RNA–Protein interactions for RNA: ENST00000424254.6

FBXO28-202, Transcript of F-box protein 28, humanhuman

TSL 1 (best) BASIC

Gene FBXO28, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-202ENST00000424254 SENP3Q9H4L4 574 aaPredicted RBP29.49■■■□□ 2.31
FBXO28-202ENST00000424254 PLEKHG1Q9ULL1 1385 aa29.49■■■□□ 2.31
FBXO28-202ENST00000424254 HDGFP51858 240 aaKnown RBP29.48■■■□□ 2.31
FBXO28-202ENST00000424254 MYO5BQ9ULV0 1848 aa29.48■■■□□ 2.31
FBXO28-202ENST00000424254 NUTM2DQ5VT03 806 aaPredicted RBP29.47■■■□□ 2.31
FBXO28-202ENST00000424254 BCANQ96GW7 911 aa29.47■■■□□ 2.31
FBXO28-202ENST00000424254 SPHKAPQ2M3C7 1700 aa29.47■■■□□ 2.31
FBXO28-202ENST00000424254 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.46■■■□□ 2.31
FBXO28-202ENST00000424254 TRPM2O94759 1503 aa29.45■■■□□ 2.31
FBXO28-202ENST00000424254 KCNA6P17658 529 aa29.42■■■□□ 2.3
FBXO28-202ENST00000424254 CLTCL1P53675 1640 aa29.41■■■□□ 2.3
FBXO28-202ENST00000424254 TOM1O60784 492 aa29.4■■■□□ 2.3
FBXO28-202ENST00000424254 FOXD1Q16676 465 aa29.38■■■□□ 2.29
FBXO28-202ENST00000424254 SETD5Q9C0A6 1442 aa29.38■■■□□ 2.29
FBXO28-202ENST00000424254 ZNF326Q5BKZ1 582 aaKnown RBP29.37■■■□□ 2.29
FBXO28-202ENST00000424254 ADAMTS13Q76LX8 1427 aa29.37■■■□□ 2.29
FBXO28-202ENST00000424254 PIP4K2BP78356 416 aa29.36■■■□□ 2.29
FBXO28-202ENST00000424254 TBX22Q9Y458 520 aa29.36■■■□□ 2.29
FBXO28-202ENST00000424254 ALKQ9UM73 1620 aa29.35■■■□□ 2.29
FBXO28-202ENST00000424254 MPHOSPH9Q99550 1183 aa29.34■■■□□ 2.29
FBXO28-202ENST00000424254 SCAF1Q9H7N4 1312 aaKnown RBP29.33■■■□□ 2.29
FBXO28-202ENST00000424254 NWD1Q149M9 1564 aa29.32■■■□□ 2.28
FBXO28-202ENST00000424254 TMEM94Q12767 1356 aa29.32■■■□□ 2.28
FBXO28-202ENST00000424254 RBM33Q96EV2 1170 aaKnown RBP29.3■■■□□ 2.28
FBXO28-202ENST00000424254 NKTRP30414 1462 aaKnown RBP29.3■■■□□ 2.28
FBXO28-202ENST00000424254 RAB3GAP2Q9H2M9 1393 aa29.29■■■□□ 2.28
FBXO28-202ENST00000424254 PROSER2Q86WR7 435 aaPredicted RBP29.29■■■□□ 2.28
FBXO28-202ENST00000424254 NEXMIFQ5QGS0 1516 aa29.28■■■□□ 2.28
FBXO28-202ENST00000424254 DIP2AQ14689 1571 aa29.27■■■□□ 2.28
FBXO28-202ENST00000424254 ACIN1Q9UKV3 1341 aaKnown RBP29.25■■■□□ 2.27
FBXO28-202ENST00000424254 PIK3R4Q99570 1358 aa29.23■■■□□ 2.27
FBXO28-202ENST00000424254 XIRP1Q702N8 1843 aaKnown RBP29.23■■■□□ 2.27
FBXO28-202ENST00000424254 SETBP1Q9Y6X0 1596 aa29.23■■■□□ 2.27
FBXO28-202ENST00000424254 HSPA1LP34931 641 aa29.21■■■□□ 2.27
FBXO28-202ENST00000424254 CCDC144AA2RUR9 1427 aa29.21■■■□□ 2.27
FBXO28-202ENST00000424254 NRXN3Q9Y4C0 1643 aa29.21■■■□□ 2.27
FBXO28-202ENST00000424254 KIF1BO60333 1816 aa29.2■■■□□ 2.26
FBXO28-202ENST00000424254 PTPRUQ92729 1446 aa29.2■■■□□ 2.26
FBXO28-202ENST00000424254 CHD2O14647 1828 aaKnown RBP29.18■■■□□ 2.26
FBXO28-202ENST00000424254 RPGRIP1LQ68CZ1 1315 aa29.17■■■□□ 2.26
FBXO28-202ENST00000424254 AMOTL2Q9Y2J4 779 aa29.17■■■□□ 2.26
FBXO28-202ENST00000424254 METP08581 1390 aa29.16■■■□□ 2.26
FBXO28-202ENST00000424254 VGFO15240 615 aaPredicted RBP29.15■■■□□ 2.26
FBXO28-202ENST00000424254 MSH6P52701 1360 aa29.13■■■□□ 2.25
FBXO28-202ENST00000424254 SPATA31E1Q6ZUB1 1445 aa29.13■■■□□ 2.25
FBXO28-202ENST00000424254 NCOA3Q9Y6Q9 1424 aa29.1■■■□□ 2.25
FBXO28-202ENST00000424254 RGL3Q3MIN7 710 aa29.1■■■□□ 2.25
FBXO28-202ENST00000424254 HRCP23327 699 aa29.08■■■□□ 2.25
FBXO28-202ENST00000424254 C14orf37Q86TY3 774 aa29.06■■■□□ 2.24
FBXO28-202ENST00000424254 FAM135BQ49AJ0 1406 aa29.06■■■□□ 2.24
FBXO28-202ENST00000424254 XRN1Q8IZH2 1706 aaKnown RBP29.05■■■□□ 2.24
FBXO28-202ENST00000424254 ADGRF5Q8IZF2 1346 aa29.04■■■□□ 2.24
FBXO28-202ENST00000424254 PPLO60437 1756 aa29.03■■■□□ 2.24
FBXO28-202ENST00000424254 DISP3Q9P2K9 1392 aa29.03■■■□□ 2.24
FBXO28-202ENST00000424254 C19orf44Q9H6X5 657 aa29.01■■■□□ 2.23
FBXO28-202ENST00000424254 SLAIN2Q9P270 581 aa29.01■■■□□ 2.23
FBXO28-202ENST00000424254 ANKRD30BQ9BXX2 1392 aa29.01■■■□□ 2.23
FBXO28-202ENST00000424254 SETD1AO15047 1707 aaKnown RBP28.97■■■□□ 2.23
FBXO28-202ENST00000424254 CADPS2Q86UW7 1296 aa28.96■■■□□ 2.23
FBXO28-202ENST00000424254 ATF3P18847 181 aa28.94■■■□□ 2.22
FBXO28-202ENST00000424254 ROBO1Q9Y6N7 1651 aa28.94■■■□□ 2.22
FBXO28-202ENST00000424254 ROBO2Q9HCK4 1378 aa28.93■■■□□ 2.22
FBXO28-202ENST00000424254 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.93■■■□□ 2.22
FBXO28-202ENST00000424254 PTCH1Q13635 1447 aa28.92■■■□□ 2.22
FBXO28-202ENST00000424254 IFT172Q9UG01 1749 aa28.91■■■□□ 2.22
FBXO28-202ENST00000424254 PIK3C2GO75747 1445 aa28.91■■■□□ 2.22
FBXO28-202ENST00000424254 DCCP43146 1447 aa28.9■■■□□ 2.22
FBXO28-202ENST00000424254 PRAG1Q86YV5 1406 aa28.9■■■□□ 2.22
FBXO28-202ENST00000424254 ADGRL3Q9HAR2 1447 aa28.89■■■□□ 2.21
FBXO28-202ENST00000424254 MED1Q15648 1581 aaPredicted RBP28.86■■■□□ 2.21
FBXO28-202ENST00000424254 MYOM2P54296 1465 aa28.85■■■□□ 2.21
FBXO28-202ENST00000424254 NRXN1Q9ULB1 1477 aa28.85■■■□□ 2.21
FBXO28-202ENST00000424254 ASXL1Q8IXJ9 1541 aa28.84■■■□□ 2.21
FBXO28-202ENST00000424254 TMEM132EQ6IEE7 984 aa28.83■■■□□ 2.21
FBXO28-202ENST00000424254 MST1RQ04912 1400 aa28.83■■■□□ 2.21
FBXO28-202ENST00000424254 LRPPRCP42704 1394 aaKnown RBP28.81■■■□□ 2.2
FBXO28-202ENST00000424254 BRINP3Q76B58 766 aa28.81■■■□□ 2.2
FBXO28-202ENST00000424254 C14orf93Q9H972 538 aaKnown RBP28.81■■■□□ 2.2
FBXO28-202ENST00000424254 STK26Q9P289 416 aa28.81■■■□□ 2.2
FBXO28-202ENST00000424254 ILDR2Q71H61 639 aa28.8■■■□□ 2.2
FBXO28-202ENST00000424254 NALCNQ8IZF0 1738 aa28.8■■■□□ 2.2
FBXO28-202ENST00000424254 TECPR2O15040 1411 aa28.79■■■□□ 2.2
FBXO28-202ENST00000424254 CFAP70Q5T0N1 1121 aa28.79■■■□□ 2.2
FBXO28-202ENST00000424254 ABCC11Q96J66 1382 aa28.78■■■□□ 2.2
FBXO28-202ENST00000424254 DCAF11Q8TEB1 546 aa28.75■■■□□ 2.19
FBXO28-202ENST00000424254 YTHDC2Q9H6S0 1430 aaKnown RBP28.75■■■□□ 2.19
FBXO28-202ENST00000424254 WAPLQ7Z5K2 1190 aa28.74■■■□□ 2.19
FBXO28-202ENST00000424254 KDM2AQ9Y2K7 1162 aa28.74■■■□□ 2.19
FBXO28-202ENST00000424254 PHLPP1O60346 1717 aa28.73■■■□□ 2.19
FBXO28-202ENST00000424254 DHX57Q6P158 1386 aaKnown RBP28.73■■■□□ 2.19
FBXO28-202ENST00000424254 AHDC1Q5TGY3 1603 aaPredicted RBP28.73■■■□□ 2.19
FBXO28-202ENST00000424254 PLEKHH1Q9ULM0 1364 aa28.71■■■□□ 2.19
FBXO28-202ENST00000424254 C1orf167Q5SNV9 1468 aa28.71■■■□□ 2.19
FBXO28-202ENST00000424254 COL16A1Q07092 1604 aaPredicted RBP28.71■■■□□ 2.19
FBXO28-202ENST00000424254 JCADQ9P266 1359 aa28.7■■■□□ 2.18
FBXO28-202ENST00000424254 PHF23Q9BUL5 403 aaPredicted RBP28.68■■■□□ 2.18
FBXO28-202ENST00000424254 LAMC1P11047 1609 aa28.67■■■□□ 2.18
FBXO28-202ENST00000424254 STAC3Q96MF2 364 aa28.66■■■□□ 2.18
FBXO28-202ENST00000424254 KNDC1Q76NI1 1749 aa28.66■■■□□ 2.18
FBXO28-202ENST00000424254 DDX17Q92841 729 aaKnown RBP28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms