RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 PPP1R15AO75807 674 aaPredicted RBP37.18■■■■□ 3.54
TSPAN3-203ENST00000424443 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.18■■■■□ 3.54
TSPAN3-203ENST00000424443 NEURL4Q96JN8 1562 aa37.16■■■■□ 3.54
TSPAN3-203ENST00000424443 NPHP4O75161 1426 aaPredicted RBP37.16■■■■□ 3.54
TSPAN3-203ENST00000424443 MED14O60244 1454 aa37.15■■■■□ 3.54
TSPAN3-203ENST00000424443 ZFYVE9O95405 1425 aa37.13■■■■□ 3.54
TSPAN3-203ENST00000424443 BCANQ96GW7 911 aa37.1■■■■□ 3.53
TSPAN3-203ENST00000424443 IQGAP1P46940 1657 aa37.1■■■■□ 3.53
TSPAN3-203ENST00000424443 NUTM2DQ5VT03 806 aaPredicted RBP37.1■■■■□ 3.53
TSPAN3-203ENST00000424443 RGL3Q3MIN7 710 aa37.08■■■■□ 3.53
TSPAN3-203ENST00000424443 DHX57Q6P158 1386 aaKnown RBP37.07■■■■□ 3.53
TSPAN3-203ENST00000424443 RPGRIP1LQ68CZ1 1315 aa37.06■■■■□ 3.52
TSPAN3-203ENST00000424443 SPATA31E1Q6ZUB1 1445 aa37.02■■■■□ 3.52
TSPAN3-203ENST00000424443 SENP3Q9H4L4 574 aaPredicted RBP37.01■■■■□ 3.52
TSPAN3-203ENST00000424443 PLEKHG1Q9ULL1 1385 aa37.01■■■■□ 3.52
TSPAN3-203ENST00000424443 NEXMIFQ5QGS0 1516 aa37.01■■■■□ 3.51
TSPAN3-203ENST00000424443 VGFO15240 615 aaPredicted RBP36.99■■■■□ 3.51
TSPAN3-203ENST00000424443 SLC26A8Q96RN1 970 aa36.95■■■■□ 3.5
TSPAN3-203ENST00000424443 PPLO60437 1756 aa36.92■■■■□ 3.5
TSPAN3-203ENST00000424443 ZNF335Q9H4Z2 1342 aaPredicted RBP36.9■■■■□ 3.5
TSPAN3-203ENST00000424443 IFT172Q9UG01 1749 aa36.84■■■■□ 3.49
TSPAN3-203ENST00000424443 NEUROD1Q13562 356 aa36.84■■■■□ 3.49
TSPAN3-203ENST00000424443 SIN3AQ96ST3 1273 aa36.84■■■■□ 3.49
TSPAN3-203ENST00000424443 TBX22Q9Y458 520 aa36.84■■■■□ 3.49
TSPAN3-203ENST00000424443 DIP2AQ14689 1571 aa36.82■■■■□ 3.48
TSPAN3-203ENST00000424443 SETBP1Q9Y6X0 1596 aa36.82■■■■□ 3.48
TSPAN3-203ENST00000424443 ADAMTS13Q76LX8 1427 aa36.8■■■■□ 3.48
TSPAN3-203ENST00000424443 DCAF11Q8TEB1 546 aa36.8■■■■□ 3.48
TSPAN3-203ENST00000424443 ADGRF5Q8IZF2 1346 aa36.79■■■■□ 3.48
TSPAN3-203ENST00000424443 KDM2AQ9Y2K7 1162 aa36.77■■■■□ 3.48
TSPAN3-203ENST00000424443 NRXN3Q9Y4C0 1643 aa36.76■■■■□ 3.48
TSPAN3-203ENST00000424443 LTBP4Q8N2S1 1624 aa36.76■■■■□ 3.47
TSPAN3-203ENST00000424443 STAC3Q96MF2 364 aa36.75■■■■□ 3.47
TSPAN3-203ENST00000424443 MYOM2P54296 1465 aa36.74■■■■□ 3.47
TSPAN3-203ENST00000424443 KCNA6P17658 529 aa36.72■■■■□ 3.47
TSPAN3-203ENST00000424443 CPS1P31327 1500 aa36.72■■■■□ 3.47
TSPAN3-203ENST00000424443 PIK3R4Q99570 1358 aa36.71■■■■□ 3.47
TSPAN3-203ENST00000424443 CERKQ8TCT0 537 aa36.69■■■■□ 3.46
TSPAN3-203ENST00000424443 CCER1Q8TC90 406 aaPredicted RBP36.68■■■■□ 3.46
TSPAN3-203ENST00000424443 PIK3C2GO75747 1445 aa36.68■■■■□ 3.46
TSPAN3-203ENST00000424443 ALKQ9UM73 1620 aa36.68■■■■□ 3.46
TSPAN3-203ENST00000424443 STRCP1A6NGW2 1772 aa36.66■■■■□ 3.46
TSPAN3-203ENST00000424443 CHD2O14647 1828 aaKnown RBP36.65■■■■□ 3.46
TSPAN3-203ENST00000424443 NRXN1Q9ULB1 1477 aa36.64■■■■□ 3.46
TSPAN3-203ENST00000424443 METP08581 1390 aa36.64■■■■□ 3.46
TSPAN3-203ENST00000424443 CLSPNQ9HAW4 1339 aa36.63■■■■□ 3.45
TSPAN3-203ENST00000424443 L3MBTL2Q969R5 705 aa36.62■■■■□ 3.45
TSPAN3-203ENST00000424443 NWD1Q149M9 1564 aa36.62■■■■□ 3.45
TSPAN3-203ENST00000424443 AMOTL2Q9Y2J4 779 aa36.61■■■■□ 3.45
TSPAN3-203ENST00000424443 TONSLQ96HA7 1378 aa36.6■■■■□ 3.45
TSPAN3-203ENST00000424443 NKTRP30414 1462 aaKnown RBP36.59■■■■□ 3.45
TSPAN3-203ENST00000424443 PROSER2Q86WR7 435 aaPredicted RBP36.59■■■■□ 3.45
TSPAN3-203ENST00000424443 SETD1AO15047 1707 aaKnown RBP36.58■■■■□ 3.45
TSPAN3-203ENST00000424443 C14orf93Q9H972 538 aaKnown RBP36.58■■■■□ 3.45
TSPAN3-203ENST00000424443 CFAP70Q5T0N1 1121 aa36.56■■■■□ 3.44
TSPAN3-203ENST00000424443 LAMC1P11047 1609 aa36.56■■■■□ 3.44
TSPAN3-203ENST00000424443 PTPRUQ92729 1446 aa36.56■■■■□ 3.44
TSPAN3-203ENST00000424443 LRRC7Q96NW7 1537 aa36.55■■■■□ 3.44
TSPAN3-203ENST00000424443 IQSEC2Q5JU85 1478 aa36.53■■■■□ 3.44
TSPAN3-203ENST00000424443 TMEM132EQ6IEE7 984 aa36.5■■■■□ 3.43
TSPAN3-203ENST00000424443 XRN1Q8IZH2 1706 aaKnown RBP36.48■■■■□ 3.43
TSPAN3-203ENST00000424443 TMEM94Q12767 1356 aa36.48■■■■□ 3.43
TSPAN3-203ENST00000424443 PRAG1Q86YV5 1406 aa36.47■■■■□ 3.43
TSPAN3-203ENST00000424443 RBM33Q96EV2 1170 aaKnown RBP36.46■■■■□ 3.43
TSPAN3-203ENST00000424443 STK26Q9P289 416 aa36.46■■■■□ 3.43
TSPAN3-203ENST00000424443 C14orf37Q86TY3 774 aa36.44■■■■□ 3.42
TSPAN3-203ENST00000424443 ASXL1Q8IXJ9 1541 aa36.43■■■■□ 3.42
TSPAN3-203ENST00000424443 LRPPRCP42704 1394 aaKnown RBP36.42■■■■□ 3.42
TSPAN3-203ENST00000424443 YTHDC2Q9H6S0 1430 aaKnown RBP36.41■■■■□ 3.42
TSPAN3-203ENST00000424443 PTCH1Q13635 1447 aa36.39■■■■□ 3.42
TSPAN3-203ENST00000424443 XIRP1Q702N8 1843 aaKnown RBP36.38■■■■□ 3.41
TSPAN3-203ENST00000424443 NCOA3Q9Y6Q9 1424 aa36.37■■■■□ 3.41
TSPAN3-203ENST00000424443 ABCC11Q96J66 1382 aa36.37■■■■□ 3.41
TSPAN3-203ENST00000424443 KIAA1210Q9ULL0 1709 aa36.37■■■■□ 3.41
TSPAN3-203ENST00000424443 MSH6P52701 1360 aa36.35■■■■□ 3.41
TSPAN3-203ENST00000424443 ROBO2Q9HCK4 1378 aa36.34■■■■□ 3.41
TSPAN3-203ENST00000424443 UBAP1LF5GYI3 381 aa36.34■■■■□ 3.41
TSPAN3-203ENST00000424443 TIMELESSQ9UNS1 1208 aa36.34■■■■□ 3.41
TSPAN3-203ENST00000424443 ADGRB1O14514 1584 aa36.34■■■■□ 3.41
TSPAN3-203ENST00000424443 TOM1O60784 492 aa36.33■■■■□ 3.41
TSPAN3-203ENST00000424443 TECPR2O15040 1411 aa36.33■■■■□ 3.41
TSPAN3-203ENST00000424443 KNDC1Q76NI1 1749 aa36.32■■■■□ 3.41
TSPAN3-203ENST00000424443 FBXO41Q8TF61 875 aa36.3■■■■□ 3.4
TSPAN3-203ENST00000424443 TRAK1Q9UPV9 953 aa36.29■■■■□ 3.4
TSPAN3-203ENST00000424443 NBPF1Q3BBV0 1214 aa36.29■■■■□ 3.4
TSPAN3-203ENST00000424443 C19orf44Q9H6X5 657 aa36.28■■■■□ 3.4
TSPAN3-203ENST00000424443 NBPF8Q3BBV2 869 aa36.26■■■■□ 3.4
TSPAN3-203ENST00000424443 SIRT1Q96EB6 747 aa36.26■■■■□ 3.4
TSPAN3-203ENST00000424443 WAPLQ7Z5K2 1190 aa36.25■■■■□ 3.39
TSPAN3-203ENST00000424443 TRPM1Q7Z4N2 1603 aa36.25■■■■□ 3.39
TSPAN3-203ENST00000424443 FAM135BQ49AJ0 1406 aa36.24■■■■□ 3.39
TSPAN3-203ENST00000424443 ROCK2O75116 1388 aaKnown RBP36.24■■■■□ 3.39
TSPAN3-203ENST00000424443 ATF3P18847 181 aa36.24■■■■□ 3.39
TSPAN3-203ENST00000424443 POGKQ9P215 609 aa36.24■■■■□ 3.39
TSPAN3-203ENST00000424443 DLC1Q96QB1 1528 aa36.22■■■■□ 3.39
TSPAN3-203ENST00000424443 ADGRL3Q9HAR2 1447 aa36.21■■■■□ 3.39
TSPAN3-203ENST00000424443 PRAM1Q96QH2 718 aa36.21■■■■□ 3.39
TSPAN3-203ENST00000424443 SCAF1Q9H7N4 1312 aaKnown RBP36.2■■■■□ 3.39
TSPAN3-203ENST00000424443 CADPS2Q86UW7 1296 aa36.2■■■■□ 3.39
TSPAN3-203ENST00000424443 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.19■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms