RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 RIMS2Q9UQ26 1411 aa24.43■■□□□ 1.5
HLA-DQB2-230ENST00000427449 KIF1BO60333 1816 aa24.4■■□□□ 1.5
HLA-DQB2-230ENST00000427449 DIP2AQ14689 1571 aa24.4■■□□□ 1.5
HLA-DQB2-230ENST00000427449 PLEKHG1Q9ULL1 1385 aa24.4■■□□□ 1.5
HLA-DQB2-230ENST00000427449 SETD1AO15047 1707 aaKnown RBP24.39■■□□□ 1.5
HLA-DQB2-230ENST00000427449 ADAMTS13Q76LX8 1427 aa24.39■■□□□ 1.5
HLA-DQB2-230ENST00000427449 NEXMIFQ5QGS0 1516 aa24.39■■□□□ 1.49
HLA-DQB2-230ENST00000427449 NKTRP30414 1462 aaKnown RBP24.38■■□□□ 1.49
HLA-DQB2-230ENST00000427449 SETBP1Q9Y6X0 1596 aa24.37■■□□□ 1.49
HLA-DQB2-230ENST00000427449 XRN1Q8IZH2 1706 aaKnown RBP24.36■■□□□ 1.49
HLA-DQB2-230ENST00000427449 UBAP1LF5GYI3 381 aa24.36■■□□□ 1.49
HLA-DQB2-230ENST00000427449 EID1Q9Y6B2 187 aa24.35■■□□□ 1.49
HLA-DQB2-230ENST00000427449 PPLO60437 1756 aa24.32■■□□□ 1.48
HLA-DQB2-230ENST00000427449 IFT172Q9UG01 1749 aa24.31■■□□□ 1.48
HLA-DQB2-230ENST00000427449 STAG3Q9UJ98 1225 aa24.31■■□□□ 1.48
HLA-DQB2-230ENST00000427449 SLC26A8Q96RN1 970 aa24.29■■□□□ 1.48
HLA-DQB2-230ENST00000427449 PTPRUQ92729 1446 aa24.26■■□□□ 1.47
HLA-DQB2-230ENST00000427449 TMEM94Q12767 1356 aa24.25■■□□□ 1.47
HLA-DQB2-230ENST00000427449 ROBO1Q9Y6N7 1651 aa24.24■■□□□ 1.47
HLA-DQB2-230ENST00000427449 KCNA6P17658 529 aa24.24■■□□□ 1.47
HLA-DQB2-230ENST00000427449 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.22■■□□□ 1.47
HLA-DQB2-230ENST00000427449 MED1Q15648 1581 aaPredicted RBP24.22■■□□□ 1.47
HLA-DQB2-230ENST00000427449 TOM1O60784 492 aa24.19■■□□□ 1.46
HLA-DQB2-230ENST00000427449 HSPA1LP34931 641 aa24.19■■□□□ 1.46
HLA-DQB2-230ENST00000427449 NUTM2DQ5VT03 806 aaPredicted RBP24.18■■□□□ 1.46
HLA-DQB2-230ENST00000427449 TBX22Q9Y458 520 aa24.18■■□□□ 1.46
HLA-DQB2-230ENST00000427449 PIK3R4Q99570 1358 aa24.17■■□□□ 1.46
HLA-DQB2-230ENST00000427449 NALCNQ8IZF0 1738 aa24.17■■□□□ 1.46
HLA-DQB2-230ENST00000427449 PIP4K2BP78356 416 aa24.16■■□□□ 1.46
HLA-DQB2-230ENST00000427449 SENP3Q9H4L4 574 aaPredicted RBP24.16■■□□□ 1.46
HLA-DQB2-230ENST00000427449 CHGAP10645 457 aaKnown RBP24.15■■□□□ 1.46
HLA-DQB2-230ENST00000427449 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.15■■□□□ 1.46
HLA-DQB2-230ENST00000427449 RBM33Q96EV2 1170 aaKnown RBP24.14■■□□□ 1.45
HLA-DQB2-230ENST00000427449 SPATA31E1Q6ZUB1 1445 aa24.13■■□□□ 1.45
HLA-DQB2-230ENST00000427449 FAM135BQ49AJ0 1406 aa24.11■■□□□ 1.45
HLA-DQB2-230ENST00000427449 PRAG1Q86YV5 1406 aa24.11■■□□□ 1.45
HLA-DQB2-230ENST00000427449 NCOA3Q9Y6Q9 1424 aa24.11■■□□□ 1.45
HLA-DQB2-230ENST00000427449 METP08581 1390 aa24.11■■□□□ 1.45
HLA-DQB2-230ENST00000427449 PPP1R15AO75807 674 aaPredicted RBP24.1■■□□□ 1.45
HLA-DQB2-230ENST00000427449 COL16A1Q07092 1604 aaPredicted RBP24.09■■□□□ 1.45
HLA-DQB2-230ENST00000427449 ASXL1Q8IXJ9 1541 aa24.09■■□□□ 1.45
HLA-DQB2-230ENST00000427449 SETD5Q9C0A6 1442 aa24.09■■□□□ 1.45
HLA-DQB2-230ENST00000427449 FOXD1Q16676 465 aa24.08■■□□□ 1.45
HLA-DQB2-230ENST00000427449 SLC4A1APQ9BWU0 796 aaKnown RBP24.08■■□□□ 1.45
HLA-DQB2-230ENST00000427449 DISP3Q9P2K9 1392 aa24.06■■□□□ 1.44
HLA-DQB2-230ENST00000427449 HDGFP51858 240 aaKnown RBP24.06■■□□□ 1.44
HLA-DQB2-230ENST00000427449 ILDR2Q71H61 639 aa24.06■■□□□ 1.44
HLA-DQB2-230ENST00000427449 PROSER2Q86WR7 435 aaPredicted RBP24.06■■□□□ 1.44
HLA-DQB2-230ENST00000427449 TRIM52Q96A61 297 aa24.06■■□□□ 1.44
HLA-DQB2-230ENST00000427449 PHLPP1O60346 1717 aa24.06■■□□□ 1.44
HLA-DQB2-230ENST00000427449 SCAF1Q9H7N4 1312 aaKnown RBP24.06■■□□□ 1.44
HLA-DQB2-230ENST00000427449 RAB3GAP2Q9H2M9 1393 aa24.04■■□□□ 1.44
HLA-DQB2-230ENST00000427449 KNDC1Q76NI1 1749 aa24.04■■□□□ 1.44
HLA-DQB2-230ENST00000427449 AHDC1Q5TGY3 1603 aaPredicted RBP24.02■■□□□ 1.44
HLA-DQB2-230ENST00000427449 NHSL1Q5SYE7 1610 aa24.02■■□□□ 1.44
HLA-DQB2-230ENST00000427449 MSH6P52701 1360 aa24.02■■□□□ 1.44
HLA-DQB2-230ENST00000427449 MPHOSPH9Q99550 1183 aa24.01■■□□□ 1.43
HLA-DQB2-230ENST00000427449 DCCP43146 1447 aa24■■□□□ 1.43
HLA-DQB2-230ENST00000427449 PTCH1Q13635 1447 aa24■■□□□ 1.43
HLA-DQB2-230ENST00000427449 BCANQ96GW7 911 aa23.99■■□□□ 1.43
HLA-DQB2-230ENST00000427449 CCDC144AA2RUR9 1427 aa23.99■■□□□ 1.43
HLA-DQB2-230ENST00000427449 NRXN1Q9ULB1 1477 aa23.98■■□□□ 1.43
HLA-DQB2-230ENST00000427449 LAMC1P11047 1609 aa23.98■■□□□ 1.43
HLA-DQB2-230ENST00000427449 ZNF326Q5BKZ1 582 aaKnown RBP23.97■■□□□ 1.43
HLA-DQB2-230ENST00000427449 AMOTL2Q9Y2J4 779 aa23.97■■□□□ 1.43
HLA-DQB2-230ENST00000427449 ADGRL3Q9HAR2 1447 aa23.96■■□□□ 1.43
HLA-DQB2-230ENST00000427449 PIK3C2GO75747 1445 aa23.95■■□□□ 1.42
HLA-DQB2-230ENST00000427449 SHPRHQ149N8 1683 aa23.95■■□□□ 1.42
HLA-DQB2-230ENST00000427449 MST1RQ04912 1400 aa23.94■■□□□ 1.42
HLA-DQB2-230ENST00000427449 RPGRIP1LQ68CZ1 1315 aa23.94■■□□□ 1.42
HLA-DQB2-230ENST00000427449 ROBO2Q9HCK4 1378 aa23.91■■□□□ 1.42
HLA-DQB2-230ENST00000427449 MYOM2P54296 1465 aa23.91■■□□□ 1.42
HLA-DQB2-230ENST00000427449 ADGRF5Q8IZF2 1346 aa23.9■■□□□ 1.42
HLA-DQB2-230ENST00000427449 SLAIN2Q9P270 581 aa23.9■■□□□ 1.42
HLA-DQB2-230ENST00000427449 TECPR2O15040 1411 aa23.9■■□□□ 1.42
HLA-DQB2-230ENST00000427449 CDC42BPGQ6DT37 1551 aa23.88■■□□□ 1.41
HLA-DQB2-230ENST00000427449 ANKRD30BQ9BXX2 1392 aa23.88■■□□□ 1.41
HLA-DQB2-230ENST00000427449 C19orf44Q9H6X5 657 aa23.87■■□□□ 1.41
HLA-DQB2-230ENST00000427449 VGFO15240 615 aaPredicted RBP23.86■■□□□ 1.41
HLA-DQB2-230ENST00000427449 LRP6O75581 1613 aa23.84■■□□□ 1.41
HLA-DQB2-230ENST00000427449 ADGRB1O14514 1584 aa23.82■■□□□ 1.4
HLA-DQB2-230ENST00000427449 FMN2Q9NZ56 1722 aa23.82■■□□□ 1.4
HLA-DQB2-230ENST00000427449 ACIN1Q9UKV3 1341 aaKnown RBP23.82■■□□□ 1.4
HLA-DQB2-230ENST00000427449 CADPS2Q86UW7 1296 aa23.81■■□□□ 1.4
HLA-DQB2-230ENST00000427449 BRINP3Q76B58 766 aa23.8■■□□□ 1.4
HLA-DQB2-230ENST00000427449 RGS17Q9UGC6 210 aaPredicted RBP23.8■■□□□ 1.4
HLA-DQB2-230ENST00000427449 HRCP23327 699 aa23.78■■□□□ 1.4
HLA-DQB2-230ENST00000427449 C1orf167Q5SNV9 1468 aa23.78■■□□□ 1.4
HLA-DQB2-230ENST00000427449 RGPD8O14715 1765 aaPredicted RBP23.77■■□□□ 1.4
HLA-DQB2-230ENST00000427449 LRPPRCP42704 1394 aaKnown RBP23.77■■□□□ 1.4
HLA-DQB2-230ENST00000427449 RGL3Q3MIN7 710 aa23.76■■□□□ 1.39
HLA-DQB2-230ENST00000427449 JCADQ9P266 1359 aa23.74■■□□□ 1.39
HLA-DQB2-230ENST00000427449 PLEKHH1Q9ULM0 1364 aa23.74■■□□□ 1.39
HLA-DQB2-230ENST00000427449 YTHDC2Q9H6S0 1430 aaKnown RBP23.74■■□□□ 1.39
HLA-DQB2-230ENST00000427449 ATF3P18847 181 aa23.73■■□□□ 1.39
HLA-DQB2-230ENST00000427449 C14orf37Q86TY3 774 aa23.73■■□□□ 1.39
HLA-DQB2-230ENST00000427449 ABCC11Q96J66 1382 aa23.73■■□□□ 1.39
HLA-DQB2-230ENST00000427449 DLC1Q96QB1 1528 aa23.72■■□□□ 1.39
HLA-DQB2-230ENST00000427449 USP32Q8NFA0 1604 aa23.72■■□□□ 1.39
HLA-DQB2-230ENST00000427449 ARHGEF28Q8N1W1 1705 aaKnown RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms