PDE3AQ14432 1141 aa13.68□□□□□ -0.22
SEMA4D-211ENST00000438547 RUFY2Q8WXA3 655 aa13.68□□□□□ -0.22
SEMA4D-211ENST00000438547 PRXQ9BXM0 1461 aa13.68□□□□□ -0.22
SEMA4D-211ENST00000438547 TRAK2O60296 914 aa13.68□□□□□ -0.22
SEMA4D-211ENST00000438547 MCTP1Q6DN14 999 aa13.68□□□□□ -0.22
SEMA4D-211ENST00000438547 WDR97A6NE52 1622 aa13.68□□□□□ -0.22
SEMA4D-211ENST00000438547 TNNT3P45378 269 aaPredicted RBP13.68□□□□□ -0.22
SEMA4D-211ENST00000438547 FAM13BQ9NYF5 915 aa13.68□□□□□ -0.22
SEMA4D-211ENST00000438547 ZKSCAN1P17029 563 aaPredicted RBP13.67□□□□□ -0.22
SEMA4D-211ENST00000438547 MTHFSP49914 203 aa13.67□□□□□ -0.22
SEMA4D-211ENST00000438547 NBPF1Q3BBV0 1214 aa13.67□□□□□ -0.22
SEMA4D-211ENST00000438547 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.67□□□□□ -0.22
SEMA4D-211ENST00000438547 ISY1Q9ULR0 285 aaKnown RBP13.67□□□□□ -0.22
SEMA4D-211ENST00000438547 HFM1A2PYH4 1435 aa13.67□□□□□ -0.22
SEMA4D-211ENST00000438547 ROCK1Q13464 1354 aa13.67□□□□□ -0.22
SEMA4D-211ENST00000438547 PDZRN3Q9UPQ7 1066 aa13.67□□□□□ -0.22
SEMA4D-211ENST00000438547 GGNBP2Q9H3C7 697 aa13.66□□□□□ -0.22
SEMA4D-211ENST00000438547 CDC45O75419 566 aa13.66□□□□□ -0.22
SEMA4D-211ENST00000438547 CHMP4CQ96CF2 233 aa13.65□□□□□ -0.22
SEMA4D-211ENST00000438547 TEFQ10587 303 aa13.65□□□□□ -0.22
SEMA4D-211ENST00000438547 BCAR3O75815 825 aa13.65□□□□□ -0.22
SEMA4D-211ENST00000438547 PKNOX2Q96KN3 472 aa13.65□□□□□ -0.22
SEMA4D-211ENST00000438547 FKBP5Q13451 457 aaPredicted RBP13.64□□□□□ -0.23
SEMA4D-211ENST00000438547 HMOX1P09601 288 aa13.64□□□□□ -0.23
SEMA4D-211ENST00000438547 NASPP49321 788 aaPredicted RBP13.64□□□□□ -0.23
SEMA4D-211ENST00000438547 EIF2S2P20042 333 aaKnown RBP13.64□□□□□ -0.23
SEMA4D-211ENST00000438547 GOLGA6L1Q8N7Z2 621 aa13.64□□□□□ -0.23
SEMA4D-211ENST00000438547 C9orf78Q9NZ63 289 aaPredicted RBP13.64□□□□□ -0.23
SEMA4D-211ENST00000438547 TOMM22Q9NS69 142 aa13.63□□□□□ -0.23
SEMA4D-211ENST00000438547 NECTIN2Q92692 538 aa13.63□□□□□ -0.23
SEMA4D-211ENST00000438547 CFAP70Q5T0N1 1121 aa13.63□□□□□ -0.23
SEMA4D-211ENST00000438547 CREBRFQ8IUR6 639 aa13.63□□□□□ -0.23
SEMA4D-211ENST00000438547 CCDC9Q9Y3X0 531 aaKnown RBP13.62□□□□□ -0.23
SEMA4D-211ENST00000438547 KIAA1107Q9UPP5 1409 aa13.62□□□□□ -0.23
SEMA4D-211ENST00000438547 NCAPD3P42695 1498 aa13.62□□□□□ -0.23
SEMA4D-211ENST00000438547 SMC3Q9UQE7 1217 aa13.62□□□□□ -0.23
SEMA4D-211ENST00000438547 RASSF8Q8NHQ8 419 aa13.62□□□□□ -0.23
SEMA4D-211ENST00000438547 TPM3P06753 285 aa13.62□□□□□ -0.23
SEMA4D-211ENST00000438547 IFIT2P09913 472 aaKnown RBP13.62□□□□□ -0.23
SEMA4D-211ENST00000438547 EXOSC9Q06265 439 aaKnown RBP13.62□□□□□ -0.23
SEMA4D-211ENST00000438547 VPS37CA5D8V6 355 aaPredicted RBP13.61□□□□□ -0.23
SEMA4D-211ENST00000438547 TMEM132EQ6IEE7 984 aa13.61□□□□□ -0.23
SEMA4D-211ENST00000438547 ZNF592Q92610 1267 aa13.61□□□□□ -0.23
SEMA4D-211ENST00000438547 MSH5O43196 834 aa13.61□□□□□ -0.23
SEMA4D-211ENST00000438547 CABP2Q9NPB3 220 aa13.61□□□□□ -0.23
SEMA4D-211ENST00000438547 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.61□□□□□ -0.23
SEMA4D-211ENST00000438547 TRHP20396 242 aaPredicted RBP13.6□□□□□ -0.23
SEMA4D-211ENST00000438547 BICD2Q8TD16 824 aa13.6□□□□□ -0.23
SEMA4D-211ENST00000438547 NEXNQ0ZGT2 675 aa13.6□□□□□ -0.23
SEMA4D-211ENST00000438547 C1orf141Q5JVX7 400 aa13.6□□□□□ -0.23
SEMA4D-211ENST00000438547 TIAM1Q13009 1591 aa13.6□□□□□ -0.23
SEMA4D-211ENST00000438547 RNF20Q5VTR2 975 aa13.59□□□□□ -0.23
SEMA4D-211ENST00000438547 TSPYL4Q9UJ04 414 aa13.59□□□□□ -0.23
SEMA4D-211ENST00000438547 NOC3LQ8WTT2 800 aaKnown RBP13.59□□□□□ -0.23
SEMA4D-211ENST00000438547 RNF214Q8ND24 703 aa13.58□□□□□ -0.24
SEMA4D-211ENST00000438547 R3HCC1Q9Y3T6 440 aaKnown RBP13.58□□□□□ -0.24
SEMA4D-211ENST00000438547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.58□□□□□ -0.24
SEMA4D-211ENST00000438547 CAVIN1Q6NZI2 390 aaKnown RBP13.58□□□□□ -0.24
SEMA4D-211ENST00000438547 AQRO60306 1485 aaKnown RBP eCLIP13.58□□□□□ -0.24
SEMA4D-211ENST00000438547 CPLX2Q6PUV4 134 aaKnown RBP13.58□□□□□ -0.24
SEMA4D-211ENST00000438547 CCAR2Q8N163 923 aaKnown RBP13.57□□□□□ -0.24
SEMA4D-211ENST00000438547 CLSTN1O94985 981 aa13.57□□□□□ -0.24
SEMA4D-211ENST00000438547 HSP90AB4PQ58FF6 505 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms