RNA–Protein interactions for RNA: ENST00000427771.1

TRAK1-205, Transcript of trafficking kinesin protein 1, humanhuman

TSL 3

Gene TRAK1, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-205ENST00000427771 LRRC7Q96NW7 1537 aa28.7■■■□□ 2.19
TRAK1-205ENST00000427771 UBAP1LF5GYI3 381 aa28.68■■■□□ 2.18
TRAK1-205ENST00000427771 SLC26A8Q96RN1 970 aa28.68■■■□□ 2.18
TRAK1-205ENST00000427771 PLEKHG1Q9ULL1 1385 aa28.66■■■□□ 2.18
TRAK1-205ENST00000427771 PPP1R15AO75807 674 aaPredicted RBP28.65■■■□□ 2.18
TRAK1-205ENST00000427771 NUTM2DQ5VT03 806 aaPredicted RBP28.65■■■□□ 2.18
TRAK1-205ENST00000427771 XIRP1Q702N8 1843 aaKnown RBP28.64■■■□□ 2.17
TRAK1-205ENST00000427771 SLC4A1APQ9BWU0 796 aaKnown RBP28.63■■■□□ 2.17
TRAK1-205ENST00000427771 BCANQ96GW7 911 aa28.62■■■□□ 2.17
TRAK1-205ENST00000427771 ALKQ9UM73 1620 aa28.61■■■□□ 2.17
TRAK1-205ENST00000427771 NWD1Q149M9 1564 aa28.6■■■□□ 2.17
TRAK1-205ENST00000427771 KIF1BO60333 1816 aa28.59■■■□□ 2.17
TRAK1-205ENST00000427771 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.59■■■□□ 2.17
TRAK1-205ENST00000427771 HDGFP51858 240 aaKnown RBP28.58■■■□□ 2.17
TRAK1-205ENST00000427771 SETD5Q9C0A6 1442 aa28.57■■■□□ 2.16
TRAK1-205ENST00000427771 FOXD1Q16676 465 aa28.56■■■□□ 2.16
TRAK1-205ENST00000427771 ADAMTS13Q76LX8 1427 aa28.56■■■□□ 2.16
TRAK1-205ENST00000427771 CHD2O14647 1828 aaKnown RBP28.55■■■□□ 2.16
TRAK1-205ENST00000427771 KCNA6P17658 529 aa28.54■■■□□ 2.16
TRAK1-205ENST00000427771 NEXMIFQ5QGS0 1516 aa28.53■■■□□ 2.16
TRAK1-205ENST00000427771 ZNF326Q5BKZ1 582 aaKnown RBP28.53■■■□□ 2.16
TRAK1-205ENST00000427771 NRXN3Q9Y4C0 1643 aa28.53■■■□□ 2.16
TRAK1-205ENST00000427771 DIP2AQ14689 1571 aa28.53■■■□□ 2.16
TRAK1-205ENST00000427771 PIP4K2BP78356 416 aa28.52■■■□□ 2.16
TRAK1-205ENST00000427771 NKTRP30414 1462 aaKnown RBP28.52■■■□□ 2.16
TRAK1-205ENST00000427771 SCAF1Q9H7N4 1312 aaKnown RBP28.51■■■□□ 2.15
TRAK1-205ENST00000427771 TOM1O60784 492 aa28.51■■■□□ 2.15
TRAK1-205ENST00000427771 TMEM94Q12767 1356 aa28.5■■■□□ 2.15
TRAK1-205ENST00000427771 RAB3GAP2Q9H2M9 1393 aa28.5■■■□□ 2.15
TRAK1-205ENST00000427771 MPHOSPH9Q99550 1183 aa28.49■■■□□ 2.15
TRAK1-205ENST00000427771 RBM33Q96EV2 1170 aaKnown RBP28.48■■■□□ 2.15
TRAK1-205ENST00000427771 TBX22Q9Y458 520 aa28.48■■■□□ 2.15
TRAK1-205ENST00000427771 SETBP1Q9Y6X0 1596 aa28.48■■■□□ 2.15
TRAK1-205ENST00000427771 PROSER2Q86WR7 435 aaPredicted RBP28.44■■■□□ 2.14
TRAK1-205ENST00000427771 PPLO60437 1756 aa28.42■■■□□ 2.14
TRAK1-205ENST00000427771 CCDC144AA2RUR9 1427 aa28.41■■■□□ 2.14
TRAK1-205ENST00000427771 PTPRUQ92729 1446 aa28.4■■■□□ 2.14
TRAK1-205ENST00000427771 PIK3R4Q99570 1358 aa28.38■■■□□ 2.13
TRAK1-205ENST00000427771 HSPA1LP34931 641 aa28.38■■■□□ 2.13
TRAK1-205ENST00000427771 XRN1Q8IZH2 1706 aaKnown RBP28.38■■■□□ 2.13
TRAK1-205ENST00000427771 ACIN1Q9UKV3 1341 aaKnown RBP28.35■■■□□ 2.13
TRAK1-205ENST00000427771 METP08581 1390 aa28.35■■■□□ 2.13
TRAK1-205ENST00000427771 SETD1AO15047 1707 aaKnown RBP28.34■■■□□ 2.13
TRAK1-205ENST00000427771 SPATA31E1Q6ZUB1 1445 aa28.34■■■□□ 2.13
TRAK1-205ENST00000427771 IFT172Q9UG01 1749 aa28.32■■■□□ 2.12
TRAK1-205ENST00000427771 AMOTL2Q9Y2J4 779 aa28.31■■■□□ 2.12
TRAK1-205ENST00000427771 RPGRIP1LQ68CZ1 1315 aa28.31■■■□□ 2.12
TRAK1-205ENST00000427771 MSH6P52701 1360 aa28.3■■■□□ 2.12
TRAK1-205ENST00000427771 VGFO15240 615 aaPredicted RBP28.28■■■□□ 2.12
TRAK1-205ENST00000427771 RGL3Q3MIN7 710 aa28.27■■■□□ 2.12
TRAK1-205ENST00000427771 ROBO1Q9Y6N7 1651 aa28.26■■■□□ 2.12
TRAK1-205ENST00000427771 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.26■■■□□ 2.11
TRAK1-205ENST00000427771 NCOA3Q9Y6Q9 1424 aa28.25■■■□□ 2.11
TRAK1-205ENST00000427771 C14orf37Q86TY3 774 aa28.23■■■□□ 2.11
TRAK1-205ENST00000427771 FAM135BQ49AJ0 1406 aa28.22■■■□□ 2.11
TRAK1-205ENST00000427771 ADGRF5Q8IZF2 1346 aa28.21■■■□□ 2.11
TRAK1-205ENST00000427771 DISP3Q9P2K9 1392 aa28.2■■■□□ 2.1
TRAK1-205ENST00000427771 HRCP23327 699 aa28.19■■■□□ 2.1
TRAK1-205ENST00000427771 ANKRD30BQ9BXX2 1392 aa28.19■■■□□ 2.1
TRAK1-205ENST00000427771 NALCNQ8IZF0 1738 aa28.17■■■□□ 2.1
TRAK1-205ENST00000427771 SLAIN2Q9P270 581 aa28.16■■■□□ 2.1
TRAK1-205ENST00000427771 C19orf44Q9H6X5 657 aa28.15■■■□□ 2.1
TRAK1-205ENST00000427771 PIK3C2GO75747 1445 aa28.14■■■□□ 2.1
TRAK1-205ENST00000427771 MED1Q15648 1581 aaPredicted RBP28.14■■■□□ 2.1
TRAK1-205ENST00000427771 PTCH1Q13635 1447 aa28.13■■■□□ 2.09
TRAK1-205ENST00000427771 ASXL1Q8IXJ9 1541 aa28.13■■■□□ 2.09
TRAK1-205ENST00000427771 ROBO2Q9HCK4 1378 aa28.12■■■□□ 2.09
TRAK1-205ENST00000427771 PRAG1Q86YV5 1406 aa28.11■■■□□ 2.09
TRAK1-205ENST00000427771 DCCP43146 1447 aa28.1■■■□□ 2.09
TRAK1-205ENST00000427771 ADGRL3Q9HAR2 1447 aa28.1■■■□□ 2.09
TRAK1-205ENST00000427771 ATF3P18847 181 aa28.1■■■□□ 2.09
TRAK1-205ENST00000427771 CADPS2Q86UW7 1296 aa28.1■■■□□ 2.09
TRAK1-205ENST00000427771 MYOM2P54296 1465 aa28.09■■■□□ 2.09
TRAK1-205ENST00000427771 PHLPP1O60346 1717 aa28.09■■■□□ 2.09
TRAK1-205ENST00000427771 NRXN1Q9ULB1 1477 aa28.08■■■□□ 2.09
TRAK1-205ENST00000427771 MST1RQ04912 1400 aa28.04■■■□□ 2.08
TRAK1-205ENST00000427771 KNDC1Q76NI1 1749 aa28.02■■■□□ 2.08
TRAK1-205ENST00000427771 LAMC1P11047 1609 aa28.02■■■□□ 2.08
TRAK1-205ENST00000427771 COL16A1Q07092 1604 aaPredicted RBP28.02■■■□□ 2.08
TRAK1-205ENST00000427771 TMEM132EQ6IEE7 984 aa28.01■■■□□ 2.07
TRAK1-205ENST00000427771 TECPR2O15040 1411 aa28■■■□□ 2.07
TRAK1-205ENST00000427771 AHDC1Q5TGY3 1603 aaPredicted RBP28■■■□□ 2.07
TRAK1-205ENST00000427771 LRPPRCP42704 1394 aaKnown RBP27.99■■■□□ 2.07
TRAK1-205ENST00000427771 STK26Q9P289 416 aa27.99■■■□□ 2.07
TRAK1-205ENST00000427771 ILDR2Q71H61 639 aa27.98■■■□□ 2.07
TRAK1-205ENST00000427771 BRINP3Q76B58 766 aa27.98■■■□□ 2.07
TRAK1-205ENST00000427771 YTHDC2Q9H6S0 1430 aaKnown RBP27.96■■■□□ 2.07
TRAK1-205ENST00000427771 CFAP70Q5T0N1 1121 aa27.96■■■□□ 2.07
TRAK1-205ENST00000427771 C14orf93Q9H972 538 aaKnown RBP27.96■■■□□ 2.07
TRAK1-205ENST00000427771 ABCC11Q96J66 1382 aa27.94■■■□□ 2.06
TRAK1-205ENST00000427771 DHX57Q6P158 1386 aaKnown RBP27.93■■■□□ 2.06
TRAK1-205ENST00000427771 PLEKHH1Q9ULM0 1364 aa27.93■■■□□ 2.06
TRAK1-205ENST00000427771 NHSL1Q5SYE7 1610 aa27.92■■■□□ 2.06
TRAK1-205ENST00000427771 CDC42BPGQ6DT37 1551 aa27.92■■■□□ 2.06
TRAK1-205ENST00000427771 WAPLQ7Z5K2 1190 aa27.92■■■□□ 2.06
TRAK1-205ENST00000427771 DCAF11Q8TEB1 546 aa27.92■■■□□ 2.06
TRAK1-205ENST00000427771 KDM2AQ9Y2K7 1162 aa27.92■■■□□ 2.06
TRAK1-205ENST00000427771 C1orf167Q5SNV9 1468 aa27.91■■■□□ 2.06
TRAK1-205ENST00000427771 ADGRB1O14514 1584 aa27.9■■■□□ 2.06
TRAK1-205ENST00000427771 JCADQ9P266 1359 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms