RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 HFM1A2PYH4 1435 aa24.05■■□□□ 1.44
NUP50-210ENST00000434760 NKTRP30414 1462 aaKnown RBP24.05■■□□□ 1.44
NUP50-210ENST00000434760 CLTCL1P53675 1640 aa24.04■■□□□ 1.44
NUP50-210ENST00000434760 TRPM2O94759 1503 aa24.04■■□□□ 1.44
NUP50-210ENST00000434760 PLEKHG1Q9ULL1 1385 aa24.03■■□□□ 1.44
NUP50-210ENST00000434760 DIP2AQ14689 1571 aa24.03■■□□□ 1.44
NUP50-210ENST00000434760 NRXN3Q9Y4C0 1643 aa24■■□□□ 1.43
NUP50-210ENST00000434760 TOM1O60784 492 aa23.99■■□□□ 1.43
NUP50-210ENST00000434760 ADAMTS13Q76LX8 1427 aa23.97■■□□□ 1.43
NUP50-210ENST00000434760 SLC26A8Q96RN1 970 aa23.96■■□□□ 1.43
NUP50-210ENST00000434760 PIP4K2BP78356 416 aa23.95■■□□□ 1.42
NUP50-210ENST00000434760 KIF1BO60333 1816 aa23.95■■□□□ 1.42
NUP50-210ENST00000434760 SETBP1Q9Y6X0 1596 aa23.94■■□□□ 1.42
NUP50-210ENST00000434760 TMEM94Q12767 1356 aa23.93■■□□□ 1.42
NUP50-210ENST00000434760 DISP3Q9P2K9 1392 aa23.93■■□□□ 1.42
NUP50-210ENST00000434760 HSPA1LP34931 641 aa23.93■■□□□ 1.42
NUP50-210ENST00000434760 MED1Q15648 1581 aaPredicted RBP23.93■■□□□ 1.42
NUP50-210ENST00000434760 NEXMIFQ5QGS0 1516 aa23.93■■□□□ 1.42
NUP50-210ENST00000434760 SCAF1Q9H7N4 1312 aaKnown RBP23.92■■□□□ 1.42
NUP50-210ENST00000434760 KCNA6P17658 529 aa23.92■■□□□ 1.42
NUP50-210ENST00000434760 XRN1Q8IZH2 1706 aaKnown RBP23.91■■□□□ 1.42
NUP50-210ENST00000434760 ROBO1Q9Y6N7 1651 aa23.88■■□□□ 1.41
NUP50-210ENST00000434760 PPP1R15AO75807 674 aaPredicted RBP23.87■■□□□ 1.41
NUP50-210ENST00000434760 CHGAP10645 457 aaKnown RBP23.87■■□□□ 1.41
NUP50-210ENST00000434760 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.86■■□□□ 1.41
NUP50-210ENST00000434760 SETD1AO15047 1707 aaKnown RBP23.86■■□□□ 1.41
NUP50-210ENST00000434760 PIK3R4Q99570 1358 aa23.84■■□□□ 1.41
NUP50-210ENST00000434760 SENP3Q9H4L4 574 aaPredicted RBP23.84■■□□□ 1.41
NUP50-210ENST00000434760 NUTM2DQ5VT03 806 aaPredicted RBP23.83■■□□□ 1.41
NUP50-210ENST00000434760 PPLO60437 1756 aa23.83■■□□□ 1.4
NUP50-210ENST00000434760 HDGFP51858 240 aaKnown RBP23.82■■□□□ 1.4
NUP50-210ENST00000434760 TBX22Q9Y458 520 aa23.82■■□□□ 1.4
NUP50-210ENST00000434760 PTPRUQ92729 1446 aa23.82■■□□□ 1.4
NUP50-210ENST00000434760 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.81■■□□□ 1.4
NUP50-210ENST00000434760 FAM135BQ49AJ0 1406 aa23.8■■□□□ 1.4
NUP50-210ENST00000434760 ILDR2Q71H61 639 aa23.8■■□□□ 1.4
NUP50-210ENST00000434760 RBM33Q96EV2 1170 aaKnown RBP23.8■■□□□ 1.4
NUP50-210ENST00000434760 BCANQ96GW7 911 aa23.79■■□□□ 1.4
NUP50-210ENST00000434760 PROSER2Q86WR7 435 aaPredicted RBP23.78■■□□□ 1.4
NUP50-210ENST00000434760 NCOA3Q9Y6Q9 1424 aa23.77■■□□□ 1.4
NUP50-210ENST00000434760 IFT172Q9UG01 1749 aa23.77■■□□□ 1.4
NUP50-210ENST00000434760 MSH6P52701 1360 aa23.76■■□□□ 1.39
NUP50-210ENST00000434760 NALCNQ8IZF0 1738 aa23.73■■□□□ 1.39
NUP50-210ENST00000434760 TRIM52Q96A61 297 aa23.73■■□□□ 1.39
NUP50-210ENST00000434760 PHLPP1O60346 1717 aa23.72■■□□□ 1.39
NUP50-210ENST00000434760 SLC4A1APQ9BWU0 796 aaKnown RBP23.71■■□□□ 1.39
NUP50-210ENST00000434760 COL16A1Q07092 1604 aaPredicted RBP23.7■■□□□ 1.39
NUP50-210ENST00000434760 METP08581 1390 aa23.7■■□□□ 1.38
NUP50-210ENST00000434760 ZNF326Q5BKZ1 582 aaKnown RBP23.69■■□□□ 1.38
NUP50-210ENST00000434760 DCCP43146 1447 aa23.67■■□□□ 1.38
NUP50-210ENST00000434760 PRAG1Q86YV5 1406 aa23.67■■□□□ 1.38
NUP50-210ENST00000434760 AHDC1Q5TGY3 1603 aaPredicted RBP23.66■■□□□ 1.38
NUP50-210ENST00000434760 SPATA31E1Q6ZUB1 1445 aa23.66■■□□□ 1.38
NUP50-210ENST00000434760 AMOTL2Q9Y2J4 779 aa23.64■■□□□ 1.37
NUP50-210ENST00000434760 CCDC144AA2RUR9 1427 aa23.63■■□□□ 1.37
NUP50-210ENST00000434760 PTCH1Q13635 1447 aa23.63■■□□□ 1.37
NUP50-210ENST00000434760 FOXD1Q16676 465 aa23.63■■□□□ 1.37
NUP50-210ENST00000434760 SETD5Q9C0A6 1442 aa23.62■■□□□ 1.37
NUP50-210ENST00000434760 ADGRL3Q9HAR2 1447 aa23.61■■□□□ 1.37
NUP50-210ENST00000434760 NHSL1Q5SYE7 1610 aa23.61■■□□□ 1.37
NUP50-210ENST00000434760 SLAIN2Q9P270 581 aa23.6■■□□□ 1.37
NUP50-210ENST00000434760 ASXL1Q8IXJ9 1541 aa23.59■■□□□ 1.37
NUP50-210ENST00000434760 SHPRHQ149N8 1683 aa23.58■■□□□ 1.37
NUP50-210ENST00000434760 MPHOSPH9Q99550 1183 aa23.58■■□□□ 1.37
NUP50-210ENST00000434760 MST1RQ04912 1400 aa23.58■■□□□ 1.36
NUP50-210ENST00000434760 RPGRIP1LQ68CZ1 1315 aa23.58■■□□□ 1.36
NUP50-210ENST00000434760 RAB3GAP2Q9H2M9 1393 aa23.57■■□□□ 1.36
NUP50-210ENST00000434760 KNDC1Q76NI1 1749 aa23.57■■□□□ 1.36
NUP50-210ENST00000434760 C19orf44Q9H6X5 657 aa23.57■■□□□ 1.36
NUP50-210ENST00000434760 SOCS7O14512 581 aa23.56■■□□□ 1.36
NUP50-210ENST00000434760 CADPS2Q86UW7 1296 aa23.55■■□□□ 1.36
NUP50-210ENST00000434760 C14orf37Q86TY3 774 aa23.54■■□□□ 1.36
NUP50-210ENST00000434760 VGFO15240 615 aaPredicted RBP23.53■■□□□ 1.36
NUP50-210ENST00000434760 ROBO2Q9HCK4 1378 aa23.52■■□□□ 1.36
NUP50-210ENST00000434760 LAMC1P11047 1609 aa23.52■■□□□ 1.36
NUP50-210ENST00000434760 PIK3C2GO75747 1445 aa23.52■■□□□ 1.36
NUP50-210ENST00000434760 ATF3P18847 181 aa23.5■■□□□ 1.35
NUP50-210ENST00000434760 NRXN1Q9ULB1 1477 aa23.49■■□□□ 1.35
NUP50-210ENST00000434760 CDC42BPGQ6DT37 1551 aa23.49■■□□□ 1.35
NUP50-210ENST00000434760 ACIN1Q9UKV3 1341 aaKnown RBP23.49■■□□□ 1.35
NUP50-210ENST00000434760 ANKRD30BQ9BXX2 1392 aa23.49■■□□□ 1.35
NUP50-210ENST00000434760 JCADQ9P266 1359 aa23.49■■□□□ 1.35
NUP50-210ENST00000434760 TECPR2O15040 1411 aa23.49■■□□□ 1.35
NUP50-210ENST00000434760 MYOM2P54296 1465 aa23.49■■□□□ 1.35
NUP50-210ENST00000434760 LRP6O75581 1613 aa23.48■■□□□ 1.35
NUP50-210ENST00000434760 ADGRF5Q8IZF2 1346 aa23.48■■□□□ 1.35
NUP50-210ENST00000434760 BRINP3Q76B58 766 aa23.47■■□□□ 1.35
NUP50-210ENST00000434760 PHF23Q9BUL5 403 aaPredicted RBP23.47■■□□□ 1.35
NUP50-210ENST00000434760 RGS17Q9UGC6 210 aaPredicted RBP23.46■■□□□ 1.35
NUP50-210ENST00000434760 C1orf167Q5SNV9 1468 aa23.43■■□□□ 1.34
NUP50-210ENST00000434760 RGL3Q3MIN7 710 aa23.4■■□□□ 1.34
NUP50-210ENST00000434760 FMN2Q9NZ56 1722 aa23.39■■□□□ 1.33
NUP50-210ENST00000434760 LRPPRCP42704 1394 aaKnown RBP23.39■■□□□ 1.33
NUP50-210ENST00000434760 SPATA31A6Q5VVP1 1343 aa23.35■■□□□ 1.33
NUP50-210ENST00000434760 YTHDC2Q9H6S0 1430 aaKnown RBP23.35■■□□□ 1.33
NUP50-210ENST00000434760 ABCC11Q96J66 1382 aa23.34■■□□□ 1.33
NUP50-210ENST00000434760 ADGRB1O14514 1584 aa23.34■■□□□ 1.33
NUP50-210ENST00000434760 PLEKHH1Q9ULM0 1364 aa23.32■■□□□ 1.32
NUP50-210ENST00000434760 COL22A1Q8NFW1 1626 aaPredicted RBP23.3■■□□□ 1.32
NUP50-210ENST00000434760 HRCP23327 699 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms