RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 IQSEC2Q5JU85 1478 aa24.89■■□□□ 1.58
VRK2-204ENST00000428021 FOXD1Q16676 465 aa24.89■■□□□ 1.58
VRK2-204ENST00000428021 STRCP1A6NGW2 1772 aa24.89■■□□□ 1.57
VRK2-204ENST00000428021 ACIN1Q9UKV3 1341 aaKnown RBP24.87■■□□□ 1.57
VRK2-204ENST00000428021 CPS1P31327 1500 aa24.86■■□□□ 1.57
VRK2-204ENST00000428021 HDGFP51858 240 aaKnown RBP24.86■■□□□ 1.57
VRK2-204ENST00000428021 PLEKHG1Q9ULL1 1385 aa24.85■■□□□ 1.57
VRK2-204ENST00000428021 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.85■■□□□ 1.57
VRK2-204ENST00000428021 NUTM2DQ5VT03 806 aaPredicted RBP24.84■■□□□ 1.57
VRK2-204ENST00000428021 SLC26A8Q96RN1 970 aa24.84■■□□□ 1.57
VRK2-204ENST00000428021 KIF1BO60333 1816 aa24.82■■□□□ 1.56
VRK2-204ENST00000428021 PPP1R15AO75807 674 aaPredicted RBP24.82■■□□□ 1.56
VRK2-204ENST00000428021 SENP3Q9H4L4 574 aaPredicted RBP24.81■■□□□ 1.56
VRK2-204ENST00000428021 HRCP23327 699 aa24.8■■□□□ 1.56
VRK2-204ENST00000428021 ZNF326Q5BKZ1 582 aaKnown RBP24.78■■□□□ 1.56
VRK2-204ENST00000428021 BCANQ96GW7 911 aa24.78■■□□□ 1.56
VRK2-204ENST00000428021 LRRC7Q96NW7 1537 aa24.77■■□□□ 1.56
VRK2-204ENST00000428021 ADAMTS13Q76LX8 1427 aa24.77■■□□□ 1.56
VRK2-204ENST00000428021 NEXMIFQ5QGS0 1516 aa24.76■■□□□ 1.55
VRK2-204ENST00000428021 TBX22Q9Y458 520 aa24.75■■□□□ 1.55
VRK2-204ENST00000428021 KCNA6P17658 529 aa24.74■■□□□ 1.55
VRK2-204ENST00000428021 CCDC144AA2RUR9 1427 aa24.73■■□□□ 1.55
VRK2-204ENST00000428021 NRXN3Q9Y4C0 1643 aa24.71■■□□□ 1.55
VRK2-204ENST00000428021 NWD1Q149M9 1564 aa24.71■■□□□ 1.55
VRK2-204ENST00000428021 UBAP1LF5GYI3 381 aa24.7■■□□□ 1.54
VRK2-204ENST00000428021 DIP2AQ14689 1571 aa24.7■■□□□ 1.54
VRK2-204ENST00000428021 CHD2O14647 1828 aaKnown RBP24.7■■□□□ 1.54
VRK2-204ENST00000428021 SETBP1Q9Y6X0 1596 aa24.69■■□□□ 1.54
VRK2-204ENST00000428021 XIRP1Q702N8 1843 aaKnown RBP24.69■■□□□ 1.54
VRK2-204ENST00000428021 SPATA31E1Q6ZUB1 1445 aa24.69■■□□□ 1.54
VRK2-204ENST00000428021 RPGRIP1LQ68CZ1 1315 aa24.67■■□□□ 1.54
VRK2-204ENST00000428021 PPLO60437 1756 aa24.65■■□□□ 1.54
VRK2-204ENST00000428021 PIK3R4Q99570 1358 aa24.65■■□□□ 1.54
VRK2-204ENST00000428021 ALKQ9UM73 1620 aa24.64■■□□□ 1.54
VRK2-204ENST00000428021 NKTRP30414 1462 aaKnown RBP24.64■■□□□ 1.54
VRK2-204ENST00000428021 ANKRD30BQ9BXX2 1392 aa24.64■■□□□ 1.53
VRK2-204ENST00000428021 VGFO15240 615 aaPredicted RBP24.63■■□□□ 1.53
VRK2-204ENST00000428021 RGL3Q3MIN7 710 aa24.63■■□□□ 1.53
VRK2-204ENST00000428021 PROSER2Q86WR7 435 aaPredicted RBP24.63■■□□□ 1.53
VRK2-204ENST00000428021 TMEM94Q12767 1356 aa24.63■■□□□ 1.53
VRK2-204ENST00000428021 PTPRUQ92729 1446 aa24.62■■□□□ 1.53
VRK2-204ENST00000428021 TOM1O60784 492 aa24.61■■□□□ 1.53
VRK2-204ENST00000428021 RBM33Q96EV2 1170 aaKnown RBP24.61■■□□□ 1.53
VRK2-204ENST00000428021 METP08581 1390 aa24.59■■□□□ 1.53
VRK2-204ENST00000428021 IFT172Q9UG01 1749 aa24.58■■□□□ 1.53
VRK2-204ENST00000428021 AMOTL2Q9Y2J4 779 aa24.57■■□□□ 1.52
VRK2-204ENST00000428021 ADGRF5Q8IZF2 1346 aa24.56■■□□□ 1.52
VRK2-204ENST00000428021 SETD1AO15047 1707 aaKnown RBP24.55■■□□□ 1.52
VRK2-204ENST00000428021 XRN1Q8IZH2 1706 aaKnown RBP24.55■■□□□ 1.52
VRK2-204ENST00000428021 PIP4K2BP78356 416 aa24.54■■□□□ 1.52
VRK2-204ENST00000428021 SCAF1Q9H7N4 1312 aaKnown RBP24.5■■□□□ 1.51
VRK2-204ENST00000428021 NCOA3Q9Y6Q9 1424 aa24.5■■□□□ 1.51
VRK2-204ENST00000428021 TRIM26Q12899 539 aaPredicted RBP24.49■■□□□ 1.51
VRK2-204ENST00000428021 PIK3C2GO75747 1445 aa24.46■■□□□ 1.51
VRK2-204ENST00000428021 MSH6P52701 1360 aa24.46■■□□□ 1.51
VRK2-204ENST00000428021 NRXN1Q9ULB1 1477 aa24.45■■□□□ 1.5
VRK2-204ENST00000428021 MYOM2P54296 1465 aa24.44■■□□□ 1.5
VRK2-204ENST00000428021 HSPA1LP34931 641 aa24.43■■□□□ 1.5
VRK2-204ENST00000428021 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.41■■□□□ 1.5
VRK2-204ENST00000428021 C19orf44Q9H6X5 657 aa24.41■■□□□ 1.5
VRK2-204ENST00000428021 PRAG1Q86YV5 1406 aa24.41■■□□□ 1.5
VRK2-204ENST00000428021 C14orf37Q86TY3 774 aa24.4■■□□□ 1.5
VRK2-204ENST00000428021 ROBO2Q9HCK4 1378 aa24.4■■□□□ 1.5
VRK2-204ENST00000428021 ASXL1Q8IXJ9 1541 aa24.4■■□□□ 1.5
VRK2-204ENST00000428021 PTCH1Q13635 1447 aa24.39■■□□□ 1.5
VRK2-204ENST00000428021 FAM135BQ49AJ0 1406 aa24.39■■□□□ 1.5
VRK2-204ENST00000428021 C14orf93Q9H972 538 aaKnown RBP24.39■■□□□ 1.49
VRK2-204ENST00000428021 DHX57Q6P158 1386 aaKnown RBP24.39■■□□□ 1.49
VRK2-204ENST00000428021 SLAIN2Q9P270 581 aa24.37■■□□□ 1.49
VRK2-204ENST00000428021 TMEM132EQ6IEE7 984 aa24.36■■□□□ 1.49
VRK2-204ENST00000428021 DCAF11Q8TEB1 546 aa24.36■■□□□ 1.49
VRK2-204ENST00000428021 CFAP70Q5T0N1 1121 aa24.35■■□□□ 1.49
VRK2-204ENST00000428021 ROBO1Q9Y6N7 1651 aa24.34■■□□□ 1.49
VRK2-204ENST00000428021 LRPPRCP42704 1394 aaKnown RBP24.34■■□□□ 1.49
VRK2-204ENST00000428021 CADPS2Q86UW7 1296 aa24.34■■□□□ 1.49
VRK2-204ENST00000428021 KDM2AQ9Y2K7 1162 aa24.34■■□□□ 1.49
VRK2-204ENST00000428021 ADGRL3Q9HAR2 1447 aa24.34■■□□□ 1.49
VRK2-204ENST00000428021 NALCNQ8IZF0 1738 aa24.33■■□□□ 1.49
VRK2-204ENST00000428021 ATF3P18847 181 aa24.33■■□□□ 1.49
VRK2-204ENST00000428021 DCCP43146 1447 aa24.33■■□□□ 1.49
VRK2-204ENST00000428021 STAC3Q96MF2 364 aa24.32■■□□□ 1.48
VRK2-204ENST00000428021 STK26Q9P289 416 aa24.32■■□□□ 1.48
VRK2-204ENST00000428021 TECPR2O15040 1411 aa24.32■■□□□ 1.48
VRK2-204ENST00000428021 LAMC1P11047 1609 aa24.32■■□□□ 1.48
VRK2-204ENST00000428021 ABCC11Q96J66 1382 aa24.31■■□□□ 1.48
VRK2-204ENST00000428021 YTHDC2Q9H6S0 1430 aaKnown RBP24.3■■□□□ 1.48
VRK2-204ENST00000428021 KNDC1Q76NI1 1749 aa24.3■■□□□ 1.48
VRK2-204ENST00000428021 SIN3AQ96ST3 1273 aa24.28■■□□□ 1.48
VRK2-204ENST00000428021 WAPLQ7Z5K2 1190 aa24.26■■□□□ 1.47
VRK2-204ENST00000428021 MST1RQ04912 1400 aa24.26■■□□□ 1.47
VRK2-204ENST00000428021 ADGRB1O14514 1584 aa24.25■■□□□ 1.47
VRK2-204ENST00000428021 SIRT1Q96EB6 747 aa24.24■■□□□ 1.47
VRK2-204ENST00000428021 PLEKHH1Q9ULM0 1364 aa24.24■■□□□ 1.47
VRK2-204ENST00000428021 BRINP3Q76B58 766 aa24.21■■□□□ 1.47
VRK2-204ENST00000428021 NEUROD1Q13562 356 aa24.19■■□□□ 1.46
VRK2-204ENST00000428021 L3MBTL2Q969R5 705 aa24.19■■□□□ 1.46
VRK2-204ENST00000428021 PHLPP1O60346 1717 aa24.18■■□□□ 1.46
VRK2-204ENST00000428021 DLC1Q96QB1 1528 aa24.17■■□□□ 1.46
VRK2-204ENST00000428021 C1orf167Q5SNV9 1468 aa24.17■■□□□ 1.46
VRK2-204ENST00000428021 AHDC1Q5TGY3 1603 aaPredicted RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms