RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 KIF1BO60333 1816 aa34.71■■■■□ 3.15
PDGFA-205ENST00000426681 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.69■■■■□ 3.14
PDGFA-205ENST00000426681 LTBP4Q8N2S1 1624 aa34.66■■■■□ 3.14
PDGFA-205ENST00000426681 CCDC144AA2RUR9 1427 aa34.66■■■■□ 3.14
PDGFA-205ENST00000426681 ZNF335Q9H4Z2 1342 aaPredicted RBP34.65■■■■□ 3.14
PDGFA-205ENST00000426681 PLEKHG1Q9ULL1 1385 aa34.62■■■■□ 3.13
PDGFA-205ENST00000426681 PPP1R15AO75807 674 aaPredicted RBP34.61■■■■□ 3.13
PDGFA-205ENST00000426681 ZNF326Q5BKZ1 582 aaKnown RBP34.61■■■■□ 3.13
PDGFA-205ENST00000426681 CERKQ8TCT0 537 aa34.59■■■■□ 3.13
PDGFA-205ENST00000426681 ANKRD30BQ9BXX2 1392 aa34.57■■■■□ 3.12
PDGFA-205ENST00000426681 NEXMIFQ5QGS0 1516 aa34.55■■■■□ 3.12
PDGFA-205ENST00000426681 NUTM2DQ5VT03 806 aaPredicted RBP34.55■■■■□ 3.12
PDGFA-205ENST00000426681 RPGRIP1LQ68CZ1 1315 aa34.55■■■■□ 3.12
PDGFA-205ENST00000426681 SPATA31E1Q6ZUB1 1445 aa34.54■■■■□ 3.12
PDGFA-205ENST00000426681 BCANQ96GW7 911 aa34.51■■■■□ 3.12
PDGFA-205ENST00000426681 SLC26A8Q96RN1 970 aa34.51■■■■□ 3.12
PDGFA-205ENST00000426681 CPS1P31327 1500 aa34.5■■■■□ 3.11
PDGFA-205ENST00000426681 TBX22Q9Y458 520 aa34.47■■■■□ 3.11
PDGFA-205ENST00000426681 STRCP1A6NGW2 1772 aa34.46■■■■□ 3.11
PDGFA-205ENST00000426681 ADAMTS13Q76LX8 1427 aa34.46■■■■□ 3.11
PDGFA-205ENST00000426681 IQSEC2Q5JU85 1478 aa34.46■■■■□ 3.11
PDGFA-205ENST00000426681 VGFO15240 615 aaPredicted RBP34.45■■■■□ 3.11
PDGFA-205ENST00000426681 PPLO60437 1756 aa34.44■■■■□ 3.1
PDGFA-205ENST00000426681 DIP2AQ14689 1571 aa34.44■■■■□ 3.1
PDGFA-205ENST00000426681 SETBP1Q9Y6X0 1596 aa34.44■■■■□ 3.1
PDGFA-205ENST00000426681 SENP3Q9H4L4 574 aaPredicted RBP34.43■■■■□ 3.1
PDGFA-205ENST00000426681 RGL3Q3MIN7 710 aa34.42■■■■□ 3.1
PDGFA-205ENST00000426681 NRXN3Q9Y4C0 1643 aa34.41■■■■□ 3.1
PDGFA-205ENST00000426681 KCNA6P17658 529 aa34.4■■■■□ 3.1
PDGFA-205ENST00000426681 IFT172Q9UG01 1749 aa34.37■■■■□ 3.09
PDGFA-205ENST00000426681 PIK3R4Q99570 1358 aa34.36■■■■□ 3.09
PDGFA-205ENST00000426681 CHD2O14647 1828 aaKnown RBP34.35■■■■□ 3.09
PDGFA-205ENST00000426681 NWD1Q149M9 1564 aa34.35■■■■□ 3.09
PDGFA-205ENST00000426681 FBXO41Q8TF61 875 aa34.34■■■■□ 3.09
PDGFA-205ENST00000426681 LRRC7Q96NW7 1537 aa34.34■■■■□ 3.09
PDGFA-205ENST00000426681 DHX57Q6P158 1386 aaKnown RBP34.29■■■■□ 3.08
PDGFA-205ENST00000426681 NKTRP30414 1462 aaKnown RBP34.28■■■■□ 3.08
PDGFA-205ENST00000426681 ADGRF5Q8IZF2 1346 aa34.28■■■■□ 3.08
PDGFA-205ENST00000426681 METP08581 1390 aa34.24■■■■□ 3.07
PDGFA-205ENST00000426681 ALKQ9UM73 1620 aa34.24■■■■□ 3.07
PDGFA-205ENST00000426681 MYOM2P54296 1465 aa34.23■■■■□ 3.07
PDGFA-205ENST00000426681 SETD1AO15047 1707 aaKnown RBP34.23■■■■□ 3.07
PDGFA-205ENST00000426681 PTPRUQ92729 1446 aa34.22■■■■□ 3.07
PDGFA-205ENST00000426681 ILDR1Q86SU0 546 aaPredicted RBP34.22■■■■□ 3.07
PDGFA-205ENST00000426681 NRXN1Q9ULB1 1477 aa34.21■■■■□ 3.07
PDGFA-205ENST00000426681 PROSER2Q86WR7 435 aaPredicted RBP34.21■■■■□ 3.07
PDGFA-205ENST00000426681 PIK3C2GO75747 1445 aa34.21■■■■□ 3.07
PDGFA-205ENST00000426681 XIRP1Q702N8 1843 aaKnown RBP34.2■■■■□ 3.07
PDGFA-205ENST00000426681 PCGF6Q9BYE7 350 aa34.2■■■■□ 3.07
PDGFA-205ENST00000426681 AMOTL2Q9Y2J4 779 aa34.2■■■■□ 3.07
PDGFA-205ENST00000426681 STAC3Q96MF2 364 aa34.19■■■■□ 3.06
PDGFA-205ENST00000426681 TMEM94Q12767 1356 aa34.18■■■■□ 3.06
PDGFA-205ENST00000426681 XRN1Q8IZH2 1706 aaKnown RBP34.17■■■■□ 3.06
PDGFA-205ENST00000426681 DCAF11Q8TEB1 546 aa34.13■■■■□ 3.05
PDGFA-205ENST00000426681 UBAP1LF5GYI3 381 aa34.12■■■■□ 3.05
PDGFA-205ENST00000426681 NCOA3Q9Y6Q9 1424 aa34.12■■■■□ 3.05
PDGFA-205ENST00000426681 C14orf93Q9H972 538 aaKnown RBP34.1■■■■□ 3.05
PDGFA-205ENST00000426681 TOM1O60784 492 aa34.09■■■■□ 3.05
PDGFA-205ENST00000426681 PRAG1Q86YV5 1406 aa34.08■■■■□ 3.05
PDGFA-205ENST00000426681 RBM33Q96EV2 1170 aaKnown RBP34.08■■■■□ 3.05
PDGFA-205ENST00000426681 SIN3AQ96ST3 1273 aa34.08■■■■□ 3.05
PDGFA-205ENST00000426681 KDM2AQ9Y2K7 1162 aa34.08■■■■□ 3.05
PDGFA-205ENST00000426681 LAMC1P11047 1609 aa34.06■■■■□ 3.04
PDGFA-205ENST00000426681 CFAP70Q5T0N1 1121 aa34.02■■■■□ 3.04
PDGFA-205ENST00000426681 ASXL1Q8IXJ9 1541 aa34.02■■■■□ 3.04
PDGFA-205ENST00000426681 PTCH1Q13635 1447 aa34.02■■■■□ 3.04
PDGFA-205ENST00000426681 MSH6P52701 1360 aa34■■■■□ 3.03
PDGFA-205ENST00000426681 LRPPRCP42704 1394 aaKnown RBP33.99■■■■□ 3.03
PDGFA-205ENST00000426681 NEUROD1Q13562 356 aa33.99■■■■□ 3.03
PDGFA-205ENST00000426681 TMEM132EQ6IEE7 984 aa33.99■■■■□ 3.03
PDGFA-205ENST00000426681 ROBO2Q9HCK4 1378 aa33.98■■■■□ 3.03
PDGFA-205ENST00000426681 ABCC11Q96J66 1382 aa33.97■■■■□ 3.03
PDGFA-205ENST00000426681 TECPR2O15040 1411 aa33.96■■■■□ 3.03
PDGFA-205ENST00000426681 L3MBTL2Q969R5 705 aa33.96■■■■□ 3.03
PDGFA-205ENST00000426681 C19orf44Q9H6X5 657 aa33.96■■■■□ 3.03
PDGFA-205ENST00000426681 C14orf37Q86TY3 774 aa33.95■■■■□ 3.03
PDGFA-205ENST00000426681 YTHDC2Q9H6S0 1430 aaKnown RBP33.95■■■■□ 3.02
PDGFA-205ENST00000426681 KNDC1Q76NI1 1749 aa33.92■■■■□ 3.02
PDGFA-205ENST00000426681 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.91■■■■□ 3.02
PDGFA-205ENST00000426681 PIP4K2BP78356 416 aa33.91■■■■□ 3.02
PDGFA-205ENST00000426681 STK26Q9P289 416 aa33.91■■■■□ 3.02
PDGFA-205ENST00000426681 ADGRB1O14514 1584 aa33.9■■■■□ 3.02
PDGFA-205ENST00000426681 SIRT1Q96EB6 747 aa33.89■■■■□ 3.02
PDGFA-205ENST00000426681 ADGRL3Q9HAR2 1447 aa33.88■■■■□ 3.01
PDGFA-205ENST00000426681 DCCP43146 1447 aa33.87■■■■□ 3.01
PDGFA-205ENST00000426681 KIAA1210Q9ULL0 1709 aa33.87■■■■□ 3.01
PDGFA-205ENST00000426681 CADPS2Q86UW7 1296 aa33.86■■■■□ 3.01
PDGFA-205ENST00000426681 SCAF1Q9H7N4 1312 aaKnown RBP33.85■■■■□ 3.01
PDGFA-205ENST00000426681 ATF3P18847 181 aa33.85■■■■□ 3.01
PDGFA-205ENST00000426681 SLAIN2Q9P270 581 aa33.84■■■■□ 3.01
PDGFA-205ENST00000426681 FAM135BQ49AJ0 1406 aa33.84■■■■□ 3.01
PDGFA-205ENST00000426681 NALCNQ8IZF0 1738 aa33.84■■■■□ 3.01
PDGFA-205ENST00000426681 CLSPNQ9HAW4 1339 aa33.81■■■■□ 3
PDGFA-205ENST00000426681 DLC1Q96QB1 1528 aa33.8■■■■□ 3
PDGFA-205ENST00000426681 WAPLQ7Z5K2 1190 aa33.79■■■■□ 3
PDGFA-205ENST00000426681 TONSLQ96HA7 1378 aa33.78■■■■□ 3
PDGFA-205ENST00000426681 PLEKHH1Q9ULM0 1364 aa33.76■■■■□ 3
PDGFA-205ENST00000426681 ROBO1Q9Y6N7 1651 aa33.72■■■□□ 2.99
PDGFA-205ENST00000426681 NBPF1Q3BBV0 1214 aa33.72■■■□□ 2.99
PDGFA-205ENST00000426681 TRAK1Q9UPV9 953 aa33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms