RNA–Protein interactions for RNA: ENST00000427118.1

AFF3-208, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-208ENST00000427118 RIMS2Q9UQ26 1411 aa23.76■■□□□ 1.39
AFF3-208ENST00000427118 TRIM52Q96A61 297 aa23.75■■□□□ 1.39
AFF3-208ENST00000427118 UBAP1LF5GYI3 381 aa23.74■■□□□ 1.39
AFF3-208ENST00000427118 SLC26A8Q96RN1 970 aa23.74■■□□□ 1.39
AFF3-208ENST00000427118 NUTM2DQ5VT03 806 aaPredicted RBP23.73■■□□□ 1.39
AFF3-208ENST00000427118 LRRC7Q96NW7 1537 aa23.73■■□□□ 1.39
AFF3-208ENST00000427118 CLTCL1P53675 1640 aa23.72■■□□□ 1.39
AFF3-208ENST00000427118 SETD5Q9C0A6 1442 aa23.7■■□□□ 1.38
AFF3-208ENST00000427118 XIRP1Q702N8 1843 aaKnown RBP23.7■■□□□ 1.38
AFF3-208ENST00000427118 ACIN1Q9UKV3 1341 aaKnown RBP23.69■■□□□ 1.38
AFF3-208ENST00000427118 ALKQ9UM73 1620 aa23.69■■□□□ 1.38
AFF3-208ENST00000427118 TRPM2O94759 1503 aa23.69■■□□□ 1.38
AFF3-208ENST00000427118 PLEKHG1Q9ULL1 1385 aa23.67■■□□□ 1.38
AFF3-208ENST00000427118 PPP1R15AO75807 674 aaPredicted RBP23.67■■□□□ 1.38
AFF3-208ENST00000427118 CCER1Q8TC90 406 aaPredicted RBP23.67■■□□□ 1.38
AFF3-208ENST00000427118 BCANQ96GW7 911 aa23.67■■□□□ 1.38
AFF3-208ENST00000427118 SLC4A1APQ9BWU0 796 aaKnown RBP23.66■■□□□ 1.38
AFF3-208ENST00000427118 FOXD1Q16676 465 aa23.64■■□□□ 1.37
AFF3-208ENST00000427118 NWD1Q149M9 1564 aa23.61■■□□□ 1.37
AFF3-208ENST00000427118 KIF1BO60333 1816 aa23.61■■□□□ 1.37
AFF3-208ENST00000427118 ADAMTS13Q76LX8 1427 aa23.61■■□□□ 1.37
AFF3-208ENST00000427118 KCNA6P17658 529 aa23.61■■□□□ 1.37
AFF3-208ENST00000427118 PIP4K2BP78356 416 aa23.61■■□□□ 1.37
AFF3-208ENST00000427118 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.61■■□□□ 1.37
AFF3-208ENST00000427118 HDGFP51858 240 aaKnown RBP23.6■■□□□ 1.37
AFF3-208ENST00000427118 RBM33Q96EV2 1170 aaKnown RBP23.6■■□□□ 1.37
AFF3-208ENST00000427118 CHD2O14647 1828 aaKnown RBP23.6■■□□□ 1.37
AFF3-208ENST00000427118 RAB3GAP2Q9H2M9 1393 aa23.6■■□□□ 1.37
AFF3-208ENST00000427118 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
AFF3-208ENST00000427118 TOM1O60784 492 aa23.58■■□□□ 1.37
AFF3-208ENST00000427118 ZNF326Q5BKZ1 582 aaKnown RBP23.58■■□□□ 1.37
AFF3-208ENST00000427118 NRXN3Q9Y4C0 1643 aa23.58■■□□□ 1.36
AFF3-208ENST00000427118 NEXMIFQ5QGS0 1516 aa23.57■■□□□ 1.36
AFF3-208ENST00000427118 TMEM94Q12767 1356 aa23.56■■□□□ 1.36
AFF3-208ENST00000427118 MPHOSPH9Q99550 1183 aa23.55■■□□□ 1.36
AFF3-208ENST00000427118 TBX22Q9Y458 520 aa23.55■■□□□ 1.36
AFF3-208ENST00000427118 DIP2AQ14689 1571 aa23.53■■□□□ 1.36
AFF3-208ENST00000427118 PROSER2Q86WR7 435 aaPredicted RBP23.53■■□□□ 1.36
AFF3-208ENST00000427118 NKTRP30414 1462 aaKnown RBP23.53■■□□□ 1.36
AFF3-208ENST00000427118 SETBP1Q9Y6X0 1596 aa23.51■■□□□ 1.35
AFF3-208ENST00000427118 PTPRUQ92729 1446 aa23.5■■□□□ 1.35
AFF3-208ENST00000427118 HSPA1LP34931 641 aa23.5■■□□□ 1.35
AFF3-208ENST00000427118 PPLO60437 1756 aa23.46■■□□□ 1.35
AFF3-208ENST00000427118 METP08581 1390 aa23.44■■□□□ 1.34
AFF3-208ENST00000427118 PIK3R4Q99570 1358 aa23.44■■□□□ 1.34
AFF3-208ENST00000427118 CCDC144AA2RUR9 1427 aa23.43■■□□□ 1.34
AFF3-208ENST00000427118 XRN1Q8IZH2 1706 aaKnown RBP23.42■■□□□ 1.34
AFF3-208ENST00000427118 AMOTL2Q9Y2J4 779 aa23.42■■□□□ 1.34
AFF3-208ENST00000427118 SETD1AO15047 1707 aaKnown RBP23.42■■□□□ 1.34
AFF3-208ENST00000427118 CLSPNQ9HAW4 1339 aa23.41■■□□□ 1.34
AFF3-208ENST00000427118 SPATA31E1Q6ZUB1 1445 aa23.41■■□□□ 1.34
AFF3-208ENST00000427118 RGL3Q3MIN7 710 aa23.39■■□□□ 1.33
AFF3-208ENST00000427118 MSH6P52701 1360 aa23.39■■□□□ 1.33
AFF3-208ENST00000427118 IFT172Q9UG01 1749 aa23.38■■□□□ 1.33
AFF3-208ENST00000427118 RPGRIP1LQ68CZ1 1315 aa23.37■■□□□ 1.33
AFF3-208ENST00000427118 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.36■■□□□ 1.33
AFF3-208ENST00000427118 ROBO1Q9Y6N7 1651 aa23.36■■□□□ 1.33
AFF3-208ENST00000427118 VGFO15240 615 aaPredicted RBP23.36■■□□□ 1.33
AFF3-208ENST00000427118 DISP3Q9P2K9 1392 aa23.35■■□□□ 1.33
AFF3-208ENST00000427118 ADGRF5Q8IZF2 1346 aa23.34■■□□□ 1.33
AFF3-208ENST00000427118 FAM135BQ49AJ0 1406 aa23.33■■□□□ 1.33
AFF3-208ENST00000427118 C14orf37Q86TY3 774 aa23.33■■□□□ 1.33
AFF3-208ENST00000427118 NCOA3Q9Y6Q9 1424 aa23.33■■□□□ 1.32
AFF3-208ENST00000427118 SLAIN2Q9P270 581 aa23.29■■□□□ 1.32
AFF3-208ENST00000427118 ANKRD30BQ9BXX2 1392 aa23.28■■□□□ 1.32
AFF3-208ENST00000427118 MED1Q15648 1581 aaPredicted RBP23.28■■□□□ 1.32
AFF3-208ENST00000427118 C19orf44Q9H6X5 657 aa23.27■■□□□ 1.32
AFF3-208ENST00000427118 NALCNQ8IZF0 1738 aa23.27■■□□□ 1.32
AFF3-208ENST00000427118 DHX57Q6P158 1386 aaKnown RBP23.26■■□□□ 1.31
AFF3-208ENST00000427118 ROBO2Q9HCK4 1378 aa23.25■■□□□ 1.31
AFF3-208ENST00000427118 ASXL1Q8IXJ9 1541 aa23.24■■□□□ 1.31
AFF3-208ENST00000427118 ATF3P18847 181 aa23.23■■□□□ 1.31
AFF3-208ENST00000427118 ILDR2Q71H61 639 aa23.23■■□□□ 1.31
AFF3-208ENST00000427118 CADPS2Q86UW7 1296 aa23.22■■□□□ 1.31
AFF3-208ENST00000427118 PIK3C2GO75747 1445 aa23.22■■□□□ 1.31
AFF3-208ENST00000427118 PTCH1Q13635 1447 aa23.22■■□□□ 1.31
AFF3-208ENST00000427118 PHLPP1O60346 1717 aa23.22■■□□□ 1.31
AFF3-208ENST00000427118 ADGRL3Q9HAR2 1447 aa23.21■■□□□ 1.31
AFF3-208ENST00000427118 DCCP43146 1447 aa23.19■■□□□ 1.3
AFF3-208ENST00000427118 PRAG1Q86YV5 1406 aa23.19■■□□□ 1.3
AFF3-208ENST00000427118 TMEM132EQ6IEE7 984 aa23.19■■□□□ 1.3
AFF3-208ENST00000427118 NRXN1Q9ULB1 1477 aa23.17■■□□□ 1.3
AFF3-208ENST00000427118 MST1RQ04912 1400 aa23.17■■□□□ 1.3
AFF3-208ENST00000427118 STK26Q9P289 416 aa23.17■■□□□ 1.3
AFF3-208ENST00000427118 MYOM2P54296 1465 aa23.17■■□□□ 1.3
AFF3-208ENST00000427118 COL16A1Q07092 1604 aaPredicted RBP23.15■■□□□ 1.3
AFF3-208ENST00000427118 BRINP3Q76B58 766 aa23.14■■□□□ 1.29
AFF3-208ENST00000427118 AHDC1Q5TGY3 1603 aaPredicted RBP23.13■■□□□ 1.29
AFF3-208ENST00000427118 CFAP70Q5T0N1 1121 aa23.13■■□□□ 1.29
AFF3-208ENST00000427118 KNDC1Q76NI1 1749 aa23.13■■□□□ 1.29
AFF3-208ENST00000427118 LRPPRCP42704 1394 aaKnown RBP23.13■■□□□ 1.29
AFF3-208ENST00000427118 TECPR2O15040 1411 aa23.11■■□□□ 1.29
AFF3-208ENST00000427118 WAPLQ7Z5K2 1190 aa23.11■■□□□ 1.29
AFF3-208ENST00000427118 C14orf93Q9H972 538 aaKnown RBP23.11■■□□□ 1.29
AFF3-208ENST00000427118 PLEKHH1Q9ULM0 1364 aa23.11■■□□□ 1.29
AFF3-208ENST00000427118 YTHDC2Q9H6S0 1430 aaKnown RBP23.1■■□□□ 1.29
AFF3-208ENST00000427118 KDM2AQ9Y2K7 1162 aa23.1■■□□□ 1.29
AFF3-208ENST00000427118 LAMC1P11047 1609 aa23.09■■□□□ 1.29
AFF3-208ENST00000427118 DDX17Q92841 729 aaKnown RBP23.08■■□□□ 1.29
AFF3-208ENST00000427118 ABCC11Q96J66 1382 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms