RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 SLC26A8Q96RN1 970 aa24.98■■□□□ 1.59
SHANK2-207ENST00000425049 ZFYVE9O95405 1425 aa24.97■■□□□ 1.59
SHANK2-207ENST00000425049 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.97■■□□□ 1.59
SHANK2-207ENST00000425049 HFM1A2PYH4 1435 aa24.96■■□□□ 1.59
SHANK2-207ENST00000425049 MYO5BQ9ULV0 1848 aa24.96■■□□□ 1.59
SHANK2-207ENST00000425049 PLEKHG1Q9ULL1 1385 aa24.95■■□□□ 1.59
SHANK2-207ENST00000425049 SENP3Q9H4L4 574 aaPredicted RBP24.94■■□□□ 1.58
SHANK2-207ENST00000425049 KCNA6P17658 529 aa24.93■■□□□ 1.58
SHANK2-207ENST00000425049 TRIM52Q96A61 297 aa24.93■■□□□ 1.58
SHANK2-207ENST00000425049 SPHKAPQ2M3C7 1700 aa24.92■■□□□ 1.58
SHANK2-207ENST00000425049 DISP3Q9P2K9 1392 aa24.92■■□□□ 1.58
SHANK2-207ENST00000425049 HSPA1LP34931 641 aa24.88■■□□□ 1.57
SHANK2-207ENST00000425049 NUTM2DQ5VT03 806 aaPredicted RBP24.88■■□□□ 1.57
SHANK2-207ENST00000425049 NKTRP30414 1462 aaKnown RBP24.88■■□□□ 1.57
SHANK2-207ENST00000425049 PROSER2Q86WR7 435 aaPredicted RBP24.87■■□□□ 1.57
SHANK2-207ENST00000425049 TMEM94Q12767 1356 aa24.87■■□□□ 1.57
SHANK2-207ENST00000425049 NWD1Q149M9 1564 aa24.86■■□□□ 1.57
SHANK2-207ENST00000425049 ZNF326Q5BKZ1 582 aaKnown RBP24.86■■□□□ 1.57
SHANK2-207ENST00000425049 ALKQ9UM73 1620 aa24.85■■□□□ 1.57
SHANK2-207ENST00000425049 TRPM2O94759 1503 aa24.85■■□□□ 1.57
SHANK2-207ENST00000425049 SLC4A1APQ9BWU0 796 aaKnown RBP24.83■■□□□ 1.57
SHANK2-207ENST00000425049 TBX22Q9Y458 520 aa24.83■■□□□ 1.57
SHANK2-207ENST00000425049 DIP2AQ14689 1571 aa24.83■■□□□ 1.57
SHANK2-207ENST00000425049 XIRP1Q702N8 1843 aaKnown RBP24.8■■□□□ 1.56
SHANK2-207ENST00000425049 CLTCL1P53675 1640 aa24.79■■□□□ 1.56
SHANK2-207ENST00000425049 ADAMTS13Q76LX8 1427 aa24.78■■□□□ 1.56
SHANK2-207ENST00000425049 RBM33Q96EV2 1170 aaKnown RBP24.78■■□□□ 1.56
SHANK2-207ENST00000425049 MSH6P52701 1360 aa24.78■■□□□ 1.56
SHANK2-207ENST00000425049 PIK3R4Q99570 1358 aa24.77■■□□□ 1.56
SHANK2-207ENST00000425049 CHD2O14647 1828 aaKnown RBP24.75■■□□□ 1.55
SHANK2-207ENST00000425049 C14orf37Q86TY3 774 aa24.74■■□□□ 1.55
SHANK2-207ENST00000425049 KIF1BO60333 1816 aa24.73■■□□□ 1.55
SHANK2-207ENST00000425049 SETBP1Q9Y6X0 1596 aa24.71■■□□□ 1.55
SHANK2-207ENST00000425049 NEXMIFQ5QGS0 1516 aa24.7■■□□□ 1.54
SHANK2-207ENST00000425049 FAM135BQ49AJ0 1406 aa24.69■■□□□ 1.54
SHANK2-207ENST00000425049 ACIN1Q9UKV3 1341 aaKnown RBP24.69■■□□□ 1.54
SHANK2-207ENST00000425049 NCOA3Q9Y6Q9 1424 aa24.69■■□□□ 1.54
SHANK2-207ENST00000425049 AMOTL2Q9Y2J4 779 aa24.67■■□□□ 1.54
SHANK2-207ENST00000425049 NRXN3Q9Y4C0 1643 aa24.66■■□□□ 1.54
SHANK2-207ENST00000425049 MED1Q15648 1581 aaPredicted RBP24.66■■□□□ 1.54
SHANK2-207ENST00000425049 FOXD1Q16676 465 aa24.65■■□□□ 1.54
SHANK2-207ENST00000425049 CCDC144AA2RUR9 1427 aa24.64■■□□□ 1.54
SHANK2-207ENST00000425049 VGFO15240 615 aaPredicted RBP24.64■■□□□ 1.54
SHANK2-207ENST00000425049 MPHOSPH9Q99550 1183 aa24.64■■□□□ 1.54
SHANK2-207ENST00000425049 SETD5Q9C0A6 1442 aa24.63■■□□□ 1.53
SHANK2-207ENST00000425049 ROBO1Q9Y6N7 1651 aa24.62■■□□□ 1.53
SHANK2-207ENST00000425049 RPGRIP1LQ68CZ1 1315 aa24.62■■□□□ 1.53
SHANK2-207ENST00000425049 PTPRUQ92729 1446 aa24.62■■□□□ 1.53
SHANK2-207ENST00000425049 SLAIN2Q9P270 581 aa24.62■■□□□ 1.53
SHANK2-207ENST00000425049 ATF3P18847 181 aa24.61■■□□□ 1.53
SHANK2-207ENST00000425049 ILDR2Q71H61 639 aa24.61■■□□□ 1.53
SHANK2-207ENST00000425049 CADPS2Q86UW7 1296 aa24.6■■□□□ 1.53
SHANK2-207ENST00000425049 PHF23Q9BUL5 403 aaPredicted RBP24.6■■□□□ 1.53
SHANK2-207ENST00000425049 C19orf44Q9H6X5 657 aa24.6■■□□□ 1.53
SHANK2-207ENST00000425049 METP08581 1390 aa24.59■■□□□ 1.53
SHANK2-207ENST00000425049 XRN1Q8IZH2 1706 aaKnown RBP24.59■■□□□ 1.53
SHANK2-207ENST00000425049 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.55■■□□□ 1.52
SHANK2-207ENST00000425049 RAB3GAP2Q9H2M9 1393 aa24.54■■□□□ 1.52
SHANK2-207ENST00000425049 DCCP43146 1447 aa24.52■■□□□ 1.52
SHANK2-207ENST00000425049 PPLO60437 1756 aa24.52■■□□□ 1.52
SHANK2-207ENST00000425049 RGL3Q3MIN7 710 aa24.52■■□□□ 1.52
SHANK2-207ENST00000425049 ANKRD30BQ9BXX2 1392 aa24.49■■□□□ 1.51
SHANK2-207ENST00000425049 SPATA31E1Q6ZUB1 1445 aa24.49■■□□□ 1.51
SHANK2-207ENST00000425049 PHLPP1O60346 1717 aa24.49■■□□□ 1.51
SHANK2-207ENST00000425049 PTCH1Q13635 1447 aa24.47■■□□□ 1.51
SHANK2-207ENST00000425049 ADGRL3Q9HAR2 1447 aa24.47■■□□□ 1.51
SHANK2-207ENST00000425049 SOCS7O14512 581 aa24.47■■□□□ 1.51
SHANK2-207ENST00000425049 SETD1AO15047 1707 aaKnown RBP24.45■■□□□ 1.5
SHANK2-207ENST00000425049 JCADQ9P266 1359 aa24.43■■□□□ 1.5
SHANK2-207ENST00000425049 ADGRF5Q8IZF2 1346 aa24.43■■□□□ 1.5
SHANK2-207ENST00000425049 MST1RQ04912 1400 aa24.41■■□□□ 1.5
SHANK2-207ENST00000425049 ROBO2Q9HCK4 1378 aa24.41■■□□□ 1.5
SHANK2-207ENST00000425049 AHDC1Q5TGY3 1603 aaPredicted RBP24.4■■□□□ 1.5
SHANK2-207ENST00000425049 BRINP3Q76B58 766 aa24.4■■□□□ 1.5
SHANK2-207ENST00000425049 PRAG1Q86YV5 1406 aa24.4■■□□□ 1.5
SHANK2-207ENST00000425049 NALCNQ8IZF0 1738 aa24.4■■□□□ 1.5
SHANK2-207ENST00000425049 COL16A1Q07092 1604 aaPredicted RBP24.39■■□□□ 1.5
SHANK2-207ENST00000425049 IFT172Q9UG01 1749 aa24.39■■□□□ 1.5
SHANK2-207ENST00000425049 ASXL1Q8IXJ9 1541 aa24.38■■□□□ 1.49
SHANK2-207ENST00000425049 PIK3C2GO75747 1445 aa24.36■■□□□ 1.49
SHANK2-207ENST00000425049 HRCP23327 699 aa24.35■■□□□ 1.49
SHANK2-207ENST00000425049 STK26Q9P289 416 aa24.34■■□□□ 1.49
SHANK2-207ENST00000425049 LRPPRCP42704 1394 aaKnown RBP24.32■■□□□ 1.48
SHANK2-207ENST00000425049 SPATA31A6Q5VVP1 1343 aa24.32■■□□□ 1.48
SHANK2-207ENST00000425049 MYOM2P54296 1465 aa24.32■■□□□ 1.48
SHANK2-207ENST00000425049 C1orf167Q5SNV9 1468 aa24.3■■□□□ 1.48
SHANK2-207ENST00000425049 TECPR2O15040 1411 aa24.29■■□□□ 1.48
SHANK2-207ENST00000425049 MEX3CQ5U5Q3 659 aaKnown RBP24.29■■□□□ 1.48
SHANK2-207ENST00000425049 TMEM132EQ6IEE7 984 aa24.28■■□□□ 1.48
SHANK2-207ENST00000425049 LAMC1P11047 1609 aa24.27■■□□□ 1.48
SHANK2-207ENST00000425049 NHSL1Q5SYE7 1610 aa24.27■■□□□ 1.48
SHANK2-207ENST00000425049 SHPRHQ149N8 1683 aa24.27■■□□□ 1.48
SHANK2-207ENST00000425049 ABCC11Q96J66 1382 aa24.27■■□□□ 1.48
SHANK2-207ENST00000425049 YTHDC2Q9H6S0 1430 aaKnown RBP24.27■■□□□ 1.48
SHANK2-207ENST00000425049 NRXN1Q9ULB1 1477 aa24.26■■□□□ 1.47
SHANK2-207ENST00000425049 RGS17Q9UGC6 210 aaPredicted RBP24.26■■□□□ 1.47
SHANK2-207ENST00000425049 CDC42BPGQ6DT37 1551 aa24.25■■□□□ 1.47
SHANK2-207ENST00000425049 KNDC1Q76NI1 1749 aa24.25■■□□□ 1.47
SHANK2-207ENST00000425049 LRRC59Q96AG4 307 aaKnown RBP24.25■■□□□ 1.47
SHANK2-207ENST00000425049 C14orf93Q9H972 538 aaKnown RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms