RNA–Protein interactions for RNA: ENST00000427167.5

SEMA3C-204, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-204ENST00000427167 SCAF1Q9H7N4 1312 aaKnown RBP34.3■■■■□ 3.08
SEMA3C-204ENST00000427167 PPP1R15AO75807 674 aaPredicted RBP34.29■■■■□ 3.08
SEMA3C-204ENST00000427167 SPHKAPQ2M3C7 1700 aa34.27■■■■□ 3.08
SEMA3C-204ENST00000427167 PIP4K2BP78356 416 aa34.27■■■■□ 3.08
SEMA3C-204ENST00000427167 TRIM52Q96A61 297 aa34.27■■■■□ 3.08
SEMA3C-204ENST00000427167 TOM1O60784 492 aa34.26■■■■□ 3.08
SEMA3C-204ENST00000427167 HDGFP51858 240 aaKnown RBP34.24■■■■□ 3.07
SEMA3C-204ENST00000427167 NUTM2DQ5VT03 806 aaPredicted RBP34.23■■■■□ 3.07
SEMA3C-204ENST00000427167 PLEKHG1Q9ULL1 1385 aa34.21■■■■□ 3.07
SEMA3C-204ENST00000427167 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.19■■■■□ 3.06
SEMA3C-204ENST00000427167 KCNA6P17658 529 aa34.16■■■■□ 3.06
SEMA3C-204ENST00000427167 ALKQ9UM73 1620 aa34.14■■■■□ 3.06
SEMA3C-204ENST00000427167 CLTCL1P53675 1640 aa34.12■■■■□ 3.05
SEMA3C-204ENST00000427167 XIRP1Q702N8 1843 aaKnown RBP34.12■■■■□ 3.05
SEMA3C-204ENST00000427167 SLC4A1APQ9BWU0 796 aaKnown RBP34.12■■■■□ 3.05
SEMA3C-204ENST00000427167 TRPM2O94759 1503 aa34.12■■■■□ 3.05
SEMA3C-204ENST00000427167 ZNF326Q5BKZ1 582 aaKnown RBP34.1■■■■□ 3.05
SEMA3C-204ENST00000427167 TMEM94Q12767 1356 aa34.09■■■■□ 3.05
SEMA3C-204ENST00000427167 NWD1Q149M9 1564 aa34.08■■■■□ 3.05
SEMA3C-204ENST00000427167 PROSER2Q86WR7 435 aaPredicted RBP34.08■■■■□ 3.05
SEMA3C-204ENST00000427167 RBM33Q96EV2 1170 aaKnown RBP34.07■■■■□ 3.04
SEMA3C-204ENST00000427167 HSPA1LP34931 641 aa34.06■■■■□ 3.04
SEMA3C-204ENST00000427167 NKTRP30414 1462 aaKnown RBP34.05■■■■□ 3.04
SEMA3C-204ENST00000427167 TBX22Q9Y458 520 aa34.04■■■■□ 3.04
SEMA3C-204ENST00000427167 ADAMTS13Q76LX8 1427 aa34.04■■■■□ 3.04
SEMA3C-204ENST00000427167 CHD2O14647 1828 aaKnown RBP34.02■■■■□ 3.04
SEMA3C-204ENST00000427167 DIP2AQ14689 1571 aa34.01■■■■□ 3.03
SEMA3C-204ENST00000427167 KIF1BO60333 1816 aa34■■■■□ 3.03
SEMA3C-204ENST00000427167 DISP3Q9P2K9 1392 aa33.99■■■■□ 3.03
SEMA3C-204ENST00000427167 FOXD1Q16676 465 aa33.99■■■■□ 3.03
SEMA3C-204ENST00000427167 NEXMIFQ5QGS0 1516 aa33.94■■■■□ 3.02
SEMA3C-204ENST00000427167 SETD5Q9C0A6 1442 aa33.92■■■■□ 3.02
SEMA3C-204ENST00000427167 NRXN3Q9Y4C0 1643 aa33.92■■■■□ 3.02
SEMA3C-204ENST00000427167 MPHOSPH9Q99550 1183 aa33.91■■■■□ 3.02
SEMA3C-204ENST00000427167 SETBP1Q9Y6X0 1596 aa33.9■■■■□ 3.02
SEMA3C-204ENST00000427167 PIK3R4Q99570 1358 aa33.9■■■■□ 3.02
SEMA3C-204ENST00000427167 MSH6P52701 1360 aa33.89■■■■□ 3.02
SEMA3C-204ENST00000427167 AMOTL2Q9Y2J4 779 aa33.86■■■■□ 3.01
SEMA3C-204ENST00000427167 PTPRUQ92729 1446 aa33.86■■■■□ 3.01
SEMA3C-204ENST00000427167 C14orf37Q86TY3 774 aa33.85■■■■□ 3.01
SEMA3C-204ENST00000427167 CCDC144AA2RUR9 1427 aa33.82■■■■□ 3
SEMA3C-204ENST00000427167 RAB3GAP2Q9H2M9 1393 aa33.81■■■■□ 3
SEMA3C-204ENST00000427167 METP08581 1390 aa33.8■■■■□ 3
SEMA3C-204ENST00000427167 FAM135BQ49AJ0 1406 aa33.79■■■■□ 3
SEMA3C-204ENST00000427167 VGFO15240 615 aaPredicted RBP33.78■■■■□ 3
SEMA3C-204ENST00000427167 ACIN1Q9UKV3 1341 aaKnown RBP33.78■■■■□ 3
SEMA3C-204ENST00000427167 ROBO1Q9Y6N7 1651 aa33.77■■■■□ 3
SEMA3C-204ENST00000427167 NCOA3Q9Y6Q9 1424 aa33.77■■■■□ 3
SEMA3C-204ENST00000427167 RPGRIP1LQ68CZ1 1315 aa33.77■■■■□ 3
SEMA3C-204ENST00000427167 XRN1Q8IZH2 1706 aaKnown RBP33.76■■■■□ 3
SEMA3C-204ENST00000427167 PPLO60437 1756 aa33.75■■■□□ 2.99
SEMA3C-204ENST00000427167 SLAIN2Q9P270 581 aa33.74■■■□□ 2.99
SEMA3C-204ENST00000427167 MED1Q15648 1581 aaPredicted RBP33.72■■■□□ 2.99
SEMA3C-204ENST00000427167 RGL3Q3MIN7 710 aa33.72■■■□□ 2.99
SEMA3C-204ENST00000427167 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.7■■■□□ 2.99
SEMA3C-204ENST00000427167 C19orf44Q9H6X5 657 aa33.7■■■□□ 2.99
SEMA3C-204ENST00000427167 ILDR2Q71H61 639 aa33.69■■■□□ 2.98
SEMA3C-204ENST00000427167 ATF3P18847 181 aa33.68■■■□□ 2.98
SEMA3C-204ENST00000427167 SPATA31E1Q6ZUB1 1445 aa33.67■■■□□ 2.98
SEMA3C-204ENST00000427167 SETD1AO15047 1707 aaKnown RBP33.65■■■□□ 2.98
SEMA3C-204ENST00000427167 CADPS2Q86UW7 1296 aa33.65■■■□□ 2.98
SEMA3C-204ENST00000427167 ADGRF5Q8IZF2 1346 aa33.61■■■□□ 2.97
SEMA3C-204ENST00000427167 IFT172Q9UG01 1749 aa33.59■■■□□ 2.97
SEMA3C-204ENST00000427167 ANKRD30BQ9BXX2 1392 aa33.58■■■□□ 2.97
SEMA3C-204ENST00000427167 PHLPP1O60346 1717 aa33.57■■■□□ 2.96
SEMA3C-204ENST00000427167 DCCP43146 1447 aa33.56■■■□□ 2.96
SEMA3C-204ENST00000427167 PHF23Q9BUL5 403 aaPredicted RBP33.55■■■□□ 2.96
SEMA3C-204ENST00000427167 ADGRL3Q9HAR2 1447 aa33.54■■■□□ 2.96
SEMA3C-204ENST00000427167 PTCH1Q13635 1447 aa33.53■■■□□ 2.96
SEMA3C-204ENST00000427167 NALCNQ8IZF0 1738 aa33.53■■■□□ 2.96
SEMA3C-204ENST00000427167 ROBO2Q9HCK4 1378 aa33.53■■■□□ 2.96
SEMA3C-204ENST00000427167 HRCP23327 699 aa33.48■■■□□ 2.95
SEMA3C-204ENST00000427167 PIK3C2GO75747 1445 aa33.47■■■□□ 2.95
SEMA3C-204ENST00000427167 MST1RQ04912 1400 aa33.47■■■□□ 2.95
SEMA3C-204ENST00000427167 BRINP3Q76B58 766 aa33.47■■■□□ 2.95
SEMA3C-204ENST00000427167 COL16A1Q07092 1604 aaPredicted RBP33.45■■■□□ 2.95
SEMA3C-204ENST00000427167 PRAG1Q86YV5 1406 aa33.45■■■□□ 2.94
SEMA3C-204ENST00000427167 STK26Q9P289 416 aa33.44■■■□□ 2.94
SEMA3C-204ENST00000427167 AHDC1Q5TGY3 1603 aaPredicted RBP33.42■■■□□ 2.94
SEMA3C-204ENST00000427167 TMEM132EQ6IEE7 984 aa33.42■■■□□ 2.94
SEMA3C-204ENST00000427167 ASXL1Q8IXJ9 1541 aa33.42■■■□□ 2.94
SEMA3C-204ENST00000427167 JCADQ9P266 1359 aa33.41■■■□□ 2.94
SEMA3C-204ENST00000427167 MYOM2P54296 1465 aa33.38■■■□□ 2.93
SEMA3C-204ENST00000427167 LRPPRCP42704 1394 aaKnown RBP33.36■■■□□ 2.93
SEMA3C-204ENST00000427167 NRXN1Q9ULB1 1477 aa33.35■■■□□ 2.93
SEMA3C-204ENST00000427167 SOCS7O14512 581 aa33.34■■■□□ 2.93
SEMA3C-204ENST00000427167 C1orf167Q5SNV9 1468 aa33.33■■■□□ 2.93
SEMA3C-204ENST00000427167 CFAP70Q5T0N1 1121 aa33.33■■■□□ 2.93
SEMA3C-204ENST00000427167 TECPR2O15040 1411 aa33.33■■■□□ 2.93
SEMA3C-204ENST00000427167 WAPLQ7Z5K2 1190 aa33.32■■■□□ 2.92
SEMA3C-204ENST00000427167 C14orf93Q9H972 538 aaKnown RBP33.32■■■□□ 2.92
SEMA3C-204ENST00000427167 YTHDC2Q9H6S0 1430 aaKnown RBP33.31■■■□□ 2.92
SEMA3C-204ENST00000427167 ABCC11Q96J66 1382 aa33.31■■■□□ 2.92
SEMA3C-204ENST00000427167 LAMC1P11047 1609 aa33.31■■■□□ 2.92
SEMA3C-204ENST00000427167 KNDC1Q76NI1 1749 aa33.31■■■□□ 2.92
SEMA3C-204ENST00000427167 DDX17Q92841 729 aaKnown RBP33.3■■■□□ 2.92
SEMA3C-204ENST00000427167 NHSL1Q5SYE7 1610 aa33.3■■■□□ 2.92
SEMA3C-204ENST00000427167 KDM2AQ9Y2K7 1162 aa33.29■■■□□ 2.92
SEMA3C-204ENST00000427167 PLEKHH1Q9ULM0 1364 aa33.27■■■□□ 2.92
SEMA3C-204ENST00000427167 DCAF11Q8TEB1 546 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms