RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 NECTIN2Q92692 538 aa12.27□□□□□ -0.45
CLTCL1-202ENST00000427926 GBP4Q96PP9 640 aa12.27□□□□□ -0.45
CLTCL1-202ENST00000427926 TPD52L1Q16890 204 aaPredicted RBP12.27□□□□□ -0.45
CLTCL1-202ENST00000427926 TXNDC2Q86VQ3 553 aa12.27□□□□□ -0.45
CLTCL1-202ENST00000427926 RILPL2Q969X0 211 aa12.26□□□□□ -0.45
CLTCL1-202ENST00000427926 H3BQV1 296 aa12.26□□□□□ -0.45
CLTCL1-202ENST00000427926 IFFO2Q5TF58 517 aa12.26□□□□□ -0.45
CLTCL1-202ENST00000427926 NOP58Q9Y2X3 529 aaKnown RBP12.26□□□□□ -0.45
CLTCL1-202ENST00000427926 RBM42Q9BTD8 480 aaKnown RBP12.26□□□□□ -0.45
CLTCL1-202ENST00000427926 IFT140Q96RY7 1462 aa12.25□□□□□ -0.45
CLTCL1-202ENST00000427926 MFAP1P55081 439 aaKnown RBP12.25□□□□□ -0.45
CLTCL1-202ENST00000427926 FAM184AQ8NB25 1140 aa12.25□□□□□ -0.45
CLTCL1-202ENST00000427926 R3HCC1Q9Y3T6 440 aaKnown RBP12.25□□□□□ -0.45
CLTCL1-202ENST00000427926 NLRP6P59044 892 aa12.25□□□□□ -0.45
CLTCL1-202ENST00000427926 RBM19Q9Y4C8 960 aaKnown RBP12.25□□□□□ -0.45
CLTCL1-202ENST00000427926 MSNP26038 577 aaKnown RBP12.25□□□□□ -0.45
CLTCL1-202ENST00000427926 L3MBTL2Q969R5 705 aa12.25□□□□□ -0.45
CLTCL1-202ENST00000427926 TPM2P07951 284 aa12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 THEMISQ8N1K5 641 aaPredicted RBP12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 GAPVD1Q14C86 1478 aa12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 TRIM29Q14134 588 aa12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 DIAPH3Q9NSV4 1193 aa12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 RAD54L2Q9Y4B4 1467 aa12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 ERICH2A1L162 156 aa12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 FAM177BA6PVY3 158 aa12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 DIAPH1O60610 1272 aaKnown RBP12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 TPM3P06753 285 aa12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 PTMSP20962 102 aa12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 IKQ13123 557 aaPredicted RBP12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 CCDC27Q2M243 656 aa12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 IFIT2P09913 472 aaKnown RBP12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 TRDNQ13061 729 aa12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 NLRP13Q86W25 1043 aa12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 CFTRP13569 1480 aa12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 DHX57Q6P158 1386 aaKnown RBP12.24□□□□□ -0.45
CLTCL1-202ENST00000427926 G3BP1Q13283 466 aaKnown RBP eCLIP12.23□□□□□ -0.45
CLTCL1-202ENST00000427926 RIC3Q7Z5B4 369 aa12.23□□□□□ -0.45
CLTCL1-202ENST00000427926 NAP1L5Q96NT1 182 aaPredicted RBP12.23□□□□□ -0.45
CLTCL1-202ENST00000427926 PDE3BQ13370 1112 aa12.23□□□□□ -0.45
CLTCL1-202ENST00000427926 FYB1O15117 783 aa12.23□□□□□ -0.45
CLTCL1-202ENST00000427926 DNAJC5BQ9UF47 199 aa12.23□□□□□ -0.45
CLTCL1-202ENST00000427926 LAMC3Q9Y6N6 1575 aa12.22□□□□□ -0.45
CLTCL1-202ENST00000427926 ABTB2Q8N961 1025 aa12.22□□□□□ -0.45
CLTCL1-202ENST00000427926 CCDC47Q96A33 483 aaKnown RBP12.22□□□□□ -0.45
CLTCL1-202ENST00000427926 PKNOX2Q96KN3 472 aa12.22□□□□□ -0.45
CLTCL1-202ENST00000427926 IGF1RP08069 1367 aa12.22□□□□□ -0.45
CLTCL1-202ENST00000427926 PANK3Q9H999 370 aa12.21□□□□□ -0.45
CLTCL1-202ENST00000427926 TCERG1O14776 1098 aaKnown RBP12.21□□□□□ -0.45
CLTCL1-202ENST00000427926 HMGB2P26583 209 aaKnown RBP12.21□□□□□ -0.45
CLTCL1-202ENST00000427926 AIMP1Q12904 312 aaKnown RBP12.21□□□□□ -0.45
CLTCL1-202ENST00000427926 FKBP5Q13451 457 aaPredicted RBP12.21□□□□□ -0.45
CLTCL1-202ENST00000427926 KIF6Q6ZMV9 814 aa12.21□□□□□ -0.45
CLTCL1-202ENST00000427926 TSHZ2Q9NRE2 1034 aa12.21□□□□□ -0.45
CLTCL1-202ENST00000427926 TSR1Q2NL82 804 aaKnown RBP12.21□□□□□ -0.45
CLTCL1-202ENST00000427926 NFXL1Q6ZNB6 911 aa12.21□□□□□ -0.45
CLTCL1-202ENST00000427926 ST18O60284 1047 aa12.21□□□□□ -0.46
CLTCL1-202ENST00000427926 PHLDB1Q86UU1 1377 aa12.2□□□□□ -0.46
CLTCL1-202ENST00000427926 CPLX1O14810 134 aa12.2□□□□□ -0.46
CLTCL1-202ENST00000427926 RUFY2Q8WXA3 655 aa12.2□□□□□ -0.46
CLTCL1-202ENST00000427926 TSPYL4Q9UJ04 414 aa12.2□□□□□ -0.46
CLTCL1-202ENST00000427926 PLIN1O60240 522 aa12.2□□□□□ -0.46
CLTCL1-202ENST00000427926 WWC2Q6AWC2 1192 aa12.2□□□□□ -0.46
CLTCL1-202ENST00000427926 TOM1L2Q6ZVM7 507 aa12.2□□□□□ -0.46
CLTCL1-202ENST00000427926 ANKLE2Q86XL3 938 aa12.2□□□□□ -0.46
CLTCL1-202ENST00000427926 ST20-MTHFSA0A0A6YYL1 179 aa12.19□□□□□ -0.46
CLTCL1-202ENST00000427926 POGZQ7Z3K3 1410 aa12.19□□□□□ -0.46
CLTCL1-202ENST00000427926 GRIN2BQ13224 1484 aa12.19□□□□□ -0.46
CLTCL1-202ENST00000427926 SLC4A3P48751 1232 aa12.18□□□□□ -0.46
CLTCL1-202ENST00000427926 MCTP1Q6DN14 999 aa12.18□□□□□ -0.46
CLTCL1-202ENST00000427926 NEUROD6Q96NK8 337 aa12.18□□□□□ -0.46
CLTCL1-202ENST00000427926 MIA2Q96PC5 1412 aa12.18□□□□□ -0.46
CLTCL1-202ENST00000427926 TMEM132AQ24JP5 1023 aa12.18□□□□□ -0.46
CLTCL1-202ENST00000427926 TATP17735 454 aaPredicted RBP12.17□□□□□ -0.46
CLTCL1-202ENST00000427926 ZKSCAN1P17029 563 aaPredicted RBP12.17□□□□□ -0.46
CLTCL1-202ENST00000427926 SMG6Q86US8 1419 aaKnown RBP12.17□□□□□ -0.46
CLTCL1-202ENST00000427926 ANKRD45Q5TZF3 282 aa12.16□□□□□ -0.46
CLTCL1-202ENST00000427926 DDX54Q8TDD1 881 aaKnown RBP12.16□□□□□ -0.46
CLTCL1-202ENST00000427926 BCL2L13Q9BXK5 485 aa12.16□□□□□ -0.46
CLTCL1-202ENST00000427926 PLEKHO1Q53GL0 409 aaPredicted RBP12.15□□□□□ -0.46
CLTCL1-202ENST00000427926 FBXO3Q9UK99 471 aa12.15□□□□□ -0.46
CLTCL1-202ENST00000427926 MTMR7Q9Y216 660 aa12.15□□□□□ -0.46
CLTCL1-202ENST00000427926 RIPK4P57078 832 aa12.15□□□□□ -0.46
CLTCL1-202ENST00000427926 ZKSCAN2Q63HK3 967 aa12.15□□□□□ -0.46
CLTCL1-202ENST00000427926 PCMTD1Q96MG8 357 aaPredicted RBP12.15□□□□□ -0.46
CLTCL1-202ENST00000427926 KIF15Q9NS87 1388 aa12.15□□□□□ -0.46
CLTCL1-202ENST00000427926 AQRO60306 1485 aaKnown RBP eCLIP12.15□□□□□ -0.463e-7■■■■■ 30.5
CLTCL1-202ENST00000427926 TPM1P09493 284 aa12.15□□□□□ -0.46
CLTCL1-202ENST00000427926 WASHC4Q2M389 1173 aa12.15□□□□□ -0.46
CLTCL1-202ENST00000427926 PAXIP1Q6ZW49 1069 aaPredicted RBP12.15□□□□□ -0.46
CLTCL1-202ENST00000427926 PAF1Q8N7H5 531 aa12.15□□□□□ -0.46
CLTCL1-202ENST00000427926 PRDM11Q9NQV5 511 aa12.15□□□□□ -0.46
CLTCL1-202ENST00000427926 WDHD1O75717 1129 aaPredicted RBP12.15□□□□□ -0.46
CLTCL1-202ENST00000427926 SLKQ9H2G2 1235 aaPredicted RBP12.14□□□□□ -0.47
CLTCL1-202ENST00000427926 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.14□□□□□ -0.479e-9■■■■■ 111.8
CLTCL1-202ENST00000427926 FOXD4L1Q9NU39 408 aa12.14□□□□□ -0.47
CLTCL1-202ENST00000427926 API5Q9BZZ5 524 aaKnown RBP12.14□□□□□ -0.47
CLTCL1-202ENST00000427926 HSP90AB4PQ58FF6 505 aa12.14□□□□□ -0.47
CLTCL1-202ENST00000427926 RBM5P52756 815 aaKnown RBP eCLIP12.13□□□□□ -0.47
CLTCL1-202ENST00000427926 NESP48681 1621 aa12.13□□□□□ -0.47
CLTCL1-202ENST00000427926 RNF20Q5VTR2 975 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms