RNA–Protein interactions for RNA: ENST00000428546.2

KCNMA1-213, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-213ENST00000428546 UBAP1LF5GYI3 381 aa17.21■□□□□ 0.35
KCNMA1-213ENST00000428546 NUTM2DQ5VT03 806 aaPredicted RBP17.21■□□□□ 0.35
KCNMA1-213ENST00000428546 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.35
KCNMA1-213ENST00000428546 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.34
KCNMA1-213ENST00000428546 HDGFP51858 240 aaKnown RBP17.2■□□□□ 0.34
KCNMA1-213ENST00000428546 CLTCL1P53675 1640 aa17.2■□□□□ 0.34
KCNMA1-213ENST00000428546 ZNF326Q5BKZ1 582 aaKnown RBP17.19■□□□□ 0.34
KCNMA1-213ENST00000428546 SLC26A8Q96RN1 970 aa17.19■□□□□ 0.34
KCNMA1-213ENST00000428546 TRPM2O94759 1503 aa17.17■□□□□ 0.34
KCNMA1-213ENST00000428546 ZFYVE9O95405 1425 aa17.16■□□□□ 0.34
KCNMA1-213ENST00000428546 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.15■□□□□ 0.34
KCNMA1-213ENST00000428546 PIP4K2BP78356 416 aa17.14■□□□□ 0.33
KCNMA1-213ENST00000428546 SETD5Q9C0A6 1442 aa17.13■□□□□ 0.33
KCNMA1-213ENST00000428546 FOXD1Q16676 465 aa17.13■□□□□ 0.33
KCNMA1-213ENST00000428546 PLEKHG1Q9ULL1 1385 aa17.13■□□□□ 0.33
KCNMA1-213ENST00000428546 LRRC7Q96NW7 1537 aa17.12■□□□□ 0.33
KCNMA1-213ENST00000428546 TOM1O60784 492 aa17.11■□□□□ 0.33
KCNMA1-213ENST00000428546 XIRP1Q702N8 1843 aaKnown RBP17.11■□□□□ 0.33
KCNMA1-213ENST00000428546 CHD2O14647 1828 aaKnown RBP17.1■□□□□ 0.33
KCNMA1-213ENST00000428546 RAB3GAP2Q9H2M9 1393 aa17.08■□□□□ 0.32
KCNMA1-213ENST00000428546 PROSER2Q86WR7 435 aaPredicted RBP17.08■□□□□ 0.32
KCNMA1-213ENST00000428546 MPHOSPH9Q99550 1183 aa17.08■□□□□ 0.32
KCNMA1-213ENST00000428546 DIP2AQ14689 1571 aa17.07■□□□□ 0.32
KCNMA1-213ENST00000428546 KCNA6P17658 529 aa17.07■□□□□ 0.32
KCNMA1-213ENST00000428546 RBM33Q96EV2 1170 aaKnown RBP17.07■□□□□ 0.32
KCNMA1-213ENST00000428546 NWD1Q149M9 1564 aa17.06■□□□□ 0.32
KCNMA1-213ENST00000428546 NEXMIFQ5QGS0 1516 aa17.06■□□□□ 0.32
KCNMA1-213ENST00000428546 CCDC144AA2RUR9 1427 aa17.05■□□□□ 0.32
KCNMA1-213ENST00000428546 NKTRP30414 1462 aaKnown RBP17.05■□□□□ 0.32
KCNMA1-213ENST00000428546 TMEM94Q12767 1356 aa17.04■□□□□ 0.32
KCNMA1-213ENST00000428546 C14orf37Q86TY3 774 aa17.04■□□□□ 0.32
KCNMA1-213ENST00000428546 PPLO60437 1756 aa17.04■□□□□ 0.32
KCNMA1-213ENST00000428546 ACIN1Q9UKV3 1341 aaKnown RBP17.03■□□□□ 0.32
KCNMA1-213ENST00000428546 ADAMTS13Q76LX8 1427 aa17.03■□□□□ 0.32
KCNMA1-213ENST00000428546 NRXN3Q9Y4C0 1643 aa17.03■□□□□ 0.32
KCNMA1-213ENST00000428546 TBX22Q9Y458 520 aa17.02■□□□□ 0.32
KCNMA1-213ENST00000428546 SETBP1Q9Y6X0 1596 aa17.02■□□□□ 0.31
KCNMA1-213ENST00000428546 RGL3Q3MIN7 710 aa17.01■□□□□ 0.31
KCNMA1-213ENST00000428546 MSH6P52701 1360 aa16.99■□□□□ 0.31
KCNMA1-213ENST00000428546 ALKQ9UM73 1620 aa16.99■□□□□ 0.31
KCNMA1-213ENST00000428546 VGFO15240 615 aaPredicted RBP16.97■□□□□ 0.31
KCNMA1-213ENST00000428546 HSPA1LP34931 641 aa16.97■□□□□ 0.31
KCNMA1-213ENST00000428546 AMOTL2Q9Y2J4 779 aa16.96■□□□□ 0.31
KCNMA1-213ENST00000428546 PIK3R4Q99570 1358 aa16.96■□□□□ 0.31
KCNMA1-213ENST00000428546 IFT172Q9UG01 1749 aa16.96■□□□□ 0.3
KCNMA1-213ENST00000428546 RPGRIP1LQ68CZ1 1315 aa16.96■□□□□ 0.3
KCNMA1-213ENST00000428546 XRN1Q8IZH2 1706 aaKnown RBP16.95■□□□□ 0.3
KCNMA1-213ENST00000428546 PTPRUQ92729 1446 aa16.94■□□□□ 0.3
KCNMA1-213ENST00000428546 METP08581 1390 aa16.93■□□□□ 0.3
KCNMA1-213ENST00000428546 ROBO1Q9Y6N7 1651 aa16.93■□□□□ 0.3
KCNMA1-213ENST00000428546 SETD1AO15047 1707 aaKnown RBP16.93■□□□□ 0.3
KCNMA1-213ENST00000428546 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.93■□□□□ 0.3
KCNMA1-213ENST00000428546 DISP3Q9P2K9 1392 aa16.91■□□□□ 0.3
KCNMA1-213ENST00000428546 SPATA31E1Q6ZUB1 1445 aa16.9■□□□□ 0.3
KCNMA1-213ENST00000428546 ATF3P18847 181 aa16.89■□□□□ 0.29
KCNMA1-213ENST00000428546 ANKRD30BQ9BXX2 1392 aa16.89■□□□□ 0.29
KCNMA1-213ENST00000428546 ADGRF5Q8IZF2 1346 aa16.88■□□□□ 0.29
KCNMA1-213ENST00000428546 PHLPP1O60346 1717 aa16.87■□□□□ 0.29
KCNMA1-213ENST00000428546 NALCNQ8IZF0 1738 aa16.87■□□□□ 0.29
KCNMA1-213ENST00000428546 SLAIN2Q9P270 581 aa16.86■□□□□ 0.29
KCNMA1-213ENST00000428546 NCOA3Q9Y6Q9 1424 aa16.86■□□□□ 0.29
KCNMA1-213ENST00000428546 HRCP23327 699 aa16.85■□□□□ 0.29
KCNMA1-213ENST00000428546 CADPS2Q86UW7 1296 aa16.85■□□□□ 0.29
KCNMA1-213ENST00000428546 C19orf44Q9H6X5 657 aa16.85■□□□□ 0.29
KCNMA1-213ENST00000428546 STK26Q9P289 416 aa16.84■□□□□ 0.29
KCNMA1-213ENST00000428546 FAM135BQ49AJ0 1406 aa16.83■□□□□ 0.28
KCNMA1-213ENST00000428546 LAMC1P11047 1609 aa16.82■□□□□ 0.28
KCNMA1-213ENST00000428546 MED1Q15648 1581 aaPredicted RBP16.82■□□□□ 0.28
KCNMA1-213ENST00000428546 PIK3C2GO75747 1445 aa16.81■□□□□ 0.28
KCNMA1-213ENST00000428546 KDM2AQ9Y2K7 1162 aa16.81■□□□□ 0.28
KCNMA1-213ENST00000428546 PTCH1Q13635 1447 aa16.8■□□□□ 0.28
KCNMA1-213ENST00000428546 ADGRL3Q9HAR2 1447 aa16.8■□□□□ 0.28
KCNMA1-213ENST00000428546 ROBO2Q9HCK4 1378 aa16.8■□□□□ 0.28
KCNMA1-213ENST00000428546 TMEM132EQ6IEE7 984 aa16.8■□□□□ 0.28
KCNMA1-213ENST00000428546 MYOM2P54296 1465 aa16.8■□□□□ 0.28
KCNMA1-213ENST00000428546 KNDC1Q76NI1 1749 aa16.79■□□□□ 0.28
KCNMA1-213ENST00000428546 DCCP43146 1447 aa16.79■□□□□ 0.28
KCNMA1-213ENST00000428546 DCAF11Q8TEB1 546 aa16.78■□□□□ 0.28
KCNMA1-213ENST00000428546 PHF23Q9BUL5 403 aaPredicted RBP16.78■□□□□ 0.28
KCNMA1-213ENST00000428546 ASXL1Q8IXJ9 1541 aa16.77■□□□□ 0.28
KCNMA1-213ENST00000428546 CFAP70Q5T0N1 1121 aa16.75■□□□□ 0.27
KCNMA1-213ENST00000428546 LRPPRCP42704 1394 aaKnown RBP16.75■□□□□ 0.27
KCNMA1-213ENST00000428546 MST1RQ04912 1400 aa16.74■□□□□ 0.27
KCNMA1-213ENST00000428546 YTHDC2Q9H6S0 1430 aaKnown RBP16.74■□□□□ 0.27
KCNMA1-213ENST00000428546 COL16A1Q07092 1604 aaPredicted RBP16.74■□□□□ 0.27
KCNMA1-213ENST00000428546 NRXN1Q9ULB1 1477 aa16.73■□□□□ 0.27
KCNMA1-213ENST00000428546 DHX57Q6P158 1386 aaKnown RBP16.73■□□□□ 0.27
KCNMA1-213ENST00000428546 AHDC1Q5TGY3 1603 aaPredicted RBP16.72■□□□□ 0.27
KCNMA1-213ENST00000428546 BRINP3Q76B58 766 aa16.72■□□□□ 0.27
KCNMA1-213ENST00000428546 WAPLQ7Z5K2 1190 aa16.72■□□□□ 0.27
KCNMA1-213ENST00000428546 C14orf93Q9H972 538 aaKnown RBP16.72■□□□□ 0.27
KCNMA1-213ENST00000428546 TRIM26Q12899 539 aaPredicted RBP16.71■□□□□ 0.27
KCNMA1-213ENST00000428546 SAFB2Q14151 953 aaKnown RBP eCLIP16.71■□□□□ 0.27
KCNMA1-213ENST00000428546 PRAG1Q86YV5 1406 aa16.7■□□□□ 0.26
KCNMA1-213ENST00000428546 NHSL1Q5SYE7 1610 aa16.7■□□□□ 0.26
KCNMA1-213ENST00000428546 CDC42BPGQ6DT37 1551 aa16.7■□□□□ 0.26
KCNMA1-213ENST00000428546 ABCC11Q96J66 1382 aa16.69■□□□□ 0.26
KCNMA1-213ENST00000428546 JCADQ9P266 1359 aa16.69■□□□□ 0.26
KCNMA1-213ENST00000428546 PLEKHH1Q9ULM0 1364 aa16.69■□□□□ 0.26
KCNMA1-213ENST00000428546 NUTM2FA1L443 756 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms