RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 KDM5AP29375 1690 aaKnown RBP24.8■■□□□ 1.56
FOXN4-203ENST00000423960 LTKP29376 864 aa24.79■■□□□ 1.56
FOXN4-203ENST00000423960 TXNDC2Q86VQ3 553 aa24.79■■□□□ 1.56
FOXN4-203ENST00000423960 IQSEC2Q5JU85 1478 aa24.77■■□□□ 1.56
FOXN4-203ENST00000423960 RGL3Q3MIN7 710 aa24.76■■□□□ 1.55
FOXN4-203ENST00000423960 SCAF11Q99590 1463 aaKnown RBP24.76■■□□□ 1.55
FOXN4-203ENST00000423960 ARHGAP23Q9P227 1491 aa24.76■■□□□ 1.55
FOXN4-203ENST00000423960 SLIT1O75093 1534 aa24.76■■□□□ 1.55
FOXN4-203ENST00000423960 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.75■■□□□ 1.55
FOXN4-203ENST00000423960 RIMS2Q9UQ26 1411 aa24.74■■□□□ 1.55
FOXN4-203ENST00000423960 KIF1BO60333 1816 aa24.73■■□□□ 1.55
FOXN4-203ENST00000423960 IQGAP1P46940 1657 aa24.73■■□□□ 1.55
FOXN4-203ENST00000423960 RPGRIP1LQ68CZ1 1315 aa24.73■■□□□ 1.55
FOXN4-203ENST00000423960 SPATA31E1Q6ZUB1 1445 aa24.72■■□□□ 1.55
FOXN4-203ENST00000423960 UBAP1LF5GYI3 381 aa24.72■■□□□ 1.55
FOXN4-203ENST00000423960 SIN3AQ96ST3 1273 aa24.72■■□□□ 1.55
FOXN4-203ENST00000423960 PPP1R15AO75807 674 aaPredicted RBP24.71■■□□□ 1.55
FOXN4-203ENST00000423960 NUTM2DQ5VT03 806 aaPredicted RBP24.71■■□□□ 1.55
FOXN4-203ENST00000423960 ZFYVE9O95405 1425 aa24.7■■□□□ 1.55
FOXN4-203ENST00000423960 NEUROD1Q13562 356 aa24.7■■□□□ 1.54
FOXN4-203ENST00000423960 MYO5BQ9ULV0 1848 aa24.7■■□□□ 1.54
FOXN4-203ENST00000423960 CPS1P31327 1500 aa24.69■■□□□ 1.54
FOXN4-203ENST00000423960 CCER1Q8TC90 406 aaPredicted RBP24.67■■□□□ 1.54
FOXN4-203ENST00000423960 VGFO15240 615 aaPredicted RBP24.66■■□□□ 1.54
FOXN4-203ENST00000423960 BCANQ96GW7 911 aa24.65■■□□□ 1.54
FOXN4-203ENST00000423960 SENP3Q9H4L4 574 aaPredicted RBP24.64■■□□□ 1.54
FOXN4-203ENST00000423960 CLSPNQ9HAW4 1339 aa24.62■■□□□ 1.53
FOXN4-203ENST00000423960 NEXMIFQ5QGS0 1516 aa24.62■■□□□ 1.53
FOXN4-203ENST00000423960 PLEKHG1Q9ULL1 1385 aa24.62■■□□□ 1.53
FOXN4-203ENST00000423960 DCAF11Q8TEB1 546 aa24.6■■□□□ 1.53
FOXN4-203ENST00000423960 SLC26A8Q96RN1 970 aa24.6■■□□□ 1.53
FOXN4-203ENST00000423960 SCAF1Q9H7N4 1312 aaKnown RBP24.59■■□□□ 1.53
FOXN4-203ENST00000423960 PIP4K2BP78356 416 aa24.58■■□□□ 1.53
FOXN4-203ENST00000423960 STAC3Q96MF2 364 aa24.58■■□□□ 1.53
FOXN4-203ENST00000423960 KDM2AQ9Y2K7 1162 aa24.58■■□□□ 1.53
FOXN4-203ENST00000423960 LRRC7Q96NW7 1537 aa24.57■■□□□ 1.52
FOXN4-203ENST00000423960 ADGRF5Q8IZF2 1346 aa24.57■■□□□ 1.52
FOXN4-203ENST00000423960 STRCP1A6NGW2 1772 aa24.57■■□□□ 1.52
FOXN4-203ENST00000423960 TOM1O60784 492 aa24.56■■□□□ 1.52
FOXN4-203ENST00000423960 L3MBTL2Q969R5 705 aa24.55■■□□□ 1.52
FOXN4-203ENST00000423960 TBX22Q9Y458 520 aa24.54■■□□□ 1.52
FOXN4-203ENST00000423960 PPLO60437 1756 aa24.53■■□□□ 1.52
FOXN4-203ENST00000423960 KCNA6P17658 529 aa24.49■■□□□ 1.51
FOXN4-203ENST00000423960 TONSLQ96HA7 1378 aa24.49■■□□□ 1.51
FOXN4-203ENST00000423960 ADAMTS13Q76LX8 1427 aa24.49■■□□□ 1.51
FOXN4-203ENST00000423960 MYOM2P54296 1465 aa24.49■■□□□ 1.51
FOXN4-203ENST00000423960 IFT172Q9UG01 1749 aa24.48■■□□□ 1.51
FOXN4-203ENST00000423960 SETBP1Q9Y6X0 1596 aa24.47■■□□□ 1.51
FOXN4-203ENST00000423960 RBM33Q96EV2 1170 aaKnown RBP24.46■■□□□ 1.51
FOXN4-203ENST00000423960 HSPA1LP34931 641 aa24.45■■□□□ 1.5
FOXN4-203ENST00000423960 NRXN1Q9ULB1 1477 aa24.45■■□□□ 1.5
FOXN4-203ENST00000423960 PIK3C2GO75747 1445 aa24.44■■□□□ 1.5
FOXN4-203ENST00000423960 ALKQ9UM73 1620 aa24.44■■□□□ 1.5
FOXN4-203ENST00000423960 C14orf93Q9H972 538 aaKnown RBP24.44■■□□□ 1.5
FOXN4-203ENST00000423960 PROSER2Q86WR7 435 aaPredicted RBP24.43■■□□□ 1.5
FOXN4-203ENST00000423960 TIMELESSQ9UNS1 1208 aa24.43■■□□□ 1.5
FOXN4-203ENST00000423960 TMEM94Q12767 1356 aa24.42■■□□□ 1.5
FOXN4-203ENST00000423960 CFAP70Q5T0N1 1121 aa24.42■■□□□ 1.5
FOXN4-203ENST00000423960 NRXN3Q9Y4C0 1643 aa24.42■■□□□ 1.5
FOXN4-203ENST00000423960 DIP2AQ14689 1571 aa24.42■■□□□ 1.5
FOXN4-203ENST00000423960 METP08581 1390 aa24.41■■□□□ 1.5
FOXN4-203ENST00000423960 PIK3R4Q99570 1358 aa24.41■■□□□ 1.5
FOXN4-203ENST00000423960 DISP3Q9P2K9 1392 aa24.4■■□□□ 1.5
FOXN4-203ENST00000423960 AMOTL2Q9Y2J4 779 aa24.37■■□□□ 1.49
FOXN4-203ENST00000423960 PRAG1Q86YV5 1406 aa24.36■■□□□ 1.49
FOXN4-203ENST00000423960 TMEM132EQ6IEE7 984 aa24.36■■□□□ 1.49
FOXN4-203ENST00000423960 NWD1Q149M9 1564 aa24.35■■□□□ 1.49
FOXN4-203ENST00000423960 NKTRP30414 1462 aaKnown RBP24.34■■□□□ 1.49
FOXN4-203ENST00000423960 PTPRUQ92729 1446 aa24.34■■□□□ 1.49
FOXN4-203ENST00000423960 XIRP1Q702N8 1843 aaKnown RBP24.33■■□□□ 1.49
FOXN4-203ENST00000423960 NBPF8Q3BBV2 869 aa24.32■■□□□ 1.48
FOXN4-203ENST00000423960 STK26Q9P289 416 aa24.3■■□□□ 1.48
FOXN4-203ENST00000423960 NBPF1Q3BBV0 1214 aa24.29■■□□□ 1.48
FOXN4-203ENST00000423960 SETD1AO15047 1707 aaKnown RBP24.29■■□□□ 1.48
FOXN4-203ENST00000423960 CHD2O14647 1828 aaKnown RBP24.28■■□□□ 1.48
FOXN4-203ENST00000423960 LAMC1P11047 1609 aa24.28■■□□□ 1.48
FOXN4-203ENST00000423960 LRPPRCP42704 1394 aaKnown RBP24.28■■□□□ 1.48
FOXN4-203ENST00000423960 MSH6P52701 1360 aa24.27■■□□□ 1.48
FOXN4-203ENST00000423960 C14orf37Q86TY3 774 aa24.26■■□□□ 1.47
FOXN4-203ENST00000423960 ABCC11Q96J66 1382 aa24.26■■□□□ 1.47
FOXN4-203ENST00000423960 YTHDC2Q9H6S0 1430 aaKnown RBP24.26■■□□□ 1.47
FOXN4-203ENST00000423960 ASXL1Q8IXJ9 1541 aa24.25■■□□□ 1.47
FOXN4-203ENST00000423960 ADGRB1O14514 1584 aa24.22■■□□□ 1.47
FOXN4-203ENST00000423960 ILDR2Q71H61 639 aa24.22■■□□□ 1.47
FOXN4-203ENST00000423960 SIRT1Q96EB6 747 aa24.22■■□□□ 1.47
FOXN4-203ENST00000423960 TRAK1Q9UPV9 953 aa24.22■■□□□ 1.47
FOXN4-203ENST00000423960 KIAA1210Q9ULL0 1709 aa24.21■■□□□ 1.47
FOXN4-203ENST00000423960 FAM135BQ49AJ0 1406 aa24.21■■□□□ 1.47
FOXN4-203ENST00000423960 ROCK2O75116 1388 aaKnown RBP24.21■■□□□ 1.47
FOXN4-203ENST00000423960 ROBO2Q9HCK4 1378 aa24.2■■□□□ 1.46
FOXN4-203ENST00000423960 SLAIN2Q9P270 581 aa24.2■■□□□ 1.46
FOXN4-203ENST00000423960 XRN1Q8IZH2 1706 aaKnown RBP24.2■■□□□ 1.46
FOXN4-203ENST00000423960 TECPR2O15040 1411 aa24.18■■□□□ 1.46
FOXN4-203ENST00000423960 PTCH1Q13635 1447 aa24.18■■□□□ 1.46
FOXN4-203ENST00000423960 WAPLQ7Z5K2 1190 aa24.18■■□□□ 1.46
FOXN4-203ENST00000423960 NCOA3Q9Y6Q9 1424 aa24.17■■□□□ 1.46
FOXN4-203ENST00000423960 TRPM1Q7Z4N2 1603 aa24.17■■□□□ 1.46
FOXN4-203ENST00000423960 CARD11Q9BXL7 1154 aa24.16■■□□□ 1.46
FOXN4-203ENST00000423960 POGKQ9P215 609 aa24.16■■□□□ 1.46
FOXN4-203ENST00000423960 PRAM1Q96QH2 718 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms