RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 SLC26A8Q96RN1 970 aa27.21■■□□□ 1.95
SSR4P1-202ENST00000429427 PLEKHG1Q9ULL1 1385 aa27.2■■□□□ 1.94
SSR4P1-202ENST00000429427 SENP3Q9H4L4 574 aaPredicted RBP27.19■■□□□ 1.94
SSR4P1-202ENST00000429427 ALKQ9UM73 1620 aa27.19■■□□□ 1.94
SSR4P1-202ENST00000429427 NUTM2DQ5VT03 806 aaPredicted RBP27.17■■□□□ 1.94
SSR4P1-202ENST00000429427 SLC4A1APQ9BWU0 796 aaKnown RBP27.17■■□□□ 1.94
SSR4P1-202ENST00000429427 UBAP1LF5GYI3 381 aa27.16■■□□□ 1.94
SSR4P1-202ENST00000429427 FOXD1Q16676 465 aa27.13■■□□□ 1.93
SSR4P1-202ENST00000429427 ADAMTS13Q76LX8 1427 aa27.13■■□□□ 1.93
SSR4P1-202ENST00000429427 SETD5Q9C0A6 1442 aa27.13■■□□□ 1.93
SSR4P1-202ENST00000429427 NWD1Q149M9 1564 aa27.13■■□□□ 1.93
SSR4P1-202ENST00000429427 PPP1R15AO75807 674 aaPredicted RBP27.12■■□□□ 1.93
SSR4P1-202ENST00000429427 XIRP1Q702N8 1843 aaKnown RBP27.11■■□□□ 1.93
SSR4P1-202ENST00000429427 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.1■■□□□ 1.93
SSR4P1-202ENST00000429427 KCNA6P17658 529 aa27.09■■□□□ 1.93
SSR4P1-202ENST00000429427 NEXMIFQ5QGS0 1516 aa27.08■■□□□ 1.93
SSR4P1-202ENST00000429427 HDGFP51858 240 aaKnown RBP27.08■■□□□ 1.93
SSR4P1-202ENST00000429427 NRXN3Q9Y4C0 1643 aa27.08■■□□□ 1.93
SSR4P1-202ENST00000429427 BCANQ96GW7 911 aa27.07■■□□□ 1.92
SSR4P1-202ENST00000429427 MPHOSPH9Q99550 1183 aa27.07■■□□□ 1.92
SSR4P1-202ENST00000429427 RAB3GAP2Q9H2M9 1393 aa27.07■■□□□ 1.92
SSR4P1-202ENST00000429427 TBX22Q9Y458 520 aa27.05■■□□□ 1.92
SSR4P1-202ENST00000429427 NKTRP30414 1462 aaKnown RBP27.04■■□□□ 1.92
SSR4P1-202ENST00000429427 KIF1BO60333 1816 aa27.04■■□□□ 1.92
SSR4P1-202ENST00000429427 CHD2O14647 1828 aaKnown RBP27.03■■□□□ 1.92
SSR4P1-202ENST00000429427 TMEM94Q12767 1356 aa27.03■■□□□ 1.92
SSR4P1-202ENST00000429427 DIP2AQ14689 1571 aa27.03■■□□□ 1.92
SSR4P1-202ENST00000429427 SETBP1Q9Y6X0 1596 aa27.03■■□□□ 1.92
SSR4P1-202ENST00000429427 ZNF326Q5BKZ1 582 aaKnown RBP27.02■■□□□ 1.92
SSR4P1-202ENST00000429427 RBM33Q96EV2 1170 aaKnown RBP27.01■■□□□ 1.91
SSR4P1-202ENST00000429427 TOM1O60784 492 aa27■■□□□ 1.91
SSR4P1-202ENST00000429427 PIP4K2BP78356 416 aa26.99■■□□□ 1.91
SSR4P1-202ENST00000429427 PTPRUQ92729 1446 aa26.98■■□□□ 1.91
SSR4P1-202ENST00000429427 PROSER2Q86WR7 435 aaPredicted RBP26.96■■□□□ 1.91
SSR4P1-202ENST00000429427 PIK3R4Q99570 1358 aa26.95■■□□□ 1.9
SSR4P1-202ENST00000429427 CCDC144AA2RUR9 1427 aa26.94■■□□□ 1.9
SSR4P1-202ENST00000429427 SPATA31E1Q6ZUB1 1445 aa26.94■■□□□ 1.9
SSR4P1-202ENST00000429427 SCAF1Q9H7N4 1312 aaKnown RBP26.93■■□□□ 1.9
SSR4P1-202ENST00000429427 METP08581 1390 aa26.93■■□□□ 1.9
SSR4P1-202ENST00000429427 HSPA1LP34931 641 aa26.91■■□□□ 1.9
SSR4P1-202ENST00000429427 PPLO60437 1756 aa26.91■■□□□ 1.9
SSR4P1-202ENST00000429427 XRN1Q8IZH2 1706 aaKnown RBP26.9■■□□□ 1.9
SSR4P1-202ENST00000429427 ACIN1Q9UKV3 1341 aaKnown RBP26.9■■□□□ 1.9
SSR4P1-202ENST00000429427 SETD1AO15047 1707 aaKnown RBP26.88■■□□□ 1.89
SSR4P1-202ENST00000429427 RPGRIP1LQ68CZ1 1315 aa26.88■■□□□ 1.89
SSR4P1-202ENST00000429427 AMOTL2Q9Y2J4 779 aa26.87■■□□□ 1.89
SSR4P1-202ENST00000429427 IFT172Q9UG01 1749 aa26.83■■□□□ 1.89
SSR4P1-202ENST00000429427 VGFO15240 615 aaPredicted RBP26.83■■□□□ 1.89
SSR4P1-202ENST00000429427 HRCP23327 699 aa26.83■■□□□ 1.89
SSR4P1-202ENST00000429427 NCOA3Q9Y6Q9 1424 aa26.82■■□□□ 1.88
SSR4P1-202ENST00000429427 RGL3Q3MIN7 710 aa26.81■■□□□ 1.88
SSR4P1-202ENST00000429427 ADGRF5Q8IZF2 1346 aa26.81■■□□□ 1.88
SSR4P1-202ENST00000429427 MSH6P52701 1360 aa26.81■■□□□ 1.88
SSR4P1-202ENST00000429427 ANKRD30BQ9BXX2 1392 aa26.8■■□□□ 1.88
SSR4P1-202ENST00000429427 FAM135BQ49AJ0 1406 aa26.79■■□□□ 1.88
SSR4P1-202ENST00000429427 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.76■■□□□ 1.87
SSR4P1-202ENST00000429427 ROBO1Q9Y6N7 1651 aa26.76■■□□□ 1.87
SSR4P1-202ENST00000429427 PIK3C2GO75747 1445 aa26.73■■□□□ 1.87
SSR4P1-202ENST00000429427 PRAG1Q86YV5 1406 aa26.73■■□□□ 1.87
SSR4P1-202ENST00000429427 ASXL1Q8IXJ9 1541 aa26.71■■□□□ 1.87
SSR4P1-202ENST00000429427 C19orf44Q9H6X5 657 aa26.71■■□□□ 1.87
SSR4P1-202ENST00000429427 SLAIN2Q9P270 581 aa26.71■■□□□ 1.87
SSR4P1-202ENST00000429427 ROBO2Q9HCK4 1378 aa26.71■■□□□ 1.87
SSR4P1-202ENST00000429427 C14orf37Q86TY3 774 aa26.7■■□□□ 1.86
SSR4P1-202ENST00000429427 PTCH1Q13635 1447 aa26.7■■□□□ 1.86
SSR4P1-202ENST00000429427 NRXN1Q9ULB1 1477 aa26.69■■□□□ 1.86
SSR4P1-202ENST00000429427 DISP3Q9P2K9 1392 aa26.68■■□□□ 1.86
SSR4P1-202ENST00000429427 NALCNQ8IZF0 1738 aa26.68■■□□□ 1.86
SSR4P1-202ENST00000429427 MYOM2P54296 1465 aa26.67■■□□□ 1.86
SSR4P1-202ENST00000429427 DCCP43146 1447 aa26.66■■□□□ 1.86
SSR4P1-202ENST00000429427 ADGRL3Q9HAR2 1447 aa26.66■■□□□ 1.86
SSR4P1-202ENST00000429427 MED1Q15648 1581 aaPredicted RBP26.64■■□□□ 1.86
SSR4P1-202ENST00000429427 CADPS2Q86UW7 1296 aa26.64■■□□□ 1.86
SSR4P1-202ENST00000429427 ATF3P18847 181 aa26.62■■□□□ 1.85
SSR4P1-202ENST00000429427 MST1RQ04912 1400 aa26.61■■□□□ 1.85
SSR4P1-202ENST00000429427 TECPR2O15040 1411 aa26.6■■□□□ 1.85
SSR4P1-202ENST00000429427 TMEM132EQ6IEE7 984 aa26.6■■□□□ 1.85
SSR4P1-202ENST00000429427 LRPPRCP42704 1394 aaKnown RBP26.58■■□□□ 1.84
SSR4P1-202ENST00000429427 DHX57Q6P158 1386 aaKnown RBP26.58■■□□□ 1.84
SSR4P1-202ENST00000429427 C14orf93Q9H972 538 aaKnown RBP26.57■■□□□ 1.84
SSR4P1-202ENST00000429427 COL16A1Q07092 1604 aaPredicted RBP26.56■■□□□ 1.84
SSR4P1-202ENST00000429427 CFAP70Q5T0N1 1121 aa26.55■■□□□ 1.84
SSR4P1-202ENST00000429427 BRINP3Q76B58 766 aa26.55■■□□□ 1.84
SSR4P1-202ENST00000429427 PHLPP1O60346 1717 aa26.55■■□□□ 1.84
SSR4P1-202ENST00000429427 ABCC11Q96J66 1382 aa26.55■■□□□ 1.84
SSR4P1-202ENST00000429427 KNDC1Q76NI1 1749 aa26.54■■□□□ 1.84
SSR4P1-202ENST00000429427 ILDR2Q71H61 639 aa26.54■■□□□ 1.84
SSR4P1-202ENST00000429427 STK26Q9P289 416 aa26.54■■□□□ 1.84
SSR4P1-202ENST00000429427 YTHDC2Q9H6S0 1430 aaKnown RBP26.54■■□□□ 1.84
SSR4P1-202ENST00000429427 AHDC1Q5TGY3 1603 aaPredicted RBP26.54■■□□□ 1.84
SSR4P1-202ENST00000429427 PLEKHH1Q9ULM0 1364 aa26.53■■□□□ 1.84
SSR4P1-202ENST00000429427 LAMC1P11047 1609 aa26.53■■□□□ 1.84
SSR4P1-202ENST00000429427 WAPLQ7Z5K2 1190 aa26.51■■□□□ 1.83
SSR4P1-202ENST00000429427 ADGRB1O14514 1584 aa26.5■■□□□ 1.83
SSR4P1-202ENST00000429427 C1orf167Q5SNV9 1468 aa26.49■■□□□ 1.83
SSR4P1-202ENST00000429427 DCAF11Q8TEB1 546 aa26.49■■□□□ 1.83
SSR4P1-202ENST00000429427 KDM2AQ9Y2K7 1162 aa26.48■■□□□ 1.83
SSR4P1-202ENST00000429427 CDC42BPGQ6DT37 1551 aa26.47■■□□□ 1.83
SSR4P1-202ENST00000429427 NHSL1Q5SYE7 1610 aa26.46■■□□□ 1.83
SSR4P1-202ENST00000429427 DDX17Q92841 729 aaKnown RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms