RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 PPP1R15AO75807 674 aaPredicted RBP26.19■■□□□ 1.78
SLC6A1-202ENST00000425938 PIP4K2BP78356 416 aa26.19■■□□□ 1.78
SLC6A1-202ENST00000425938 SCAF1Q9H7N4 1312 aaKnown RBP26.18■■□□□ 1.78
SLC6A1-202ENST00000425938 ZFYVE9O95405 1425 aa26.18■■□□□ 1.78
SLC6A1-202ENST00000425938 BCANQ96GW7 911 aa26.18■■□□□ 1.78
SLC6A1-202ENST00000425938 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.16■■□□□ 1.78
SLC6A1-202ENST00000425938 SLC26A8Q96RN1 970 aa26.16■■□□□ 1.78
SLC6A1-202ENST00000425938 SLC4A1APQ9BWU0 796 aaKnown RBP26.15■■□□□ 1.78
SLC6A1-202ENST00000425938 TRPM2O94759 1503 aa26.14■■□□□ 1.77
SLC6A1-202ENST00000425938 PLEKHG1Q9ULL1 1385 aa26.13■■□□□ 1.77
SLC6A1-202ENST00000425938 KCNA6P17658 529 aa26.13■■□□□ 1.77
SLC6A1-202ENST00000425938 ALKQ9UM73 1620 aa26.13■■□□□ 1.77
SLC6A1-202ENST00000425938 DISP3Q9P2K9 1392 aa26.12■■□□□ 1.77
SLC6A1-202ENST00000425938 CLTCL1P53675 1640 aa26.1■■□□□ 1.77
SLC6A1-202ENST00000425938 KIF1BO60333 1816 aa26.09■■□□□ 1.77
SLC6A1-202ENST00000425938 HSPA1LP34931 641 aa26.09■■□□□ 1.77
SLC6A1-202ENST00000425938 ACIN1Q9UKV3 1341 aaKnown RBP26.09■■□□□ 1.77
SLC6A1-202ENST00000425938 ZNF326Q5BKZ1 582 aaKnown RBP26.07■■□□□ 1.76
SLC6A1-202ENST00000425938 NUTM2DQ5VT03 806 aaPredicted RBP26.07■■□□□ 1.76
SLC6A1-202ENST00000425938 SENP3Q9H4L4 574 aaPredicted RBP26.07■■□□□ 1.76
SLC6A1-202ENST00000425938 XIRP1Q702N8 1843 aaKnown RBP26.07■■□□□ 1.76
SLC6A1-202ENST00000425938 SETD5Q9C0A6 1442 aa26.06■■□□□ 1.76
SLC6A1-202ENST00000425938 NWD1Q149M9 1564 aa26.04■■□□□ 1.76
SLC6A1-202ENST00000425938 PROSER2Q86WR7 435 aaPredicted RBP26.04■■□□□ 1.76
SLC6A1-202ENST00000425938 TMEM94Q12767 1356 aa26.04■■□□□ 1.76
SLC6A1-202ENST00000425938 NKTRP30414 1462 aaKnown RBP26.04■■□□□ 1.76
SLC6A1-202ENST00000425938 TBX22Q9Y458 520 aa26.03■■□□□ 1.76
SLC6A1-202ENST00000425938 DIP2AQ14689 1571 aa26.01■■□□□ 1.75
SLC6A1-202ENST00000425938 MPHOSPH9Q99550 1183 aa26.01■■□□□ 1.75
SLC6A1-202ENST00000425938 CHD2O14647 1828 aaKnown RBP26■■□□□ 1.75
SLC6A1-202ENST00000425938 ADAMTS13Q76LX8 1427 aa25.97■■□□□ 1.75
SLC6A1-202ENST00000425938 FOXD1Q16676 465 aa25.97■■□□□ 1.75
SLC6A1-202ENST00000425938 RAB3GAP2Q9H2M9 1393 aa25.95■■□□□ 1.75
SLC6A1-202ENST00000425938 NEXMIFQ5QGS0 1516 aa25.95■■□□□ 1.74
SLC6A1-202ENST00000425938 RBM33Q96EV2 1170 aaKnown RBP25.95■■□□□ 1.74
SLC6A1-202ENST00000425938 PIK3R4Q99570 1358 aa25.95■■□□□ 1.74
SLC6A1-202ENST00000425938 CCDC144AA2RUR9 1427 aa25.93■■□□□ 1.74
SLC6A1-202ENST00000425938 SETBP1Q9Y6X0 1596 aa25.93■■□□□ 1.74
SLC6A1-202ENST00000425938 FAM135BQ49AJ0 1406 aa25.91■■□□□ 1.74
SLC6A1-202ENST00000425938 MSH6P52701 1360 aa25.91■■□□□ 1.74
SLC6A1-202ENST00000425938 NRXN3Q9Y4C0 1643 aa25.9■■□□□ 1.74
SLC6A1-202ENST00000425938 ILDR2Q71H61 639 aa25.9■■□□□ 1.74
SLC6A1-202ENST00000425938 RPGRIP1LQ68CZ1 1315 aa25.89■■□□□ 1.74
SLC6A1-202ENST00000425938 NCOA3Q9Y6Q9 1424 aa25.88■■□□□ 1.73
SLC6A1-202ENST00000425938 VGFO15240 615 aaPredicted RBP25.88■■□□□ 1.73
SLC6A1-202ENST00000425938 MED1Q15648 1581 aaPredicted RBP25.86■■□□□ 1.73
SLC6A1-202ENST00000425938 PPLO60437 1756 aa25.85■■□□□ 1.73
SLC6A1-202ENST00000425938 AMOTL2Q9Y2J4 779 aa25.84■■□□□ 1.73
SLC6A1-202ENST00000425938 SLAIN2Q9P270 581 aa25.82■■□□□ 1.72
SLC6A1-202ENST00000425938 PTPRUQ92729 1446 aa25.81■■□□□ 1.72
SLC6A1-202ENST00000425938 ROBO1Q9Y6N7 1651 aa25.81■■□□□ 1.72
SLC6A1-202ENST00000425938 HRCP23327 699 aa25.81■■□□□ 1.72
SLC6A1-202ENST00000425938 C14orf37Q86TY3 774 aa25.81■■□□□ 1.72
SLC6A1-202ENST00000425938 RGL3Q3MIN7 710 aa25.79■■□□□ 1.72
SLC6A1-202ENST00000425938 XRN1Q8IZH2 1706 aaKnown RBP25.79■■□□□ 1.72
SLC6A1-202ENST00000425938 METP08581 1390 aa25.79■■□□□ 1.72
SLC6A1-202ENST00000425938 SPATA31E1Q6ZUB1 1445 aa25.79■■□□□ 1.72
SLC6A1-202ENST00000425938 C19orf44Q9H6X5 657 aa25.78■■□□□ 1.72
SLC6A1-202ENST00000425938 ANKRD30BQ9BXX2 1392 aa25.75■■□□□ 1.71
SLC6A1-202ENST00000425938 CADPS2Q86UW7 1296 aa25.75■■□□□ 1.71
SLC6A1-202ENST00000425938 IFT172Q9UG01 1749 aa25.74■■□□□ 1.71
SLC6A1-202ENST00000425938 ATF3P18847 181 aa25.74■■□□□ 1.71
SLC6A1-202ENST00000425938 SETD1AO15047 1707 aaKnown RBP25.74■■□□□ 1.71
SLC6A1-202ENST00000425938 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.74■■□□□ 1.71
SLC6A1-202ENST00000425938 SOCS7O14512 581 aa25.73■■□□□ 1.71
SLC6A1-202ENST00000425938 PHF23Q9BUL5 403 aaPredicted RBP25.71■■□□□ 1.71
SLC6A1-202ENST00000425938 ADGRF5Q8IZF2 1346 aa25.69■■□□□ 1.7
SLC6A1-202ENST00000425938 DCCP43146 1447 aa25.67■■□□□ 1.7
SLC6A1-202ENST00000425938 PHLPP1O60346 1717 aa25.66■■□□□ 1.7
SLC6A1-202ENST00000425938 PTCH1Q13635 1447 aa25.64■■□□□ 1.7
SLC6A1-202ENST00000425938 PIK3C2GO75747 1445 aa25.62■■□□□ 1.69
SLC6A1-202ENST00000425938 PRAG1Q86YV5 1406 aa25.61■■□□□ 1.69
SLC6A1-202ENST00000425938 ADGRL3Q9HAR2 1447 aa25.61■■□□□ 1.69
SLC6A1-202ENST00000425938 MYOM2P54296 1465 aa25.6■■□□□ 1.69
SLC6A1-202ENST00000425938 JCADQ9P266 1359 aa25.59■■□□□ 1.69
SLC6A1-202ENST00000425938 NALCNQ8IZF0 1738 aa25.59■■□□□ 1.69
SLC6A1-202ENST00000425938 ROBO2Q9HCK4 1378 aa25.58■■□□□ 1.69
SLC6A1-202ENST00000425938 COL16A1Q07092 1604 aaPredicted RBP25.58■■□□□ 1.69
SLC6A1-202ENST00000425938 AHDC1Q5TGY3 1603 aaPredicted RBP25.57■■□□□ 1.68
SLC6A1-202ENST00000425938 BRINP3Q76B58 766 aa25.57■■□□□ 1.68
SLC6A1-202ENST00000425938 MST1RQ04912 1400 aa25.56■■□□□ 1.68
SLC6A1-202ENST00000425938 NRXN1Q9ULB1 1477 aa25.55■■□□□ 1.68
SLC6A1-202ENST00000425938 LAMC1P11047 1609 aa25.55■■□□□ 1.68
SLC6A1-202ENST00000425938 STK26Q9P289 416 aa25.53■■□□□ 1.68
SLC6A1-202ENST00000425938 LRPPRCP42704 1394 aaKnown RBP25.53■■□□□ 1.68
SLC6A1-202ENST00000425938 TMEM132EQ6IEE7 984 aa25.52■■□□□ 1.68
SLC6A1-202ENST00000425938 C14orf93Q9H972 538 aaKnown RBP25.52■■□□□ 1.68
SLC6A1-202ENST00000425938 RGS17Q9UGC6 210 aaPredicted RBP25.52■■□□□ 1.68
SLC6A1-202ENST00000425938 ASXL1Q8IXJ9 1541 aa25.52■■□□□ 1.68
SLC6A1-202ENST00000425938 KNDC1Q76NI1 1749 aa25.51■■□□□ 1.68
SLC6A1-202ENST00000425938 TECPR2O15040 1411 aa25.51■■□□□ 1.67
SLC6A1-202ENST00000425938 ABCC11Q96J66 1382 aa25.5■■□□□ 1.67
SLC6A1-202ENST00000425938 DCAF11Q8TEB1 546 aa25.49■■□□□ 1.67
SLC6A1-202ENST00000425938 STAC3Q96MF2 364 aa25.49■■□□□ 1.67
SLC6A1-202ENST00000425938 YTHDC2Q9H6S0 1430 aaKnown RBP25.48■■□□□ 1.67
SLC6A1-202ENST00000425938 SPATA31A6Q5VVP1 1343 aa25.48■■□□□ 1.67
SLC6A1-202ENST00000425938 CFAP70Q5T0N1 1121 aa25.48■■□□□ 1.67
SLC6A1-202ENST00000425938 KDM2AQ9Y2K7 1162 aa25.47■■□□□ 1.67
SLC6A1-202ENST00000425938 DHX57Q6P158 1386 aaKnown RBP25.46■■□□□ 1.67
SLC6A1-202ENST00000425938 C1orf167Q5SNV9 1468 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms