RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.47■■■■□ 3.11
GLI3-202ENST00000428534 CCDC144AA2RUR9 1427 aa34.47■■■■□ 3.11
GLI3-202ENST00000428534 MED14O60244 1454 aa34.46■■■■□ 3.11
GLI3-202ENST00000428534 SCAF11Q99590 1463 aaKnown RBP34.46■■■■□ 3.11
GLI3-202ENST00000428534 CLTCL1P53675 1640 aa34.42■■■■□ 3.1
GLI3-202ENST00000428534 NPHP4O75161 1426 aaPredicted RBP34.41■■■■□ 3.1
GLI3-202ENST00000428534 LTKP29376 864 aa34.4■■■■□ 3.1
GLI3-202ENST00000428534 ZNF326Q5BKZ1 582 aaKnown RBP34.4■■■■□ 3.1
GLI3-202ENST00000428534 CPS1P31327 1500 aa34.39■■■■□ 3.1
GLI3-202ENST00000428534 RIMS2Q9UQ26 1411 aa34.38■■■■□ 3.09
GLI3-202ENST00000428534 KIF1BO60333 1816 aa34.38■■■■□ 3.09
GLI3-202ENST00000428534 PPP1R15AO75807 674 aaPredicted RBP34.37■■■■□ 3.09
GLI3-202ENST00000428534 IQGAP1P46940 1657 aa34.35■■■■□ 3.09
GLI3-202ENST00000428534 ZFYVE9O95405 1425 aa34.35■■■■□ 3.09
GLI3-202ENST00000428534 RPGRIP1LQ68CZ1 1315 aa34.34■■■■□ 3.09
GLI3-202ENST00000428534 ANKRD30BQ9BXX2 1392 aa34.33■■■■□ 3.09
GLI3-202ENST00000428534 MYO5BQ9ULV0 1848 aa34.31■■■■□ 3.08
GLI3-202ENST00000428534 PLEKHG1Q9ULL1 1385 aa34.28■■■■□ 3.08
GLI3-202ENST00000428534 STRCP1A6NGW2 1772 aa34.28■■■■□ 3.08
GLI3-202ENST00000428534 BCANQ96GW7 911 aa34.27■■■■□ 3.08
GLI3-202ENST00000428534 VGFO15240 615 aaPredicted RBP34.25■■■■□ 3.07
GLI3-202ENST00000428534 PCGF6Q9BYE7 350 aa34.24■■■■□ 3.07
GLI3-202ENST00000428534 SOCS7O14512 581 aa34.21■■■■□ 3.07
GLI3-202ENST00000428534 PIP4K2BP78356 416 aa34.21■■■■□ 3.07
GLI3-202ENST00000428534 SCAF1Q9H7N4 1312 aaKnown RBP34.21■■■■□ 3.07
GLI3-202ENST00000428534 SPATA31E1Q6ZUB1 1445 aa34.21■■■■□ 3.07
GLI3-202ENST00000428534 ALKQ9UM73 1620 aa34.2■■■■□ 3.07
GLI3-202ENST00000428534 RGL3Q3MIN7 710 aa34.18■■■■□ 3.06
GLI3-202ENST00000428534 NEXMIFQ5QGS0 1516 aa34.18■■■■□ 3.06
GLI3-202ENST00000428534 TOM1O60784 492 aa34.17■■■■□ 3.06
GLI3-202ENST00000428534 NUTM2DQ5VT03 806 aaPredicted RBP34.17■■■■□ 3.06
GLI3-202ENST00000428534 HSPA1LP34931 641 aa34.16■■■■□ 3.06
GLI3-202ENST00000428534 TBX22Q9Y458 520 aa34.16■■■■□ 3.06
GLI3-202ENST00000428534 DHX57Q6P158 1386 aaKnown RBP34.13■■■■□ 3.05
GLI3-202ENST00000428534 STAC3Q96MF2 364 aa34.12■■■■□ 3.05
GLI3-202ENST00000428534 SLC26A8Q96RN1 970 aa34.12■■■■□ 3.05
GLI3-202ENST00000428534 LRRC7Q96NW7 1537 aa34.11■■■■□ 3.05
GLI3-202ENST00000428534 DIP2AQ14689 1571 aa34.11■■■■□ 3.05
GLI3-202ENST00000428534 PIK3R4Q99570 1358 aa34.07■■■■□ 3.04
GLI3-202ENST00000428534 SETBP1Q9Y6X0 1596 aa34.06■■■■□ 3.04
GLI3-202ENST00000428534 MED1Q15648 1581 aaPredicted RBP34.06■■■■□ 3.04
GLI3-202ENST00000428534 PPLO60437 1756 aa34.06■■■■□ 3.04
GLI3-202ENST00000428534 KCNA6P17658 529 aa34.04■■■■□ 3.04
GLI3-202ENST00000428534 ADAMTS13Q76LX8 1427 aa34.04■■■■□ 3.04
GLI3-202ENST00000428534 XIRP1Q702N8 1843 aaKnown RBP34.01■■■■□ 3.03
GLI3-202ENST00000428534 SENP3Q9H4L4 574 aaPredicted RBP34■■■■□ 3.03
GLI3-202ENST00000428534 MYOM2P54296 1465 aa33.97■■■■□ 3.03
GLI3-202ENST00000428534 IFT172Q9UG01 1749 aa33.97■■■■□ 3.03
GLI3-202ENST00000428534 ADGRF5Q8IZF2 1346 aa33.95■■■■□ 3.03
GLI3-202ENST00000428534 DCAF11Q8TEB1 546 aa33.94■■■■□ 3.02
GLI3-202ENST00000428534 NRXN3Q9Y4C0 1643 aa33.93■■■■□ 3.02
GLI3-202ENST00000428534 NKTRP30414 1462 aaKnown RBP33.91■■■■□ 3.02
GLI3-202ENST00000428534 NWD1Q149M9 1564 aa33.9■■■■□ 3.02
GLI3-202ENST00000428534 PIK3C2GO75747 1445 aa33.89■■■■□ 3.02
GLI3-202ENST00000428534 SIN3AQ96ST3 1273 aa33.89■■■■□ 3.02
GLI3-202ENST00000428534 NRXN1Q9ULB1 1477 aa33.88■■■■□ 3.01
GLI3-202ENST00000428534 NEUROD1Q13562 356 aa33.88■■■■□ 3.01
GLI3-202ENST00000428534 CHD2O14647 1828 aaKnown RBP33.88■■■■□ 3.01
GLI3-202ENST00000428534 AMOTL2Q9Y2J4 779 aa33.87■■■■□ 3.01
GLI3-202ENST00000428534 KDM2AQ9Y2K7 1162 aa33.87■■■■□ 3.01
GLI3-202ENST00000428534 CLSPNQ9HAW4 1339 aa33.86■■■■□ 3.01
GLI3-202ENST00000428534 PROSER2Q86WR7 435 aaPredicted RBP33.86■■■■□ 3.01
GLI3-202ENST00000428534 METP08581 1390 aa33.85■■■■□ 3.01
GLI3-202ENST00000428534 C14orf93Q9H972 538 aaKnown RBP33.84■■■■□ 3.01
GLI3-202ENST00000428534 NCOA3Q9Y6Q9 1424 aa33.8■■■■□ 3
GLI3-202ENST00000428534 LAMC1P11047 1609 aa33.79■■■■□ 3
GLI3-202ENST00000428534 PTPRUQ92729 1446 aa33.78■■■■□ 3
GLI3-202ENST00000428534 TMEM94Q12767 1356 aa33.76■■■■□ 3
GLI3-202ENST00000428534 L3MBTL2Q969R5 705 aa33.76■■■□□ 2.99
GLI3-202ENST00000428534 SETD1AO15047 1707 aaKnown RBP33.76■■■□□ 2.99
GLI3-202ENST00000428534 CFAP70Q5T0N1 1121 aa33.74■■■□□ 2.99
GLI3-202ENST00000428534 TONSLQ96HA7 1378 aa33.73■■■□□ 2.99
GLI3-202ENST00000428534 XRN1Q8IZH2 1706 aaKnown RBP33.72■■■□□ 2.99
GLI3-202ENST00000428534 PRAG1Q86YV5 1406 aa33.71■■■□□ 2.99
GLI3-202ENST00000428534 CCER1Q8TC90 406 aaPredicted RBP33.7■■■□□ 2.99
GLI3-202ENST00000428534 PHF23Q9BUL5 403 aaPredicted RBP33.7■■■□□ 2.99
GLI3-202ENST00000428534 LRPPRCP42704 1394 aaKnown RBP33.7■■■□□ 2.98
GLI3-202ENST00000428534 PTCH1Q13635 1447 aa33.69■■■□□ 2.98
GLI3-202ENST00000428534 C14orf37Q86TY3 774 aa33.68■■■□□ 2.98
GLI3-202ENST00000428534 MSH6P52701 1360 aa33.68■■■□□ 2.98
GLI3-202ENST00000428534 ABCC11Q96J66 1382 aa33.68■■■□□ 2.98
GLI3-202ENST00000428534 TMEM132EQ6IEE7 984 aa33.67■■■□□ 2.98
GLI3-202ENST00000428534 RBM33Q96EV2 1170 aaKnown RBP33.67■■■□□ 2.98
GLI3-202ENST00000428534 YTHDC2Q9H6S0 1430 aaKnown RBP33.65■■■□□ 2.98
GLI3-202ENST00000428534 SIRT1Q96EB6 747 aa33.65■■■□□ 2.98
GLI3-202ENST00000428534 TIMELESSQ9UNS1 1208 aa33.64■■■□□ 2.98
GLI3-202ENST00000428534 ROBO1Q9Y6N7 1651 aa33.64■■■□□ 2.98
GLI3-202ENST00000428534 TECPR2O15040 1411 aa33.63■■■□□ 2.97
GLI3-202ENST00000428534 FAM135BQ49AJ0 1406 aa33.63■■■□□ 2.97
GLI3-202ENST00000428534 C19orf44Q9H6X5 657 aa33.63■■■□□ 2.97
GLI3-202ENST00000428534 STK26Q9P289 416 aa33.62■■■□□ 2.97
GLI3-202ENST00000428534 KIAA1210Q9ULL0 1709 aa33.59■■■□□ 2.97
GLI3-202ENST00000428534 ASXL1Q8IXJ9 1541 aa33.59■■■□□ 2.97
GLI3-202ENST00000428534 ROBO2Q9HCK4 1378 aa33.58■■■□□ 2.97
GLI3-202ENST00000428534 CADPS2Q86UW7 1296 aa33.57■■■□□ 2.96
GLI3-202ENST00000428534 ATF3P18847 181 aa33.56■■■□□ 2.96
GLI3-202ENST00000428534 KNDC1Q76NI1 1749 aa33.56■■■□□ 2.96
GLI3-202ENST00000428534 ADGRB1O14514 1584 aa33.55■■■□□ 2.96
GLI3-202ENST00000428534 DCCP43146 1447 aa33.53■■■□□ 2.96
GLI3-202ENST00000428534 ADGRL3Q9HAR2 1447 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms