RNA–Protein interactions for RNA: ENST00000427259.1

LINC00476-203, long intergenic non-protein coding RNA 476, humanhuman

TSL 2

Gene LINC00476, Length 893 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-203ENST00000427259 EID1Q9Y6B2 187 aa20.15■□□□□ 0.82
LINC00476-203ENST00000427259 NUP155O75694 1391 aa20.15■□□□□ 0.82
LINC00476-203ENST00000427259 PIP4K2BP78356 416 aa20.14■□□□□ 0.81
LINC00476-203ENST00000427259 SPHKAPQ2M3C7 1700 aa20.13■□□□□ 0.81
LINC00476-203ENST00000427259 SCAF1Q9H7N4 1312 aaKnown RBP20.12■□□□□ 0.81
LINC00476-203ENST00000427259 SLC26A8Q96RN1 970 aa20.12■□□□□ 0.81
LINC00476-203ENST00000427259 NAIPQ13075 1403 aa20.11■□□□□ 0.81
LINC00476-203ENST00000427259 DISP3Q9P2K9 1392 aa20.1■□□□□ 0.81
LINC00476-203ENST00000427259 HSPA1LP34931 641 aa20.1■□□□□ 0.81
LINC00476-203ENST00000427259 RIMS2Q9UQ26 1411 aa20.1■□□□□ 0.81
LINC00476-203ENST00000427259 NWD1Q149M9 1564 aa20.09■□□□□ 0.81
LINC00476-203ENST00000427259 TOM1O60784 492 aa20.09■□□□□ 0.81
LINC00476-203ENST00000427259 CHD2O14647 1828 aaKnown RBP20.07■□□□□ 0.8
LINC00476-203ENST00000427259 NUTM2DQ5VT03 806 aaPredicted RBP20.06■□□□□ 0.8
LINC00476-203ENST00000427259 ILDR2Q71H61 639 aa20.06■□□□□ 0.8
LINC00476-203ENST00000427259 RBM33Q96EV2 1170 aaKnown RBP20.06■□□□□ 0.8
LINC00476-203ENST00000427259 CHGAP10645 457 aaKnown RBP20.05■□□□□ 0.8
LINC00476-203ENST00000427259 PLEKHG1Q9ULL1 1385 aa20.05■□□□□ 0.8
LINC00476-203ENST00000427259 CLTCL1P53675 1640 aa20.05■□□□□ 0.8
LINC00476-203ENST00000427259 TMEM94Q12767 1356 aa20.03■□□□□ 0.8
LINC00476-203ENST00000427259 KCNA6P17658 529 aa20.02■□□□□ 0.8
LINC00476-203ENST00000427259 NRXN3Q9Y4C0 1643 aa20.02■□□□□ 0.79
LINC00476-203ENST00000427259 HFM1A2PYH4 1435 aa20.02■□□□□ 0.79
LINC00476-203ENST00000427259 ADAMTS13Q76LX8 1427 aa20.02■□□□□ 0.79
LINC00476-203ENST00000427259 NKTRP30414 1462 aaKnown RBP20■□□□□ 0.79
LINC00476-203ENST00000427259 MED1Q15648 1581 aaPredicted RBP20■□□□□ 0.79
LINC00476-203ENST00000427259 BCANQ96GW7 911 aa19.99■□□□□ 0.79
LINC00476-203ENST00000427259 TRPM2O94759 1503 aa19.98■□□□□ 0.79
LINC00476-203ENST00000427259 PPP1R15AO75807 674 aaPredicted RBP19.98■□□□□ 0.79
LINC00476-203ENST00000427259 KIF1BO60333 1816 aa19.95■□□□□ 0.78
LINC00476-203ENST00000427259 ROBO1Q9Y6N7 1651 aa19.95■□□□□ 0.78
LINC00476-203ENST00000427259 PROSER2Q86WR7 435 aaPredicted RBP19.95■□□□□ 0.78
LINC00476-203ENST00000427259 DIP2AQ14689 1571 aa19.95■□□□□ 0.78
LINC00476-203ENST00000427259 NEXMIFQ5QGS0 1516 aa19.94■□□□□ 0.78
LINC00476-203ENST00000427259 PTPRUQ92729 1446 aa19.93■□□□□ 0.78
LINC00476-203ENST00000427259 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.92■□□□□ 0.78
LINC00476-203ENST00000427259 TBX22Q9Y458 520 aa19.92■□□□□ 0.78
LINC00476-203ENST00000427259 SETBP1Q9Y6X0 1596 aa19.91■□□□□ 0.78
LINC00476-203ENST00000427259 XRN1Q8IZH2 1706 aaKnown RBP19.9■□□□□ 0.78
LINC00476-203ENST00000427259 HDGFP51858 240 aaKnown RBP19.9■□□□□ 0.78
LINC00476-203ENST00000427259 TRIM52Q96A61 297 aa19.89■□□□□ 0.77
LINC00476-203ENST00000427259 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.88■□□□□ 0.77
LINC00476-203ENST00000427259 SETD1AO15047 1707 aaKnown RBP19.88■□□□□ 0.77
LINC00476-203ENST00000427259 FAM135BQ49AJ0 1406 aa19.87■□□□□ 0.77
LINC00476-203ENST00000427259 ZNF326Q5BKZ1 582 aaKnown RBP19.86■□□□□ 0.77
LINC00476-203ENST00000427259 PPLO60437 1756 aa19.85■□□□□ 0.77
LINC00476-203ENST00000427259 METP08581 1390 aa19.84■□□□□ 0.77
LINC00476-203ENST00000427259 MSH6P52701 1360 aa19.84■□□□□ 0.77
LINC00476-203ENST00000427259 SLC4A1APQ9BWU0 796 aaKnown RBP19.84■□□□□ 0.77
LINC00476-203ENST00000427259 PIK3R4Q99570 1358 aa19.83■□□□□ 0.77
LINC00476-203ENST00000427259 AMOTL2Q9Y2J4 779 aa19.82■□□□□ 0.76
LINC00476-203ENST00000427259 PHLPP1O60346 1717 aa19.82■□□□□ 0.76
LINC00476-203ENST00000427259 MAPK8IP2Q13387 824 aaPredicted RBP19.79■□□□□ 0.76
LINC00476-203ENST00000427259 SLAIN2Q9P270 581 aa19.79■□□□□ 0.76
LINC00476-203ENST00000427259 NALCNQ8IZF0 1738 aa19.79■□□□□ 0.76
LINC00476-203ENST00000427259 NCOA3Q9Y6Q9 1424 aa19.78■□□□□ 0.76
LINC00476-203ENST00000427259 COL16A1Q07092 1604 aaPredicted RBP19.77■□□□□ 0.76
LINC00476-203ENST00000427259 IFT172Q9UG01 1749 aa19.77■□□□□ 0.76
LINC00476-203ENST00000427259 SOCS7O14512 581 aa19.77■□□□□ 0.76
LINC00476-203ENST00000427259 C14orf37Q86TY3 774 aa19.75■□□□□ 0.75
LINC00476-203ENST00000427259 MPHOSPH9Q99550 1183 aa19.74■□□□□ 0.75
LINC00476-203ENST00000427259 SPATA31E1Q6ZUB1 1445 aa19.72■□□□□ 0.75
LINC00476-203ENST00000427259 C19orf44Q9H6X5 657 aa19.72■□□□□ 0.75
LINC00476-203ENST00000427259 RGS17Q9UGC6 210 aaPredicted RBP19.71■□□□□ 0.75
LINC00476-203ENST00000427259 SETD5Q9C0A6 1442 aa19.7■□□□□ 0.74
LINC00476-203ENST00000427259 AHDC1Q5TGY3 1603 aaPredicted RBP19.7■□□□□ 0.74
LINC00476-203ENST00000427259 CCDC144AA2RUR9 1427 aa19.69■□□□□ 0.74
LINC00476-203ENST00000427259 MST1RQ04912 1400 aa19.69■□□□□ 0.74
LINC00476-203ENST00000427259 CADPS2Q86UW7 1296 aa19.68■□□□□ 0.74
LINC00476-203ENST00000427259 RAB3GAP2Q9H2M9 1393 aa19.68■□□□□ 0.74
LINC00476-203ENST00000427259 ROBO2Q9HCK4 1378 aa19.68■□□□□ 0.74
LINC00476-203ENST00000427259 DCCP43146 1447 aa19.68■□□□□ 0.74
LINC00476-203ENST00000427259 ADGRL3Q9HAR2 1447 aa19.68■□□□□ 0.74
LINC00476-203ENST00000427259 ASXL1Q8IXJ9 1541 aa19.67■□□□□ 0.74
LINC00476-203ENST00000427259 VGFO15240 615 aaPredicted RBP19.67■□□□□ 0.74
LINC00476-203ENST00000427259 ATF3P18847 181 aa19.67■□□□□ 0.74
LINC00476-203ENST00000427259 RPGRIP1LQ68CZ1 1315 aa19.67■□□□□ 0.74
LINC00476-203ENST00000427259 ADGRF5Q8IZF2 1346 aa19.67■□□□□ 0.74
LINC00476-203ENST00000427259 NHSL1Q5SYE7 1610 aa19.66■□□□□ 0.74
LINC00476-203ENST00000427259 RGL3Q3MIN7 710 aa19.65■□□□□ 0.74
LINC00476-203ENST00000427259 BRINP3Q76B58 766 aa19.65■□□□□ 0.74
LINC00476-203ENST00000427259 PTCH1Q13635 1447 aa19.65■□□□□ 0.74
LINC00476-203ENST00000427259 LRP6O75581 1613 aa19.65■□□□□ 0.74
LINC00476-203ENST00000427259 PRAG1Q86YV5 1406 aa19.64■□□□□ 0.73
LINC00476-203ENST00000427259 SHPRHQ149N8 1683 aa19.64■□□□□ 0.73
LINC00476-203ENST00000427259 JCADQ9P266 1359 aa19.62■□□□□ 0.73
LINC00476-203ENST00000427259 DDX17Q92841 729 aaKnown RBP19.6■□□□□ 0.73
LINC00476-203ENST00000427259 PIK3C2GO75747 1445 aa19.59■□□□□ 0.73
LINC00476-203ENST00000427259 KNDC1Q76NI1 1749 aa19.59■□□□□ 0.73
LINC00476-203ENST00000427259 POTEAQ6S8J7 498 aa19.58■□□□□ 0.72
LINC00476-203ENST00000427259 C1orf167Q5SNV9 1468 aa19.57■□□□□ 0.72
LINC00476-203ENST00000427259 ANKRD30BQ9BXX2 1392 aa19.57■□□□□ 0.72
LINC00476-203ENST00000427259 LAMC1P11047 1609 aa19.55■□□□□ 0.72
LINC00476-203ENST00000427259 TMEM132EQ6IEE7 984 aa19.55■□□□□ 0.72
LINC00476-203ENST00000427259 NRXN1Q9ULB1 1477 aa19.54■□□□□ 0.72
LINC00476-203ENST00000427259 PLEKHH1Q9ULM0 1364 aa19.54■□□□□ 0.72
LINC00476-203ENST00000427259 CDC42BPGQ6DT37 1551 aa19.53■□□□□ 0.72
LINC00476-203ENST00000427259 TECPR2O15040 1411 aa19.53■□□□□ 0.72
LINC00476-203ENST00000427259 ORAI2Q96SN7 254 aa19.52■□□□□ 0.72
LINC00476-203ENST00000427259 STK26Q9P289 416 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms