RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 PPP1R15AO75807 674 aaPredicted RBP21.74■■□□□ 1.07
TMEM248-204ENST00000424964 NEURL4Q96JN8 1562 aa21.74■■□□□ 1.07
TMEM248-204ENST00000424964 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.73■■□□□ 1.07
TMEM248-204ENST00000424964 NUTM2DQ5VT03 806 aaPredicted RBP21.72■■□□□ 1.07
TMEM248-204ENST00000424964 BCANQ96GW7 911 aa21.72■■□□□ 1.07
TMEM248-204ENST00000424964 MED14O60244 1454 aa21.71■■□□□ 1.07
TMEM248-204ENST00000424964 ANKRD30BQ9BXX2 1392 aa21.71■■□□□ 1.07
TMEM248-204ENST00000424964 ZFYVE9O95405 1425 aa21.71■■□□□ 1.07
TMEM248-204ENST00000424964 SENP3Q9H4L4 574 aaPredicted RBP21.7■■□□□ 1.06
TMEM248-204ENST00000424964 IQGAP1P46940 1657 aa21.69■■□□□ 1.06
TMEM248-204ENST00000424964 RGL3Q3MIN7 710 aa21.69■■□□□ 1.06
TMEM248-204ENST00000424964 RPGRIP1LQ68CZ1 1315 aa21.64■■□□□ 1.05
TMEM248-204ENST00000424964 PLEKHG1Q9ULL1 1385 aa21.63■■□□□ 1.05
TMEM248-204ENST00000424964 SLC26A8Q96RN1 970 aa21.63■■□□□ 1.05
TMEM248-204ENST00000424964 DHX57Q6P158 1386 aaKnown RBP21.62■■□□□ 1.05
TMEM248-204ENST00000424964 ZNF335Q9H4Z2 1342 aaPredicted RBP21.62■■□□□ 1.05
TMEM248-204ENST00000424964 SPATA31E1Q6ZUB1 1445 aa21.62■■□□□ 1.05
TMEM248-204ENST00000424964 NEXMIFQ5QGS0 1516 aa21.61■■□□□ 1.05
TMEM248-204ENST00000424964 VGFO15240 615 aaPredicted RBP21.61■■□□□ 1.05
TMEM248-204ENST00000424964 PPLO60437 1756 aa21.57■■□□□ 1.04
TMEM248-204ENST00000424964 TBX22Q9Y458 520 aa21.55■■□□□ 1.04
TMEM248-204ENST00000424964 SIN3AQ96ST3 1273 aa21.53■■□□□ 1.04
TMEM248-204ENST00000424964 LTBP4Q8N2S1 1624 aa21.53■■□□□ 1.04
TMEM248-204ENST00000424964 ADAMTS13Q76LX8 1427 aa21.53■■□□□ 1.04
TMEM248-204ENST00000424964 NEUROD1Q13562 356 aa21.52■■□□□ 1.04
TMEM248-204ENST00000424964 CERKQ8TCT0 537 aa21.52■■□□□ 1.04
TMEM248-204ENST00000424964 ADGRF5Q8IZF2 1346 aa21.52■■□□□ 1.03
TMEM248-204ENST00000424964 IFT172Q9UG01 1749 aa21.51■■□□□ 1.03
TMEM248-204ENST00000424964 SETBP1Q9Y6X0 1596 aa21.5■■□□□ 1.03
TMEM248-204ENST00000424964 DCAF11Q8TEB1 546 aa21.5■■□□□ 1.03
TMEM248-204ENST00000424964 KDM2AQ9Y2K7 1162 aa21.5■■□□□ 1.03
TMEM248-204ENST00000424964 DIP2AQ14689 1571 aa21.49■■□□□ 1.03
TMEM248-204ENST00000424964 KCNA6P17658 529 aa21.49■■□□□ 1.03
TMEM248-204ENST00000424964 NRXN3Q9Y4C0 1643 aa21.48■■□□□ 1.03
TMEM248-204ENST00000424964 STRCP1A6NGW2 1772 aa21.48■■□□□ 1.03
TMEM248-204ENST00000424964 CPS1P31327 1500 aa21.47■■□□□ 1.03
TMEM248-204ENST00000424964 CHD2O14647 1828 aaKnown RBP21.45■■□□□ 1.02
TMEM248-204ENST00000424964 PIK3R4Q99570 1358 aa21.45■■□□□ 1.02
TMEM248-204ENST00000424964 STAC3Q96MF2 364 aa21.44■■□□□ 1.02
TMEM248-204ENST00000424964 MYOM2P54296 1465 aa21.44■■□□□ 1.02
TMEM248-204ENST00000424964 ALKQ9UM73 1620 aa21.44■■□□□ 1.02
TMEM248-204ENST00000424964 AMOTL2Q9Y2J4 779 aa21.43■■□□□ 1.02
TMEM248-204ENST00000424964 METP08581 1390 aa21.43■■□□□ 1.02
TMEM248-204ENST00000424964 PROSER2Q86WR7 435 aaPredicted RBP21.42■■□□□ 1.02
TMEM248-204ENST00000424964 PIK3C2GO75747 1445 aa21.41■■□□□ 1.02
TMEM248-204ENST00000424964 NWD1Q149M9 1564 aa21.4■■□□□ 1.02
TMEM248-204ENST00000424964 LRRC7Q96NW7 1537 aa21.39■■□□□ 1.02
TMEM248-204ENST00000424964 PTPRUQ92729 1446 aa21.39■■□□□ 1.02
TMEM248-204ENST00000424964 L3MBTL2Q969R5 705 aa21.39■■□□□ 1.01
TMEM248-204ENST00000424964 NRXN1Q9ULB1 1477 aa21.39■■□□□ 1.01
TMEM248-204ENST00000424964 CFAP70Q5T0N1 1121 aa21.38■■□□□ 1.01
TMEM248-204ENST00000424964 CCER1Q8TC90 406 aaPredicted RBP21.38■■□□□ 1.01
TMEM248-204ENST00000424964 RBM33Q96EV2 1170 aaKnown RBP21.38■■□□□ 1.01
TMEM248-204ENST00000424964 C14orf93Q9H972 538 aaKnown RBP21.38■■□□□ 1.01
TMEM248-204ENST00000424964 SETD1AO15047 1707 aaKnown RBP21.38■■□□□ 1.01
TMEM248-204ENST00000424964 NKTRP30414 1462 aaKnown RBP21.37■■□□□ 1.01
TMEM248-204ENST00000424964 TMEM132EQ6IEE7 984 aa21.36■■□□□ 1.01
TMEM248-204ENST00000424964 IQSEC2Q5JU85 1478 aa21.36■■□□□ 1.01
TMEM248-204ENST00000424964 TMEM94Q12767 1356 aa21.35■■□□□ 1.01
TMEM248-204ENST00000424964 STK26Q9P289 416 aa21.34■■□□□ 1.01
TMEM248-204ENST00000424964 TONSLQ96HA7 1378 aa21.34■■□□□ 1.01
TMEM248-204ENST00000424964 C14orf37Q86TY3 774 aa21.32■■□□□ 1
TMEM248-204ENST00000424964 LAMC1P11047 1609 aa21.32■■□□□ 1
TMEM248-204ENST00000424964 XRN1Q8IZH2 1706 aaKnown RBP21.32■■□□□ 1
TMEM248-204ENST00000424964 CLSPNQ9HAW4 1339 aa21.31■■□□□ 1
TMEM248-204ENST00000424964 UBAP1LF5GYI3 381 aa21.31■■□□□ 1
TMEM248-204ENST00000424964 XIRP1Q702N8 1843 aaKnown RBP21.31■■□□□ 1
TMEM248-204ENST00000424964 FBXO41Q8TF61 875 aa21.3■■□□□ 1
TMEM248-204ENST00000424964 PRAG1Q86YV5 1406 aa21.29■■□□□ 1
TMEM248-204ENST00000424964 LRPPRCP42704 1394 aaKnown RBP21.28■■□□□ 1
TMEM248-204ENST00000424964 ASXL1Q8IXJ9 1541 aa21.28■■□□□ 1
TMEM248-204ENST00000424964 TOM1O60784 492 aa21.27■■□□□ 1
TMEM248-204ENST00000424964 YTHDC2Q9H6S0 1430 aaKnown RBP21.27■■□□□ 1
TMEM248-204ENST00000424964 MSH6P52701 1360 aa21.26■□□□□ 0.99
TMEM248-204ENST00000424964 ROBO2Q9HCK4 1378 aa21.26■□□□□ 0.99
TMEM248-204ENST00000424964 ABCC11Q96J66 1382 aa21.25■□□□□ 0.99
TMEM248-204ENST00000424964 NCOA3Q9Y6Q9 1424 aa21.25■□□□□ 0.99
TMEM248-204ENST00000424964 PTCH1Q13635 1447 aa21.24■□□□□ 0.99
TMEM248-204ENST00000424964 C19orf44Q9H6X5 657 aa21.23■□□□□ 0.99
TMEM248-204ENST00000424964 SCAF1Q9H7N4 1312 aaKnown RBP21.23■□□□□ 0.99
TMEM248-204ENST00000424964 KIAA1210Q9ULL0 1709 aa21.22■□□□□ 0.99
TMEM248-204ENST00000424964 PIP4K2BP78356 416 aa21.22■□□□□ 0.99
TMEM248-204ENST00000424964 NBPF1Q3BBV0 1214 aa21.22■□□□□ 0.99
TMEM248-204ENST00000424964 WAPLQ7Z5K2 1190 aa21.22■□□□□ 0.99
TMEM248-204ENST00000424964 TRAK1Q9UPV9 953 aa21.22■□□□□ 0.99
TMEM248-204ENST00000424964 ADGRB1O14514 1584 aa21.21■□□□□ 0.99
TMEM248-204ENST00000424964 KNDC1Q76NI1 1749 aa21.21■□□□□ 0.99
TMEM248-204ENST00000424964 TECPR2O15040 1411 aa21.21■□□□□ 0.99
TMEM248-204ENST00000424964 ATF3P18847 181 aa21.2■□□□□ 0.98
TMEM248-204ENST00000424964 NBPF8Q3BBV2 869 aa21.2■□□□□ 0.98
TMEM248-204ENST00000424964 ILDR1Q86SU0 546 aaPredicted RBP21.2■□□□□ 0.98
TMEM248-204ENST00000424964 SIRT1Q96EB6 747 aa21.19■□□□□ 0.98
TMEM248-204ENST00000424964 POGKQ9P215 609 aa21.18■□□□□ 0.98
TMEM248-204ENST00000424964 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.18■□□□□ 0.98
TMEM248-204ENST00000424964 CADPS2Q86UW7 1296 aa21.17■□□□□ 0.98
TMEM248-204ENST00000424964 PRAM1Q96QH2 718 aa21.17■□□□□ 0.98
TMEM248-204ENST00000424964 TIMELESSQ9UNS1 1208 aa21.17■□□□□ 0.98
TMEM248-204ENST00000424964 FAM135BQ49AJ0 1406 aa21.16■□□□□ 0.98
TMEM248-204ENST00000424964 ADGRL3Q9HAR2 1447 aa21.16■□□□□ 0.98
TMEM248-204ENST00000424964 PLEKHH1Q9ULM0 1364 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms