RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.56■■□□□ 1.84
NCSTN-208ENST00000438008 MPHOSPH9Q99550 1183 aa26.54■■□□□ 1.84
NCSTN-208ENST00000438008 MYO5BQ9ULV0 1848 aa26.53■■□□□ 1.84
NCSTN-208ENST00000438008 RAB3GAP2Q9H2M9 1393 aa26.52■■□□□ 1.84
NCSTN-208ENST00000438008 PLEKHG1Q9ULL1 1385 aa26.52■■□□□ 1.84
NCSTN-208ENST00000438008 PPP1R15AO75807 674 aaPredicted RBP26.5■■□□□ 1.83
NCSTN-208ENST00000438008 CLTCL1P53675 1640 aa26.5■■□□□ 1.83
NCSTN-208ENST00000438008 HRCP23327 699 aa26.48■■□□□ 1.83
NCSTN-208ENST00000438008 FOXD1Q16676 465 aa26.47■■□□□ 1.83
NCSTN-208ENST00000438008 SLC26A8Q96RN1 970 aa26.47■■□□□ 1.83
NCSTN-208ENST00000438008 BCANQ96GW7 911 aa26.45■■□□□ 1.82
NCSTN-208ENST00000438008 STRCP1A6NGW2 1772 aa26.43■■□□□ 1.82
NCSTN-208ENST00000438008 ZNF326Q5BKZ1 582 aaKnown RBP26.43■■□□□ 1.82
NCSTN-208ENST00000438008 NUTM2DQ5VT03 806 aaPredicted RBP26.43■■□□□ 1.82
NCSTN-208ENST00000438008 KCNA6P17658 529 aa26.42■■□□□ 1.82
NCSTN-208ENST00000438008 TBX22Q9Y458 520 aa26.42■■□□□ 1.82
NCSTN-208ENST00000438008 LRRC7Q96NW7 1537 aa26.41■■□□□ 1.82
NCSTN-208ENST00000438008 ADAMTS13Q76LX8 1427 aa26.39■■□□□ 1.82
NCSTN-208ENST00000438008 KIF1BO60333 1816 aa26.38■■□□□ 1.81
NCSTN-208ENST00000438008 CCDC144AA2RUR9 1427 aa26.38■■□□□ 1.81
NCSTN-208ENST00000438008 UBAP1LF5GYI3 381 aa26.37■■□□□ 1.81
NCSTN-208ENST00000438008 RPGRIP1LQ68CZ1 1315 aa26.37■■□□□ 1.81
NCSTN-208ENST00000438008 NEXMIFQ5QGS0 1516 aa26.36■■□□□ 1.81
NCSTN-208ENST00000438008 SENP3Q9H4L4 574 aaPredicted RBP26.36■■□□□ 1.81
NCSTN-208ENST00000438008 DIP2AQ14689 1571 aa26.35■■□□□ 1.81
NCSTN-208ENST00000438008 PIK3R4Q99570 1358 aa26.33■■□□□ 1.81
NCSTN-208ENST00000438008 NWD1Q149M9 1564 aa26.33■■□□□ 1.81
NCSTN-208ENST00000438008 TOM1O60784 492 aa26.32■■□□□ 1.8
NCSTN-208ENST00000438008 SETBP1Q9Y6X0 1596 aa26.32■■□□□ 1.8
NCSTN-208ENST00000438008 NKTRP30414 1462 aaKnown RBP26.31■■□□□ 1.8
NCSTN-208ENST00000438008 VGFO15240 615 aaPredicted RBP26.31■■□□□ 1.8
NCSTN-208ENST00000438008 SPATA31E1Q6ZUB1 1445 aa26.3■■□□□ 1.8
NCSTN-208ENST00000438008 PROSER2Q86WR7 435 aaPredicted RBP26.28■■□□□ 1.8
NCSTN-208ENST00000438008 NRXN3Q9Y4C0 1643 aa26.28■■□□□ 1.8
NCSTN-208ENST00000438008 TMEM94Q12767 1356 aa26.27■■□□□ 1.8
NCSTN-208ENST00000438008 CHD2O14647 1828 aaKnown RBP26.26■■□□□ 1.79
NCSTN-208ENST00000438008 ANKRD30BQ9BXX2 1392 aa26.25■■□□□ 1.79
NCSTN-208ENST00000438008 ALKQ9UM73 1620 aa26.22■■□□□ 1.79
NCSTN-208ENST00000438008 RGL3Q3MIN7 710 aa26.22■■□□□ 1.79
NCSTN-208ENST00000438008 PTPRUQ92729 1446 aa26.22■■□□□ 1.79
NCSTN-208ENST00000438008 XIRP1Q702N8 1843 aaKnown RBP26.21■■□□□ 1.79
NCSTN-208ENST00000438008 AMOTL2Q9Y2J4 779 aa26.21■■□□□ 1.79
NCSTN-208ENST00000438008 METP08581 1390 aa26.2■■□□□ 1.79
NCSTN-208ENST00000438008 NCOA3Q9Y6Q9 1424 aa26.2■■□□□ 1.78
NCSTN-208ENST00000438008 PPLO60437 1756 aa26.2■■□□□ 1.78
NCSTN-208ENST00000438008 PIP4K2BP78356 416 aa26.18■■□□□ 1.78
NCSTN-208ENST00000438008 RBM33Q96EV2 1170 aaKnown RBP26.18■■□□□ 1.78
NCSTN-208ENST00000438008 ADGRF5Q8IZF2 1346 aa26.15■■□□□ 1.78
NCSTN-208ENST00000438008 SCAF1Q9H7N4 1312 aaKnown RBP26.14■■□□□ 1.78
NCSTN-208ENST00000438008 MSH6P52701 1360 aa26.13■■□□□ 1.77
NCSTN-208ENST00000438008 XRN1Q8IZH2 1706 aaKnown RBP26.13■■□□□ 1.77
NCSTN-208ENST00000438008 IFT172Q9UG01 1749 aa26.11■■□□□ 1.77
NCSTN-208ENST00000438008 SETD1AO15047 1707 aaKnown RBP26.09■■□□□ 1.77
NCSTN-208ENST00000438008 TRIM26Q12899 539 aaPredicted RBP26.09■■□□□ 1.77
NCSTN-208ENST00000438008 PIK3C2GO75747 1445 aa26.07■■□□□ 1.76
NCSTN-208ENST00000438008 C19orf44Q9H6X5 657 aa26.07■■□□□ 1.76
NCSTN-208ENST00000438008 PRAG1Q86YV5 1406 aa26.06■■□□□ 1.76
NCSTN-208ENST00000438008 MYOM2P54296 1465 aa26.06■■□□□ 1.76
NCSTN-208ENST00000438008 HSPA1LP34931 641 aa26.06■■□□□ 1.76
NCSTN-208ENST00000438008 FAM135BQ49AJ0 1406 aa26.05■■□□□ 1.76
NCSTN-208ENST00000438008 NRXN1Q9ULB1 1477 aa26.05■■□□□ 1.76
NCSTN-208ENST00000438008 C14orf37Q86TY3 774 aa26.05■■□□□ 1.76
NCSTN-208ENST00000438008 PTCH1Q13635 1447 aa26.03■■□□□ 1.76
NCSTN-208ENST00000438008 CADPS2Q86UW7 1296 aa26.02■■□□□ 1.76
NCSTN-208ENST00000438008 STAC3Q96MF2 364 aa26.02■■□□□ 1.76
NCSTN-208ENST00000438008 SLAIN2Q9P270 581 aa26.02■■□□□ 1.76
NCSTN-208ENST00000438008 C14orf93Q9H972 538 aaKnown RBP26.01■■□□□ 1.75
NCSTN-208ENST00000438008 DCCP43146 1447 aa25.99■■□□□ 1.75
NCSTN-208ENST00000438008 ROBO2Q9HCK4 1378 aa25.99■■□□□ 1.75
NCSTN-208ENST00000438008 ATF3P18847 181 aa25.99■■□□□ 1.75
NCSTN-208ENST00000438008 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.97■■□□□ 1.75
NCSTN-208ENST00000438008 LRPPRCP42704 1394 aaKnown RBP25.96■■□□□ 1.75
NCSTN-208ENST00000438008 DHX57Q6P158 1386 aaKnown RBP25.96■■□□□ 1.75
NCSTN-208ENST00000438008 DCAF11Q8TEB1 546 aa25.96■■□□□ 1.75
NCSTN-208ENST00000438008 ADGRL3Q9HAR2 1447 aa25.96■■□□□ 1.75
NCSTN-208ENST00000438008 ASXL1Q8IXJ9 1541 aa25.95■■□□□ 1.74
NCSTN-208ENST00000438008 TECPR2O15040 1411 aa25.95■■□□□ 1.74
NCSTN-208ENST00000438008 ABCC11Q96J66 1382 aa25.95■■□□□ 1.74
NCSTN-208ENST00000438008 CFAP70Q5T0N1 1121 aa25.94■■□□□ 1.74
NCSTN-208ENST00000438008 TMEM132EQ6IEE7 984 aa25.94■■□□□ 1.74
NCSTN-208ENST00000438008 KDM2AQ9Y2K7 1162 aa25.92■■□□□ 1.74
NCSTN-208ENST00000438008 ROBO1Q9Y6N7 1651 aa25.91■■□□□ 1.74
NCSTN-208ENST00000438008 LAMC1P11047 1609 aa25.91■■□□□ 1.74
NCSTN-208ENST00000438008 YTHDC2Q9H6S0 1430 aaKnown RBP25.9■■□□□ 1.74
NCSTN-208ENST00000438008 STK26Q9P289 416 aa25.9■■□□□ 1.74
NCSTN-208ENST00000438008 SIRT1Q96EB6 747 aa25.89■■□□□ 1.74
NCSTN-208ENST00000438008 MST1RQ04912 1400 aa25.87■■□□□ 1.73
NCSTN-208ENST00000438008 NALCNQ8IZF0 1738 aa25.86■■□□□ 1.73
NCSTN-208ENST00000438008 KNDC1Q76NI1 1749 aa25.85■■□□□ 1.73
NCSTN-208ENST00000438008 WAPLQ7Z5K2 1190 aa25.84■■□□□ 1.73
NCSTN-208ENST00000438008 BRINP3Q76B58 766 aa25.83■■□□□ 1.73
NCSTN-208ENST00000438008 ADGRB1O14514 1584 aa25.82■■□□□ 1.72
NCSTN-208ENST00000438008 SIN3AQ96ST3 1273 aa25.81■■□□□ 1.72
NCSTN-208ENST00000438008 PLEKHH1Q9ULM0 1364 aa25.81■■□□□ 1.72
NCSTN-208ENST00000438008 C1orf167Q5SNV9 1468 aa25.78■■□□□ 1.72
NCSTN-208ENST00000438008 DLC1Q96QB1 1528 aa25.78■■□□□ 1.72
NCSTN-208ENST00000438008 CDC42BPGQ6DT37 1551 aa25.77■■□□□ 1.72
NCSTN-208ENST00000438008 L3MBTL2Q969R5 705 aa25.76■■□□□ 1.71
NCSTN-208ENST00000438008 AHDC1Q5TGY3 1603 aaPredicted RBP25.76■■□□□ 1.71
NCSTN-208ENST00000438008 DISP3Q9P2K9 1392 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms