RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ZFYVE9O95405 1425 aa20.46■□□□□ 0.87
SNX3-204ENST00000426155 CHGAP10645 457 aaKnown RBP20.46■□□□□ 0.87
SNX3-204ENST00000426155 EID1Q9Y6B2 187 aa20.45■□□□□ 0.86
SNX3-204ENST00000426155 RIMS2Q9UQ26 1411 aa20.44■□□□□ 0.86
SNX3-204ENST00000426155 KIF1BO60333 1816 aa20.43■□□□□ 0.86
SNX3-204ENST00000426155 CPS1P31327 1500 aa20.43■□□□□ 0.86
SNX3-204ENST00000426155 SETD5Q9C0A6 1442 aa20.42■□□□□ 0.86
SNX3-204ENST00000426155 IQSEC2Q5JU85 1478 aa20.42■□□□□ 0.86
SNX3-204ENST00000426155 SLC4A1APQ9BWU0 796 aaKnown RBP20.41■□□□□ 0.86
SNX3-204ENST00000426155 NUTM2DQ5VT03 806 aaPredicted RBP20.39■□□□□ 0.85
SNX3-204ENST00000426155 XIRP1Q702N8 1843 aaKnown RBP20.39■□□□□ 0.85
SNX3-204ENST00000426155 RAB3GAP2Q9H2M9 1393 aa20.38■□□□□ 0.85
SNX3-204ENST00000426155 SLC26A8Q96RN1 970 aa20.37■□□□□ 0.85
SNX3-204ENST00000426155 PLEKHG1Q9ULL1 1385 aa20.35■□□□□ 0.85
SNX3-204ENST00000426155 PPP1R15AO75807 674 aaPredicted RBP20.35■□□□□ 0.85
SNX3-204ENST00000426155 NEXMIFQ5QGS0 1516 aa20.35■□□□□ 0.85
SNX3-204ENST00000426155 LRRC7Q96NW7 1537 aa20.35■□□□□ 0.85
SNX3-204ENST00000426155 NRXN3Q9Y4C0 1643 aa20.34■□□□□ 0.85
SNX3-204ENST00000426155 BCANQ96GW7 911 aa20.33■□□□□ 0.85
SNX3-204ENST00000426155 NWD1Q149M9 1564 aa20.33■□□□□ 0.84
SNX3-204ENST00000426155 CHD2O14647 1828 aaKnown RBP20.32■□□□□ 0.84
SNX3-204ENST00000426155 MPHOSPH9Q99550 1183 aa20.32■□□□□ 0.84
SNX3-204ENST00000426155 ADAMTS13Q76LX8 1427 aa20.3■□□□□ 0.84
SNX3-204ENST00000426155 ZNF326Q5BKZ1 582 aaKnown RBP20.3■□□□□ 0.84
SNX3-204ENST00000426155 PPLO60437 1756 aa20.3■□□□□ 0.84
SNX3-204ENST00000426155 ALKQ9UM73 1620 aa20.3■□□□□ 0.84
SNX3-204ENST00000426155 DIP2AQ14689 1571 aa20.29■□□□□ 0.84
SNX3-204ENST00000426155 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.28■□□□□ 0.84
SNX3-204ENST00000426155 SETBP1Q9Y6X0 1596 aa20.27■□□□□ 0.84
SNX3-204ENST00000426155 UBAP1LF5GYI3 381 aa20.27■□□□□ 0.84
SNX3-204ENST00000426155 HDGFP51858 240 aaKnown RBP20.26■□□□□ 0.83
SNX3-204ENST00000426155 IFT172Q9UG01 1749 aa20.25■□□□□ 0.83
SNX3-204ENST00000426155 CCDC144AA2RUR9 1427 aa20.25■□□□□ 0.83
SNX3-204ENST00000426155 NKTRP30414 1462 aaKnown RBP20.24■□□□□ 0.83
SNX3-204ENST00000426155 SETD1AO15047 1707 aaKnown RBP20.23■□□□□ 0.83
SNX3-204ENST00000426155 KCNA6P17658 529 aa20.23■□□□□ 0.83
SNX3-204ENST00000426155 RBM33Q96EV2 1170 aaKnown RBP20.23■□□□□ 0.83
SNX3-204ENST00000426155 TMEM94Q12767 1356 aa20.21■□□□□ 0.83
SNX3-204ENST00000426155 XRN1Q8IZH2 1706 aaKnown RBP20.2■□□□□ 0.82
SNX3-204ENST00000426155 TBX22Q9Y458 520 aa20.2■□□□□ 0.82
SNX3-204ENST00000426155 SPATA31E1Q6ZUB1 1445 aa20.19■□□□□ 0.82
SNX3-204ENST00000426155 PTPRUQ92729 1446 aa20.19■□□□□ 0.82
SNX3-204ENST00000426155 PIP4K2BP78356 416 aa20.18■□□□□ 0.82
SNX3-204ENST00000426155 SCAF1Q9H7N4 1312 aaKnown RBP20.18■□□□□ 0.82
SNX3-204ENST00000426155 ACIN1Q9UKV3 1341 aaKnown RBP20.17■□□□□ 0.82
SNX3-204ENST00000426155 PROSER2Q86WR7 435 aaPredicted RBP20.16■□□□□ 0.82
SNX3-204ENST00000426155 TOM1O60784 492 aa20.15■□□□□ 0.82
SNX3-204ENST00000426155 RGL3Q3MIN7 710 aa20.15■□□□□ 0.82
SNX3-204ENST00000426155 METP08581 1390 aa20.15■□□□□ 0.82
SNX3-204ENST00000426155 PIK3R4Q99570 1358 aa20.14■□□□□ 0.81
SNX3-204ENST00000426155 RPGRIP1LQ68CZ1 1315 aa20.12■□□□□ 0.81
SNX3-204ENST00000426155 ANKRD30BQ9BXX2 1392 aa20.11■□□□□ 0.81
SNX3-204ENST00000426155 HRCP23327 699 aa20.11■□□□□ 0.81
SNX3-204ENST00000426155 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.1■□□□□ 0.81
SNX3-204ENST00000426155 AMOTL2Q9Y2J4 779 aa20.1■□□□□ 0.81
SNX3-204ENST00000426155 ADGRF5Q8IZF2 1346 aa20.09■□□□□ 0.81
SNX3-204ENST00000426155 VGFO15240 615 aaPredicted RBP20.09■□□□□ 0.81
SNX3-204ENST00000426155 NALCNQ8IZF0 1738 aa20.08■□□□□ 0.81
SNX3-204ENST00000426155 ROBO1Q9Y6N7 1651 aa20.08■□□□□ 0.81
SNX3-204ENST00000426155 MAPK8IP2Q13387 824 aaPredicted RBP20.08■□□□□ 0.81
SNX3-204ENST00000426155 MSH6P52701 1360 aa20.07■□□□□ 0.8
SNX3-204ENST00000426155 ASXL1Q8IXJ9 1541 aa20.07■□□□□ 0.8
SNX3-204ENST00000426155 HSPA1LP34931 641 aa20.06■□□□□ 0.8
SNX3-204ENST00000426155 PIK3C2GO75747 1445 aa20.04■□□□□ 0.8
SNX3-204ENST00000426155 C14orf37Q86TY3 774 aa20.03■□□□□ 0.8
SNX3-204ENST00000426155 MYOM2P54296 1465 aa20.03■□□□□ 0.8
SNX3-204ENST00000426155 NRXN1Q9ULB1 1477 aa20.01■□□□□ 0.79
SNX3-204ENST00000426155 NCOA3Q9Y6Q9 1424 aa20.01■□□□□ 0.79
SNX3-204ENST00000426155 KNDC1Q76NI1 1749 aa20■□□□□ 0.79
SNX3-204ENST00000426155 LAMC1P11047 1609 aa20■□□□□ 0.79
SNX3-204ENST00000426155 PTCH1Q13635 1447 aa20■□□□□ 0.79
SNX3-204ENST00000426155 ROBO2Q9HCK4 1378 aa19.99■□□□□ 0.79
SNX3-204ENST00000426155 PRAG1Q86YV5 1406 aa19.97■□□□□ 0.79
SNX3-204ENST00000426155 FAM135BQ49AJ0 1406 aa19.96■□□□□ 0.79
SNX3-204ENST00000426155 ADGRL3Q9HAR2 1447 aa19.96■□□□□ 0.79
SNX3-204ENST00000426155 PHLPP1O60346 1717 aa19.96■□□□□ 0.79
SNX3-204ENST00000426155 TMEM132EQ6IEE7 984 aa19.95■□□□□ 0.78
SNX3-204ENST00000426155 DHX57Q6P158 1386 aaKnown RBP19.95■□□□□ 0.78
SNX3-204ENST00000426155 C19orf44Q9H6X5 657 aa19.94■□□□□ 0.78
SNX3-204ENST00000426155 SLAIN2Q9P270 581 aa19.94■□□□□ 0.78
SNX3-204ENST00000426155 DCCP43146 1447 aa19.93■□□□□ 0.78
SNX3-204ENST00000426155 TRIM26Q12899 539 aaPredicted RBP19.92■□□□□ 0.78
SNX3-204ENST00000426155 CFAP70Q5T0N1 1121 aa19.92■□□□□ 0.78
SNX3-204ENST00000426155 DCAF11Q8TEB1 546 aa19.92■□□□□ 0.78
SNX3-204ENST00000426155 STK26Q9P289 416 aa19.92■□□□□ 0.78
SNX3-204ENST00000426155 KDM2AQ9Y2K7 1162 aa19.92■□□□□ 0.78
SNX3-204ENST00000426155 TECPR2O15040 1411 aa19.92■□□□□ 0.78
SNX3-204ENST00000426155 MST1RQ04912 1400 aa19.92■□□□□ 0.78
SNX3-204ENST00000426155 MED1Q15648 1581 aaPredicted RBP19.91■□□□□ 0.78
SNX3-204ENST00000426155 ATF3P18847 181 aa19.91■□□□□ 0.78
SNX3-204ENST00000426155 CADPS2Q86UW7 1296 aa19.91■□□□□ 0.78
SNX3-204ENST00000426155 LRPPRCP42704 1394 aaKnown RBP19.91■□□□□ 0.78
SNX3-204ENST00000426155 YTHDC2Q9H6S0 1430 aaKnown RBP19.91■□□□□ 0.78
SNX3-204ENST00000426155 ADGRB1O14514 1584 aa19.9■□□□□ 0.78
SNX3-204ENST00000426155 COL16A1Q07092 1604 aaPredicted RBP19.89■□□□□ 0.77
SNX3-204ENST00000426155 C14orf93Q9H972 538 aaKnown RBP19.89■□□□□ 0.77
SNX3-204ENST00000426155 PLEKHH1Q9ULM0 1364 aa19.89■□□□□ 0.77
SNX3-204ENST00000426155 DISP3Q9P2K9 1392 aa19.87■□□□□ 0.77
SNX3-204ENST00000426155 NHSL1Q5SYE7 1610 aa19.87■□□□□ 0.77
SNX3-204ENST00000426155 AHDC1Q5TGY3 1603 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms