RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 TRPM2O94759 1503 aa24.15■■□□□ 1.46
CTSD-205ENST00000438213 ZNF335Q9H4Z2 1342 aaPredicted RBP24.13■■□□□ 1.45
CTSD-205ENST00000438213 ZFYVE9O95405 1425 aa24.1■■□□□ 1.45
CTSD-205ENST00000438213 IQGAP1P46940 1657 aa24.1■■□□□ 1.45
CTSD-205ENST00000438213 CCDC144AA2RUR9 1427 aa24.09■■□□□ 1.45
CTSD-205ENST00000438213 MYO5BQ9ULV0 1848 aa24.08■■□□□ 1.45
CTSD-205ENST00000438213 NUTM2DQ5VT03 806 aaPredicted RBP24.08■■□□□ 1.45
CTSD-205ENST00000438213 CLTCL1P53675 1640 aa24.08■■□□□ 1.45
CTSD-205ENST00000438213 PLEKHG1Q9ULL1 1385 aa24.06■■□□□ 1.44
CTSD-205ENST00000438213 SLC26A8Q96RN1 970 aa24.06■■□□□ 1.44
CTSD-205ENST00000438213 RPGRIP1LQ68CZ1 1315 aa24.06■■□□□ 1.44
CTSD-205ENST00000438213 LTBP4Q8N2S1 1624 aa24.05■■□□□ 1.44
CTSD-205ENST00000438213 KIF1BO60333 1816 aa24.03■■□□□ 1.44
CTSD-205ENST00000438213 VGFO15240 615 aaPredicted RBP24.03■■□□□ 1.44
CTSD-205ENST00000438213 SENP3Q9H4L4 574 aaPredicted RBP24.03■■□□□ 1.44
CTSD-205ENST00000438213 TBX22Q9Y458 520 aa24.02■■□□□ 1.44
CTSD-205ENST00000438213 FBXO41Q8TF61 875 aa24.01■■□□□ 1.43
CTSD-205ENST00000438213 RGL3Q3MIN7 710 aa24■■□□□ 1.43
CTSD-205ENST00000438213 KCNA6P17658 529 aa23.98■■□□□ 1.43
CTSD-205ENST00000438213 ANKRD30BQ9BXX2 1392 aa23.98■■□□□ 1.43
CTSD-205ENST00000438213 CPS1P31327 1500 aa23.98■■□□□ 1.43
CTSD-205ENST00000438213 IQSEC2Q5JU85 1478 aa23.95■■□□□ 1.42
CTSD-205ENST00000438213 ILDR1Q86SU0 546 aaPredicted RBP23.93■■□□□ 1.42
CTSD-205ENST00000438213 SPATA31E1Q6ZUB1 1445 aa23.93■■□□□ 1.42
CTSD-205ENST00000438213 NEXMIFQ5QGS0 1516 aa23.92■■□□□ 1.42
CTSD-205ENST00000438213 ADAMTS13Q76LX8 1427 aa23.91■■□□□ 1.42
CTSD-205ENST00000438213 PIK3R4Q99570 1358 aa23.9■■□□□ 1.42
CTSD-205ENST00000438213 PROSER2Q86WR7 435 aaPredicted RBP23.89■■□□□ 1.41
CTSD-205ENST00000438213 DIP2AQ14689 1571 aa23.86■■□□□ 1.41
CTSD-205ENST00000438213 UBAP1LF5GYI3 381 aa23.86■■□□□ 1.41
CTSD-205ENST00000438213 LRRC7Q96NW7 1537 aa23.85■■□□□ 1.41
CTSD-205ENST00000438213 SETBP1Q9Y6X0 1596 aa23.85■■□□□ 1.41
CTSD-205ENST00000438213 STRCP1A6NGW2 1772 aa23.84■■□□□ 1.41
CTSD-205ENST00000438213 TOM1O60784 492 aa23.84■■□□□ 1.41
CTSD-205ENST00000438213 AMOTL2Q9Y2J4 779 aa23.84■■□□□ 1.41
CTSD-205ENST00000438213 ADGRF5Q8IZF2 1346 aa23.83■■□□□ 1.4
CTSD-205ENST00000438213 STAC3Q96MF2 364 aa23.82■■□□□ 1.4
CTSD-205ENST00000438213 PPLO60437 1756 aa23.81■■□□□ 1.4
CTSD-205ENST00000438213 NKTRP30414 1462 aaKnown RBP23.8■■□□□ 1.4
CTSD-205ENST00000438213 CHD2O14647 1828 aaKnown RBP23.8■■□□□ 1.4
CTSD-205ENST00000438213 METP08581 1390 aa23.79■■□□□ 1.4
CTSD-205ENST00000438213 TMEM94Q12767 1356 aa23.79■■□□□ 1.4
CTSD-205ENST00000438213 DCAF11Q8TEB1 546 aa23.78■■□□□ 1.4
CTSD-205ENST00000438213 NWD1Q149M9 1564 aa23.78■■□□□ 1.4
CTSD-205ENST00000438213 NRXN3Q9Y4C0 1643 aa23.77■■□□□ 1.4
CTSD-205ENST00000438213 RBM33Q96EV2 1170 aaKnown RBP23.76■■□□□ 1.39
CTSD-205ENST00000438213 PCGF6Q9BYE7 350 aa23.76■■□□□ 1.39
CTSD-205ENST00000438213 KDM2AQ9Y2K7 1162 aa23.76■■□□□ 1.39
CTSD-205ENST00000438213 DHX57Q6P158 1386 aaKnown RBP23.75■■□□□ 1.39
CTSD-205ENST00000438213 PTPRUQ92729 1446 aa23.75■■□□□ 1.39
CTSD-205ENST00000438213 ALKQ9UM73 1620 aa23.74■■□□□ 1.39
CTSD-205ENST00000438213 C14orf37Q86TY3 774 aa23.74■■□□□ 1.39
CTSD-205ENST00000438213 NCOA3Q9Y6Q9 1424 aa23.73■■□□□ 1.39
CTSD-205ENST00000438213 C14orf93Q9H972 538 aaKnown RBP23.72■■□□□ 1.39
CTSD-205ENST00000438213 IFT172Q9UG01 1749 aa23.71■■□□□ 1.39
CTSD-205ENST00000438213 MYOM2P54296 1465 aa23.71■■□□□ 1.39
CTSD-205ENST00000438213 SCAF1Q9H7N4 1312 aaKnown RBP23.71■■□□□ 1.39
CTSD-205ENST00000438213 PIP4K2BP78356 416 aa23.71■■□□□ 1.39
CTSD-205ENST00000438213 PIK3C2GO75747 1445 aa23.7■■□□□ 1.38
CTSD-205ENST00000438213 MSH6P52701 1360 aa23.7■■□□□ 1.38
CTSD-205ENST00000438213 NEUROD1Q13562 356 aa23.69■■□□□ 1.38
CTSD-205ENST00000438213 SIN3AQ96ST3 1273 aa23.69■■□□□ 1.38
CTSD-205ENST00000438213 C19orf44Q9H6X5 657 aa23.69■■□□□ 1.38
CTSD-205ENST00000438213 CFAP70Q5T0N1 1121 aa23.68■■□□□ 1.38
CTSD-205ENST00000438213 TMEM132EQ6IEE7 984 aa23.67■■□□□ 1.38
CTSD-205ENST00000438213 NRXN1Q9ULB1 1477 aa23.67■■□□□ 1.38
CTSD-205ENST00000438213 STK26Q9P289 416 aa23.65■■□□□ 1.38
CTSD-205ENST00000438213 XIRP1Q702N8 1843 aaKnown RBP23.65■■□□□ 1.38
CTSD-205ENST00000438213 ATF3P18847 181 aa23.64■■□□□ 1.37
CTSD-205ENST00000438213 CADPS2Q86UW7 1296 aa23.63■■□□□ 1.37
CTSD-205ENST00000438213 XRN1Q8IZH2 1706 aaKnown RBP23.63■■□□□ 1.37
CTSD-205ENST00000438213 LRPPRCP42704 1394 aaKnown RBP23.63■■□□□ 1.37
CTSD-205ENST00000438213 SETD1AO15047 1707 aaKnown RBP23.62■■□□□ 1.37
CTSD-205ENST00000438213 L3MBTL2Q969R5 705 aa23.61■■□□□ 1.37
CTSD-205ENST00000438213 SLAIN2Q9P270 581 aa23.61■■□□□ 1.37
CTSD-205ENST00000438213 ABCC11Q96J66 1382 aa23.61■■□□□ 1.37
CTSD-205ENST00000438213 ROBO2Q9HCK4 1378 aa23.6■■□□□ 1.37
CTSD-205ENST00000438213 PTCH1Q13635 1447 aa23.59■■□□□ 1.37
CTSD-205ENST00000438213 SIRT1Q96EB6 747 aa23.59■■□□□ 1.37
CTSD-205ENST00000438213 PRAG1Q86YV5 1406 aa23.58■■□□□ 1.36
CTSD-205ENST00000438213 YTHDC2Q9H6S0 1430 aaKnown RBP23.58■■□□□ 1.36
CTSD-205ENST00000438213 LAMC1P11047 1609 aa23.55■■□□□ 1.36
CTSD-205ENST00000438213 FAM135BQ49AJ0 1406 aa23.55■■□□□ 1.36
CTSD-205ENST00000438213 TECPR2O15040 1411 aa23.54■■□□□ 1.36
CTSD-205ENST00000438213 WAPLQ7Z5K2 1190 aa23.54■■□□□ 1.36
CTSD-205ENST00000438213 DCCP43146 1447 aa23.53■■□□□ 1.36
CTSD-205ENST00000438213 ADGRL3Q9HAR2 1447 aa23.53■■□□□ 1.36
CTSD-205ENST00000438213 HSPA1LP34931 641 aa23.52■■□□□ 1.36
CTSD-205ENST00000438213 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.51■■□□□ 1.35
CTSD-205ENST00000438213 ASXL1Q8IXJ9 1541 aa23.51■■□□□ 1.35
CTSD-205ENST00000438213 POGKQ9P215 609 aa23.5■■□□□ 1.35
CTSD-205ENST00000438213 TRAK1Q9UPV9 953 aa23.5■■□□□ 1.35
CTSD-205ENST00000438213 TONSLQ96HA7 1378 aa23.49■■□□□ 1.35
CTSD-205ENST00000438213 PRAM1Q96QH2 718 aa23.47■■□□□ 1.35
CTSD-205ENST00000438213 CLSPNQ9HAW4 1339 aa23.47■■□□□ 1.35
CTSD-205ENST00000438213 ADGRB1O14514 1584 aa23.45■■□□□ 1.34
CTSD-205ENST00000438213 PLEKHH1Q9ULM0 1364 aa23.44■■□□□ 1.34
CTSD-205ENST00000438213 NBPF1Q3BBV0 1214 aa23.44■■□□□ 1.34
CTSD-205ENST00000438213 KNDC1Q76NI1 1749 aa23.44■■□□□ 1.34
CTSD-205ENST00000438213 SAFB2Q14151 953 aaKnown RBP eCLIP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms