RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 CPS1P31327 1500 aa25.67■■□□□ 1.7
LMCD1-204ENST00000426878 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.67■■□□□ 1.7
LMCD1-204ENST00000426878 MPHOSPH9Q99550 1183 aa25.67■■□□□ 1.7
LMCD1-204ENST00000426878 RAB3GAP2Q9H2M9 1393 aa25.66■■□□□ 1.7
LMCD1-204ENST00000426878 CLTCL1P53675 1640 aa25.64■■□□□ 1.7
LMCD1-204ENST00000426878 PLEKHG1Q9ULL1 1385 aa25.64■■□□□ 1.69
LMCD1-204ENST00000426878 HRCP23327 699 aa25.63■■□□□ 1.69
LMCD1-204ENST00000426878 PPP1R15AO75807 674 aaPredicted RBP25.6■■□□□ 1.69
LMCD1-204ENST00000426878 STRCP1A6NGW2 1772 aa25.58■■□□□ 1.69
LMCD1-204ENST00000426878 KIF1BO60333 1816 aa25.58■■□□□ 1.69
LMCD1-204ENST00000426878 FOXD1Q16676 465 aa25.57■■□□□ 1.68
LMCD1-204ENST00000426878 SLC26A8Q96RN1 970 aa25.57■■□□□ 1.68
LMCD1-204ENST00000426878 ZNF326Q5BKZ1 582 aaKnown RBP25.54■■□□□ 1.68
LMCD1-204ENST00000426878 BCANQ96GW7 911 aa25.54■■□□□ 1.68
LMCD1-204ENST00000426878 TBX22Q9Y458 520 aa25.54■■□□□ 1.68
LMCD1-204ENST00000426878 LRRC7Q96NW7 1537 aa25.52■■□□□ 1.68
LMCD1-204ENST00000426878 KCNA6P17658 529 aa25.52■■□□□ 1.68
LMCD1-204ENST00000426878 NUTM2DQ5VT03 806 aaPredicted RBP25.52■■□□□ 1.68
LMCD1-204ENST00000426878 CCDC144AA2RUR9 1427 aa25.51■■□□□ 1.67
LMCD1-204ENST00000426878 NEXMIFQ5QGS0 1516 aa25.51■■□□□ 1.67
LMCD1-204ENST00000426878 ADAMTS13Q76LX8 1427 aa25.51■■□□□ 1.67
LMCD1-204ENST00000426878 DIP2AQ14689 1571 aa25.5■■□□□ 1.67
LMCD1-204ENST00000426878 RPGRIP1LQ68CZ1 1315 aa25.48■■□□□ 1.67
LMCD1-204ENST00000426878 NWD1Q149M9 1564 aa25.47■■□□□ 1.67
LMCD1-204ENST00000426878 PIK3R4Q99570 1358 aa25.46■■□□□ 1.67
LMCD1-204ENST00000426878 SETBP1Q9Y6X0 1596 aa25.46■■□□□ 1.67
LMCD1-204ENST00000426878 CHD2O14647 1828 aaKnown RBP25.45■■□□□ 1.66
LMCD1-204ENST00000426878 UBAP1LF5GYI3 381 aa25.45■■□□□ 1.66
LMCD1-204ENST00000426878 SPATA31E1Q6ZUB1 1445 aa25.44■■□□□ 1.66
LMCD1-204ENST00000426878 NKTRP30414 1462 aaKnown RBP25.44■■□□□ 1.66
LMCD1-204ENST00000426878 VGFO15240 615 aaPredicted RBP25.44■■□□□ 1.66
LMCD1-204ENST00000426878 SENP3Q9H4L4 574 aaPredicted RBP25.44■■□□□ 1.66
LMCD1-204ENST00000426878 NRXN3Q9Y4C0 1643 aa25.43■■□□□ 1.66
LMCD1-204ENST00000426878 TOM1O60784 492 aa25.4■■□□□ 1.66
LMCD1-204ENST00000426878 ANKRD30BQ9BXX2 1392 aa25.4■■□□□ 1.66
LMCD1-204ENST00000426878 XIRP1Q702N8 1843 aaKnown RBP25.39■■□□□ 1.66
LMCD1-204ENST00000426878 PPLO60437 1756 aa25.39■■□□□ 1.65
LMCD1-204ENST00000426878 PROSER2Q86WR7 435 aaPredicted RBP25.37■■□□□ 1.65
LMCD1-204ENST00000426878 TMEM94Q12767 1356 aa25.37■■□□□ 1.65
LMCD1-204ENST00000426878 RGL3Q3MIN7 710 aa25.34■■□□□ 1.65
LMCD1-204ENST00000426878 ALKQ9UM73 1620 aa25.34■■□□□ 1.65
LMCD1-204ENST00000426878 PTPRUQ92729 1446 aa25.33■■□□□ 1.65
LMCD1-204ENST00000426878 NCOA3Q9Y6Q9 1424 aa25.32■■□□□ 1.64
LMCD1-204ENST00000426878 METP08581 1390 aa25.32■■□□□ 1.64
LMCD1-204ENST00000426878 IFT172Q9UG01 1749 aa25.32■■□□□ 1.64
LMCD1-204ENST00000426878 AMOTL2Q9Y2J4 779 aa25.31■■□□□ 1.64
LMCD1-204ENST00000426878 XRN1Q8IZH2 1706 aaKnown RBP25.28■■□□□ 1.64
LMCD1-204ENST00000426878 ADGRF5Q8IZF2 1346 aa25.28■■□□□ 1.64
LMCD1-204ENST00000426878 SETD1AO15047 1707 aaKnown RBP25.28■■□□□ 1.64
LMCD1-204ENST00000426878 TRIM26Q12899 539 aaPredicted RBP25.27■■□□□ 1.64
LMCD1-204ENST00000426878 RBM33Q96EV2 1170 aaKnown RBP25.27■■□□□ 1.64
LMCD1-204ENST00000426878 PIP4K2BP78356 416 aa25.26■■□□□ 1.63
LMCD1-204ENST00000426878 MSH6P52701 1360 aa25.25■■□□□ 1.63
LMCD1-204ENST00000426878 SCAF1Q9H7N4 1312 aaKnown RBP25.22■■□□□ 1.63
LMCD1-204ENST00000426878 PIK3C2GO75747 1445 aa25.22■■□□□ 1.63
LMCD1-204ENST00000426878 PRAG1Q86YV5 1406 aa25.22■■□□□ 1.63
LMCD1-204ENST00000426878 MYOM2P54296 1465 aa25.21■■□□□ 1.63
LMCD1-204ENST00000426878 NRXN1Q9ULB1 1477 aa25.21■■□□□ 1.63
LMCD1-204ENST00000426878 C19orf44Q9H6X5 657 aa25.2■■□□□ 1.62
LMCD1-204ENST00000426878 STAC3Q96MF2 364 aa25.18■■□□□ 1.62
LMCD1-204ENST00000426878 PTCH1Q13635 1447 aa25.17■■□□□ 1.62
LMCD1-204ENST00000426878 FAM135BQ49AJ0 1406 aa25.17■■□□□ 1.62
LMCD1-204ENST00000426878 C14orf37Q86TY3 774 aa25.16■■□□□ 1.62
LMCD1-204ENST00000426878 HSPA1LP34931 641 aa25.14■■□□□ 1.62
LMCD1-204ENST00000426878 C14orf93Q9H972 538 aaKnown RBP25.14■■□□□ 1.62
LMCD1-204ENST00000426878 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.14■■□□□ 1.61
LMCD1-204ENST00000426878 CADPS2Q86UW7 1296 aa25.13■■□□□ 1.61
LMCD1-204ENST00000426878 SLAIN2Q9P270 581 aa25.13■■□□□ 1.61
LMCD1-204ENST00000426878 DCCP43146 1447 aa25.13■■□□□ 1.61
LMCD1-204ENST00000426878 DHX57Q6P158 1386 aaKnown RBP25.11■■□□□ 1.61
LMCD1-204ENST00000426878 ROBO2Q9HCK4 1378 aa25.11■■□□□ 1.61
LMCD1-204ENST00000426878 ATF3P18847 181 aa25.11■■□□□ 1.61
LMCD1-204ENST00000426878 DCAF11Q8TEB1 546 aa25.11■■□□□ 1.61
LMCD1-204ENST00000426878 ASXL1Q8IXJ9 1541 aa25.1■■□□□ 1.61
LMCD1-204ENST00000426878 LAMC1P11047 1609 aa25.1■■□□□ 1.61
LMCD1-204ENST00000426878 TECPR2O15040 1411 aa25.1■■□□□ 1.61
LMCD1-204ENST00000426878 LRPPRCP42704 1394 aaKnown RBP25.1■■□□□ 1.61
LMCD1-204ENST00000426878 ADGRL3Q9HAR2 1447 aa25.09■■□□□ 1.61
LMCD1-204ENST00000426878 ABCC11Q96J66 1382 aa25.09■■□□□ 1.61
LMCD1-204ENST00000426878 CFAP70Q5T0N1 1121 aa25.07■■□□□ 1.6
LMCD1-204ENST00000426878 TMEM132EQ6IEE7 984 aa25.07■■□□□ 1.6
LMCD1-204ENST00000426878 ROBO1Q9Y6N7 1651 aa25.06■■□□□ 1.6
LMCD1-204ENST00000426878 KDM2AQ9Y2K7 1162 aa25.05■■□□□ 1.6
LMCD1-204ENST00000426878 YTHDC2Q9H6S0 1430 aaKnown RBP25.05■■□□□ 1.6
LMCD1-204ENST00000426878 KNDC1Q76NI1 1749 aa25.04■■□□□ 1.6
LMCD1-204ENST00000426878 NALCNQ8IZF0 1738 aa25.04■■□□□ 1.6
LMCD1-204ENST00000426878 SIRT1Q96EB6 747 aa25.03■■□□□ 1.6
LMCD1-204ENST00000426878 STK26Q9P289 416 aa25.03■■□□□ 1.6
LMCD1-204ENST00000426878 MST1RQ04912 1400 aa24.99■■□□□ 1.59
LMCD1-204ENST00000426878 ADGRB1O14514 1584 aa24.99■■□□□ 1.59
LMCD1-204ENST00000426878 WAPLQ7Z5K2 1190 aa24.96■■□□□ 1.59
LMCD1-204ENST00000426878 SIN3AQ96ST3 1273 aa24.96■■□□□ 1.59
LMCD1-204ENST00000426878 BRINP3Q76B58 766 aa24.95■■□□□ 1.58
LMCD1-204ENST00000426878 DLC1Q96QB1 1528 aa24.94■■□□□ 1.58
LMCD1-204ENST00000426878 PLEKHH1Q9ULM0 1364 aa24.93■■□□□ 1.58
LMCD1-204ENST00000426878 CDC42BPGQ6DT37 1551 aa24.92■■□□□ 1.58
LMCD1-204ENST00000426878 L3MBTL2Q969R5 705 aa24.92■■□□□ 1.58
LMCD1-204ENST00000426878 C1orf167Q5SNV9 1468 aa24.91■■□□□ 1.58
LMCD1-204ENST00000426878 AHDC1Q5TGY3 1603 aaPredicted RBP24.91■■□□□ 1.58
LMCD1-204ENST00000426878 KIAA1210Q9ULL0 1709 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms