RNA–Protein interactions for RNA: ENST00000433619.2

FAM3A-211, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-211ENST00000433619 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.63■■■□□ 2.17
FAM3A-211ENST00000433619 RAB3GAP2Q9H2M9 1393 aa28.62■■■□□ 2.17
FAM3A-211ENST00000433619 IQSEC2Q5JU85 1478 aa28.62■■■□□ 2.17
FAM3A-211ENST00000433619 HRCP23327 699 aa28.61■■■□□ 2.17
FAM3A-211ENST00000433619 CPS1P31327 1500 aa28.59■■■□□ 2.17
FAM3A-211ENST00000433619 FOXD1Q16676 465 aa28.58■■■□□ 2.17
FAM3A-211ENST00000433619 CLTCL1P53675 1640 aa28.58■■■□□ 2.17
FAM3A-211ENST00000433619 PPP1R15AO75807 674 aaPredicted RBP28.57■■■□□ 2.16
FAM3A-211ENST00000433619 PLEKHG1Q9ULL1 1385 aa28.57■■■□□ 2.16
FAM3A-211ENST00000433619 SLC26A8Q96RN1 970 aa28.55■■■□□ 2.16
FAM3A-211ENST00000433619 BCANQ96GW7 911 aa28.53■■■□□ 2.16
FAM3A-211ENST00000433619 ZNF326Q5BKZ1 582 aaKnown RBP28.52■■■□□ 2.16
FAM3A-211ENST00000433619 NUTM2DQ5VT03 806 aaPredicted RBP28.52■■■□□ 2.16
FAM3A-211ENST00000433619 TBX22Q9Y458 520 aa28.5■■■□□ 2.15
FAM3A-211ENST00000433619 STRCP1A6NGW2 1772 aa28.5■■■□□ 2.15
FAM3A-211ENST00000433619 KIF1BO60333 1816 aa28.49■■■□□ 2.15
FAM3A-211ENST00000433619 KCNA6P17658 529 aa28.49■■■□□ 2.15
FAM3A-211ENST00000433619 SENP3Q9H4L4 574 aaPredicted RBP28.46■■■□□ 2.15
FAM3A-211ENST00000433619 LRRC7Q96NW7 1537 aa28.44■■■□□ 2.14
FAM3A-211ENST00000433619 RPGRIP1LQ68CZ1 1315 aa28.43■■■□□ 2.14
FAM3A-211ENST00000433619 CCDC144AA2RUR9 1427 aa28.43■■■□□ 2.14
FAM3A-211ENST00000433619 ADAMTS13Q76LX8 1427 aa28.43■■■□□ 2.14
FAM3A-211ENST00000433619 UBAP1LF5GYI3 381 aa28.41■■■□□ 2.14
FAM3A-211ENST00000433619 NEXMIFQ5QGS0 1516 aa28.41■■■□□ 2.14
FAM3A-211ENST00000433619 VGFO15240 615 aaPredicted RBP28.4■■■□□ 2.14
FAM3A-211ENST00000433619 PIK3R4Q99570 1358 aa28.37■■■□□ 2.13
FAM3A-211ENST00000433619 DIP2AQ14689 1571 aa28.37■■■□□ 2.13
FAM3A-211ENST00000433619 SPATA31E1Q6ZUB1 1445 aa28.35■■■□□ 2.13
FAM3A-211ENST00000433619 TOM1O60784 492 aa28.35■■■□□ 2.13
FAM3A-211ENST00000433619 SETBP1Q9Y6X0 1596 aa28.35■■■□□ 2.13
FAM3A-211ENST00000433619 CHD2O14647 1828 aaKnown RBP28.34■■■□□ 2.13
FAM3A-211ENST00000433619 NWD1Q149M9 1564 aa28.34■■■□□ 2.13
FAM3A-211ENST00000433619 PROSER2Q86WR7 435 aaPredicted RBP28.34■■■□□ 2.13
FAM3A-211ENST00000433619 ANKRD30BQ9BXX2 1392 aa28.33■■■□□ 2.13
FAM3A-211ENST00000433619 RGL3Q3MIN7 710 aa28.32■■■□□ 2.12
FAM3A-211ENST00000433619 NKTRP30414 1462 aaKnown RBP28.32■■■□□ 2.12
FAM3A-211ENST00000433619 NRXN3Q9Y4C0 1643 aa28.31■■■□□ 2.12
FAM3A-211ENST00000433619 TMEM94Q12767 1356 aa28.3■■■□□ 2.12
FAM3A-211ENST00000433619 XIRP1Q702N8 1843 aaKnown RBP28.27■■■□□ 2.12
FAM3A-211ENST00000433619 PPLO60437 1756 aa28.27■■■□□ 2.12
FAM3A-211ENST00000433619 AMOTL2Q9Y2J4 779 aa28.27■■■□□ 2.12
FAM3A-211ENST00000433619 METP08581 1390 aa28.25■■■□□ 2.11
FAM3A-211ENST00000433619 RBM33Q96EV2 1170 aaKnown RBP28.25■■■□□ 2.11
FAM3A-211ENST00000433619 PTPRUQ92729 1446 aa28.25■■■□□ 2.11
FAM3A-211ENST00000433619 ALKQ9UM73 1620 aa28.23■■■□□ 2.11
FAM3A-211ENST00000433619 TRIM26Q12899 539 aaPredicted RBP28.23■■■□□ 2.11
FAM3A-211ENST00000433619 ADGRF5Q8IZF2 1346 aa28.22■■■□□ 2.11
FAM3A-211ENST00000433619 NCOA3Q9Y6Q9 1424 aa28.22■■■□□ 2.11
FAM3A-211ENST00000433619 PIP4K2BP78356 416 aa28.21■■■□□ 2.11
FAM3A-211ENST00000433619 IFT172Q9UG01 1749 aa28.18■■■□□ 2.1
FAM3A-211ENST00000433619 SCAF1Q9H7N4 1312 aaKnown RBP28.16■■■□□ 2.1
FAM3A-211ENST00000433619 MSH6P52701 1360 aa28.14■■■□□ 2.1
FAM3A-211ENST00000433619 XRN1Q8IZH2 1706 aaKnown RBP28.14■■■□□ 2.1
FAM3A-211ENST00000433619 SETD1AO15047 1707 aaKnown RBP28.13■■■□□ 2.09
FAM3A-211ENST00000433619 C19orf44Q9H6X5 657 aa28.12■■■□□ 2.09
FAM3A-211ENST00000433619 PIK3C2GO75747 1445 aa28.09■■■□□ 2.09
FAM3A-211ENST00000433619 C14orf37Q86TY3 774 aa28.09■■■□□ 2.09
FAM3A-211ENST00000433619 STAC3Q96MF2 364 aa28.09■■■□□ 2.09
FAM3A-211ENST00000433619 MYOM2P54296 1465 aa28.08■■■□□ 2.09
FAM3A-211ENST00000433619 NRXN1Q9ULB1 1477 aa28.08■■■□□ 2.09
FAM3A-211ENST00000433619 HSPA1LP34931 641 aa28.07■■■□□ 2.08
FAM3A-211ENST00000433619 C14orf93Q9H972 538 aaKnown RBP28.07■■■□□ 2.08
FAM3A-211ENST00000433619 SLAIN2Q9P270 581 aa28.06■■■□□ 2.08
FAM3A-211ENST00000433619 FAM135BQ49AJ0 1406 aa28.06■■■□□ 2.08
FAM3A-211ENST00000433619 PRAG1Q86YV5 1406 aa28.05■■■□□ 2.08
FAM3A-211ENST00000433619 CADPS2Q86UW7 1296 aa28.04■■■□□ 2.08
FAM3A-211ENST00000433619 DCAF11Q8TEB1 546 aa28.04■■■□□ 2.08
FAM3A-211ENST00000433619 PTCH1Q13635 1447 aa28.02■■■□□ 2.08
FAM3A-211ENST00000433619 ATF3P18847 181 aa28.02■■■□□ 2.08
FAM3A-211ENST00000433619 DHX57Q6P158 1386 aaKnown RBP28.01■■■□□ 2.07
FAM3A-211ENST00000433619 ROBO2Q9HCK4 1378 aa28.01■■■□□ 2.07
FAM3A-211ENST00000433619 CFAP70Q5T0N1 1121 aa28.01■■■□□ 2.07
FAM3A-211ENST00000433619 TMEM132EQ6IEE7 984 aa28.01■■■□□ 2.07
FAM3A-211ENST00000433619 KDM2AQ9Y2K7 1162 aa28.01■■■□□ 2.07
FAM3A-211ENST00000433619 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.01■■■□□ 2.07
FAM3A-211ENST00000433619 LRPPRCP42704 1394 aaKnown RBP27.99■■■□□ 2.07
FAM3A-211ENST00000433619 DCCP43146 1447 aa27.98■■■□□ 2.07
FAM3A-211ENST00000433619 ABCC11Q96J66 1382 aa27.98■■■□□ 2.07
FAM3A-211ENST00000433619 STK26Q9P289 416 aa27.96■■■□□ 2.07
FAM3A-211ENST00000433619 ADGRL3Q9HAR2 1447 aa27.95■■■□□ 2.07
FAM3A-211ENST00000433619 ASXL1Q8IXJ9 1541 aa27.95■■■□□ 2.06
FAM3A-211ENST00000433619 TECPR2O15040 1411 aa27.94■■■□□ 2.06
FAM3A-211ENST00000433619 SIRT1Q96EB6 747 aa27.94■■■□□ 2.06
FAM3A-211ENST00000433619 YTHDC2Q9H6S0 1430 aaKnown RBP27.93■■■□□ 2.06
FAM3A-211ENST00000433619 LAMC1P11047 1609 aa27.92■■■□□ 2.06
FAM3A-211ENST00000433619 ROBO1Q9Y6N7 1651 aa27.91■■■□□ 2.06
FAM3A-211ENST00000433619 SIN3AQ96ST3 1273 aa27.91■■■□□ 2.06
FAM3A-211ENST00000433619 WAPLQ7Z5K2 1190 aa27.89■■■□□ 2.06
FAM3A-211ENST00000433619 NALCNQ8IZF0 1738 aa27.87■■■□□ 2.05
FAM3A-211ENST00000433619 MST1RQ04912 1400 aa27.86■■■□□ 2.05
FAM3A-211ENST00000433619 KNDC1Q76NI1 1749 aa27.86■■■□□ 2.05
FAM3A-211ENST00000433619 ADGRB1O14514 1584 aa27.83■■■□□ 2.05
FAM3A-211ENST00000433619 NEUROD1Q13562 356 aa27.83■■■□□ 2.05
FAM3A-211ENST00000433619 BRINP3Q76B58 766 aa27.83■■■□□ 2.05
FAM3A-211ENST00000433619 L3MBTL2Q969R5 705 aa27.83■■■□□ 2.05
FAM3A-211ENST00000433619 PLEKHH1Q9ULM0 1364 aa27.82■■■□□ 2.04
FAM3A-211ENST00000433619 DLC1Q96QB1 1528 aa27.77■■■□□ 2.04
FAM3A-211ENST00000433619 C1orf167Q5SNV9 1468 aa27.77■■■□□ 2.04
FAM3A-211ENST00000433619 PRAM1Q96QH2 718 aa27.77■■■□□ 2.04
FAM3A-211ENST00000433619 TRAK1Q9UPV9 953 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms