RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 CHGAP10645 457 aaKnown RBP24.57■■□□□ 1.52
LINC00887-203ENST00000429578 NCKAP5LQ9HCH0 1330 aa24.54■■□□□ 1.52
LINC00887-203ENST00000429578 A2ML1A8K2U0 1454 aa24.53■■□□□ 1.52
LINC00887-203ENST00000429578 STAG3Q9UJ98 1225 aa24.53■■□□□ 1.52
LINC00887-203ENST00000429578 PPP1R15AO75807 674 aaPredicted RBP24.52■■□□□ 1.52
LINC00887-203ENST00000429578 DCAF11Q8TEB1 546 aa24.52■■□□□ 1.52
LINC00887-203ENST00000429578 ZNF326Q5BKZ1 582 aaKnown RBP24.51■■□□□ 1.51
LINC00887-203ENST00000429578 NEXMIFQ5QGS0 1516 aa24.51■■□□□ 1.51
LINC00887-203ENST00000429578 RPGRIP1LQ68CZ1 1315 aa24.5■■□□□ 1.51
LINC00887-203ENST00000429578 STAC3Q96MF2 364 aa24.48■■□□□ 1.51
LINC00887-203ENST00000429578 KDM2AQ9Y2K7 1162 aa24.47■■□□□ 1.51
LINC00887-203ENST00000429578 MYOM2P54296 1465 aa24.46■■□□□ 1.51
LINC00887-203ENST00000429578 PRAG1Q86YV5 1406 aa24.42■■□□□ 1.5
LINC00887-203ENST00000429578 LTBP4Q8N2S1 1624 aa24.42■■□□□ 1.5
LINC00887-203ENST00000429578 ZFYVE9O95405 1425 aa24.41■■□□□ 1.5
LINC00887-203ENST00000429578 SLIT1O75093 1534 aa24.41■■□□□ 1.5
LINC00887-203ENST00000429578 NRXN1Q9ULB1 1477 aa24.41■■□□□ 1.5
LINC00887-203ENST00000429578 TMEM2Q9UHN6 1383 aa24.41■■□□□ 1.5
LINC00887-203ENST00000429578 THEMISQ8N1K5 641 aaPredicted RBP24.41■■□□□ 1.5
LINC00887-203ENST00000429578 RIMS2Q9UQ26 1411 aa24.4■■□□□ 1.5
LINC00887-203ENST00000429578 TRPM1Q7Z4N2 1603 aa24.4■■□□□ 1.5
LINC00887-203ENST00000429578 NBPF8Q3BBV2 869 aa24.39■■□□□ 1.5
LINC00887-203ENST00000429578 ARHGAP23Q9P227 1491 aa24.39■■□□□ 1.49
LINC00887-203ENST00000429578 VGFO15240 615 aaPredicted RBP24.38■■□□□ 1.49
LINC00887-203ENST00000429578 KIAA1210Q9ULL0 1709 aa24.38■■□□□ 1.49
LINC00887-203ENST00000429578 ZNF335Q9H4Z2 1342 aaPredicted RBP24.37■■□□□ 1.49
LINC00887-203ENST00000429578 ADGRF5Q8IZF2 1346 aa24.37■■□□□ 1.49
LINC00887-203ENST00000429578 HDGFP51858 240 aaKnown RBP24.36■■□□□ 1.49
LINC00887-203ENST00000429578 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.35■■□□□ 1.49
LINC00887-203ENST00000429578 NUTM2DQ5VT03 806 aaPredicted RBP24.35■■□□□ 1.49
LINC00887-203ENST00000429578 ANKLE2Q86XL3 938 aa24.35■■□□□ 1.49
LINC00887-203ENST00000429578 PIK3C2GO75747 1445 aa24.34■■□□□ 1.49
LINC00887-203ENST00000429578 POLR1AO95602 1720 aaPredicted RBP24.34■■□□□ 1.49
LINC00887-203ENST00000429578 RALGAPBQ86X10 1494 aa24.33■■□□□ 1.49
LINC00887-203ENST00000429578 LAMC1P11047 1609 aa24.33■■□□□ 1.49
LINC00887-203ENST00000429578 IQSEC2Q5JU85 1478 aa24.32■■□□□ 1.48
LINC00887-203ENST00000429578 EID1Q9Y6B2 187 aa24.3■■□□□ 1.48
LINC00887-203ENST00000429578 IQGAP1P46940 1657 aa24.29■■□□□ 1.48
LINC00887-203ENST00000429578 NRXN3Q9Y4C0 1643 aa24.29■■□□□ 1.48
LINC00887-203ENST00000429578 LTKP29376 864 aa24.28■■□□□ 1.48
LINC00887-203ENST00000429578 TXNDC2Q86VQ3 553 aa24.28■■□□□ 1.48
LINC00887-203ENST00000429578 SCAF11Q99590 1463 aaKnown RBP24.28■■□□□ 1.48
LINC00887-203ENST00000429578 SETBP1Q9Y6X0 1596 aa24.27■■□□□ 1.48
LINC00887-203ENST00000429578 SETD1AO15047 1707 aaKnown RBP24.26■■□□□ 1.47
LINC00887-203ENST00000429578 NPHP4O75161 1426 aaPredicted RBP24.25■■□□□ 1.47
LINC00887-203ENST00000429578 C14orf93Q9H972 538 aaKnown RBP24.24■■□□□ 1.47
LINC00887-203ENST00000429578 PLEKHG1Q9ULL1 1385 aa24.24■■□□□ 1.47
LINC00887-203ENST00000429578 ALKQ9UM73 1620 aa24.24■■□□□ 1.47
LINC00887-203ENST00000429578 CFAP70Q5T0N1 1121 aa24.24■■□□□ 1.47
LINC00887-203ENST00000429578 ROCK2O75116 1388 aaKnown RBP24.23■■□□□ 1.47
LINC00887-203ENST00000429578 MED14O60244 1454 aa24.23■■□□□ 1.47
LINC00887-203ENST00000429578 GPRASP1Q5JY77 1395 aa24.22■■□□□ 1.47
LINC00887-203ENST00000429578 NBPF1Q3BBV0 1214 aa24.21■■□□□ 1.47
LINC00887-203ENST00000429578 ADGRB1O14514 1584 aa24.19■■□□□ 1.46
LINC00887-203ENST00000429578 CARD11Q9BXL7 1154 aa24.18■■□□□ 1.46
LINC00887-203ENST00000429578 SENP3Q9H4L4 574 aaPredicted RBP24.18■■□□□ 1.46
LINC00887-203ENST00000429578 UBAP1LF5GYI3 381 aa24.17■■□□□ 1.46
LINC00887-203ENST00000429578 CPS1P31327 1500 aa24.17■■□□□ 1.46
LINC00887-203ENST00000429578 DIP2AQ14689 1571 aa24.17■■□□□ 1.46
LINC00887-203ENST00000429578 ADAMTS13Q76LX8 1427 aa24.16■■□□□ 1.46
LINC00887-203ENST00000429578 ASXL1Q8IXJ9 1541 aa24.16■■□□□ 1.46
LINC00887-203ENST00000429578 BCANQ96GW7 911 aa24.16■■□□□ 1.46
LINC00887-203ENST00000429578 TMEM132EQ6IEE7 984 aa24.11■■□□□ 1.45
LINC00887-203ENST00000429578 USP47Q96K76 1375 aa24.1■■□□□ 1.45
LINC00887-203ENST00000429578 EIF4G2P78344 907 aaKnown RBP eCLIP24.1■■□□□ 1.45
LINC00887-203ENST00000429578 TBX22Q9Y458 520 aa24.1■■□□□ 1.45
LINC00887-203ENST00000429578 ARHGEF28Q8N1W1 1705 aaKnown RBP24.09■■□□□ 1.45
LINC00887-203ENST00000429578 KNDC1Q76NI1 1749 aa24.08■■□□□ 1.45
LINC00887-203ENST00000429578 SLC26A8Q96RN1 970 aa24.08■■□□□ 1.45
LINC00887-203ENST00000429578 METP08581 1390 aa24.08■■□□□ 1.44
LINC00887-203ENST00000429578 YTHDC2Q9H6S0 1430 aaKnown RBP24.07■■□□□ 1.44
LINC00887-203ENST00000429578 CHD2O14647 1828 aaKnown RBP24.07■■□□□ 1.44
LINC00887-203ENST00000429578 HSPA5P11021 654 aaKnown RBP24.05■■□□□ 1.44
LINC00887-203ENST00000429578 TOM1O60784 492 aa24.04■■□□□ 1.44
LINC00887-203ENST00000429578 EIF3AQ14152 1382 aaKnown RBP24.04■■□□□ 1.44
LINC00887-203ENST00000429578 LRPPRCP42704 1394 aaKnown RBP24.03■■□□□ 1.44
LINC00887-203ENST00000429578 PIK3R4Q99570 1358 aa24.03■■□□□ 1.44
LINC00887-203ENST00000429578 SCAF1Q9H7N4 1312 aaKnown RBP24.02■■□□□ 1.44
LINC00887-203ENST00000429578 TRAK1Q9UPV9 953 aa24.01■■□□□ 1.43
LINC00887-203ENST00000429578 STRCP1A6NGW2 1772 aa24.01■■□□□ 1.43
LINC00887-203ENST00000429578 DLC1Q96QB1 1528 aa24.01■■□□□ 1.43
LINC00887-203ENST00000429578 XRN1Q8IZH2 1706 aaKnown RBP24.01■■□□□ 1.43
LINC00887-203ENST00000429578 ABCC11Q96J66 1382 aa24■■□□□ 1.43
LINC00887-203ENST00000429578 QRICH2Q9H0J4 1663 aa24■■□□□ 1.43
LINC00887-203ENST00000429578 PIP4K2BP78356 416 aa24■■□□□ 1.43
LINC00887-203ENST00000429578 STK26Q9P289 416 aa24■■□□□ 1.43
LINC00887-203ENST00000429578 TECPR2O15040 1411 aa23.99■■□□□ 1.43
LINC00887-203ENST00000429578 ST20-MTHFSA0A0A6YYL1 179 aa23.99■■□□□ 1.43
LINC00887-203ENST00000429578 HIRIP3Q9BW71 556 aaPredicted RBP23.99■■□□□ 1.43
LINC00887-203ENST00000429578 LRRC7Q96NW7 1537 aa23.99■■□□□ 1.43
LINC00887-203ENST00000429578 PTPRUQ92729 1446 aa23.98■■□□□ 1.43
LINC00887-203ENST00000429578 ZNF316A6NFI3 1004 aaPredicted RBP23.96■■□□□ 1.43
LINC00887-203ENST00000429578 DISP3Q9P2K9 1392 aa23.95■■□□□ 1.42
LINC00887-203ENST00000429578 NWD1Q149M9 1564 aa23.94■■□□□ 1.42
LINC00887-203ENST00000429578 CENPJQ9HC77 1338 aaPredicted RBP23.93■■□□□ 1.42
LINC00887-203ENST00000429578 AMOTL2Q9Y2J4 779 aa23.93■■□□□ 1.42
LINC00887-203ENST00000429578 FAM135BQ49AJ0 1406 aa23.93■■□□□ 1.42
LINC00887-203ENST00000429578 SIRT1Q96EB6 747 aa23.93■■□□□ 1.42
LINC00887-203ENST00000429578 PTCH1Q13635 1447 aa23.91■■□□□ 1.42
LINC00887-203ENST00000429578 TESK2Q96S53 571 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms