RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 FRAT2O75474 233 aaPredicted RBP10.65□□□□□ -0.7
CHD7-201ENST00000423902 NLRP2Q9NX02 1062 aa10.65□□□□□ -0.7
CHD7-201ENST00000423902 UGGT2Q9NYU1 1516 aa10.65□□□□□ -0.7
CHD7-201ENST00000423902 STRN4Q9NRL3 753 aa10.65□□□□□ -0.7
CHD7-201ENST00000423902 ANKRD30BQ9BXX2 1392 aa10.65□□□□□ -0.71
CHD7-201ENST00000423902 DAPK1P53355 1430 aa10.64□□□□□ -0.71
CHD7-201ENST00000423902 NLRP13Q86W25 1043 aa10.64□□□□□ -0.71
CHD7-201ENST00000423902 ROCK1Q13464 1354 aa10.64□□□□□ -0.71
CHD7-201ENST00000423902 PDE3BQ13370 1112 aa10.64□□□□□ -0.71
CHD7-201ENST00000423902 FKBP8Q14318 412 aa10.64□□□□□ -0.71
CHD7-201ENST00000423902 HSP90B1P14625 803 aaKnown RBP10.64□□□□□ -0.71
CHD7-201ENST00000423902 ERBINQ96RT1 1412 aa10.64□□□□□ -0.71
CHD7-201ENST00000423902 USP47Q96K76 1375 aa10.63□□□□□ -0.71
CHD7-201ENST00000423902 ST20-MTHFSA0A0A6YYL1 179 aa10.63□□□□□ -0.71
CHD7-201ENST00000423902 NEXNQ0ZGT2 675 aa10.63□□□□□ -0.71
CHD7-201ENST00000423902 ABCC2Q92887 1545 aa10.63□□□□□ -0.71
CHD7-201ENST00000423902 ZNF692Q9BU19 519 aaPredicted RBP10.62□□□□□ -0.71
CHD7-201ENST00000423902 MSH6P52701 1360 aa10.62□□□□□ -0.71
CHD7-201ENST00000423902 BECN1Q14457 450 aa10.62□□□□□ -0.71
CHD7-201ENST00000423902 SLC26A8Q96RN1 970 aa10.61□□□□□ -0.71
CHD7-201ENST00000423902 PRDM11Q9NQV5 511 aa10.61□□□□□ -0.71
CHD7-201ENST00000423902 CNTLNQ9NXG0 1405 aa10.61□□□□□ -0.71
CHD7-201ENST00000423902 MCCP23508 829 aa10.61□□□□□ -0.71
CHD7-201ENST00000423902 USP35Q9P2H5 1018 aa10.61□□□□□ -0.71
CHD7-201ENST00000423902 UBAP1LF5GYI3 381 aa10.61□□□□□ -0.71
CHD7-201ENST00000423902 CADPS2Q86UW7 1296 aa10.61□□□□□ -0.71
CHD7-201ENST00000423902 CEP170Q5SW79 1584 aa10.6□□□□□ -0.71
CHD7-201ENST00000423902 NCLP19338 710 aaKnown RBP10.6□□□□□ -0.71
CHD7-201ENST00000423902 ZRSR1Q15695 479 aaKnown RBP10.6□□□□□ -0.71
CHD7-201ENST00000423902 TNRQ92752 1358 aa10.6□□□□□ -0.71
CHD7-201ENST00000423902 DDX58O95786 925 aaKnown RBP10.6□□□□□ -0.71
CHD7-201ENST00000423902 NOL10Q9BSC4 688 aaKnown RBP10.6□□□□□ -0.71
CHD7-201ENST00000423902 PRAM1Q96QH2 718 aa10.6□□□□□ -0.71
CHD7-201ENST00000423902 TOM1L2Q6ZVM7 507 aa10.6□□□□□ -0.71
CHD7-201ENST00000423902 PANK3Q9H999 370 aa10.6□□□□□ -0.71
CHD7-201ENST00000423902 ANO8Q9HCE9 1232 aaPredicted RBP10.6□□□□□ -0.71
CHD7-201ENST00000423902 RTEL1-TNFRSF6BF6WH68 1400 aa10.6□□□□□ -0.71
CHD7-201ENST00000423902 KIAA1107Q9UPP5 1409 aa10.6□□□□□ -0.71
CHD7-201ENST00000423902 HMMRO75330 724 aa10.59□□□□□ -0.71
CHD7-201ENST00000423902 KIAA1211Q6ZU35 1233 aa10.59□□□□□ -0.71
CHD7-201ENST00000423902 DDRGK1Q96HY6 314 aa10.59□□□□□ -0.71
CHD7-201ENST00000423902 ABCC10Q5T3U5 1492 aa10.59□□□□□ -0.71
CHD7-201ENST00000423902 TRIM34Q9BYJ4 488 aa10.59□□□□□ -0.71
CHD7-201ENST00000423902 TATP17735 454 aaPredicted RBP10.58□□□□□ -0.72
CHD7-201ENST00000423902 MAP3K1Q13233 1512 aa10.58□□□□□ -0.72
CHD7-201ENST00000423902 DUOX2Q9NRD8 1548 aa10.58□□□□□ -0.72
CHD7-201ENST00000423902 NAP1L2Q9ULW6 460 aaPredicted RBP10.58□□□□□ -0.72
CHD7-201ENST00000423902 TMEM132EQ6IEE7 984 aa10.58□□□□□ -0.72
CHD7-201ENST00000423902 PMFBP1Q8TBY8 1022 aa10.58□□□□□ -0.72
CHD7-201ENST00000423902 NGLY1Q96IV0 654 aa10.58□□□□□ -0.72
CHD7-201ENST00000423902 PLEKHO1Q53GL0 409 aaPredicted RBP10.58□□□□□ -0.72
CHD7-201ENST00000423902 KIF1BO60333 1816 aa10.58□□□□□ -0.72
CHD7-201ENST00000423902 DIAPH1O60610 1272 aaKnown RBP10.58□□□□□ -0.72
CHD7-201ENST00000423902 PLCH2O75038 1416 aa10.57□□□□□ -0.72
CHD7-201ENST00000423902 KDM5BQ9UGL1 1544 aa10.57□□□□□ -0.72
CHD7-201ENST00000423902 NUTM2GQ5VZR2 741 aa10.57□□□□□ -0.72
CHD7-201ENST00000423902 TARBP1Q13395 1621 aaKnown RBP10.57□□□□□ -0.72
CHD7-201ENST00000423902 HSP90AB1P08238 724 aaKnown RBP10.56□□□□□ -0.72
CHD7-201ENST00000423902 KCNH5Q8NCM2 988 aa10.56□□□□□ -0.72
CHD7-201ENST00000423902 CDK19Q9BWU1 502 aa10.56□□□□□ -0.72
CHD7-201ENST00000423902 CABP2Q9NPB3 220 aa10.56□□□□□ -0.72
CHD7-201ENST00000423902 RBM33Q96EV2 1170 aaKnown RBP10.56□□□□□ -0.72
CHD7-201ENST00000423902 GTF3C3Q9Y5Q9 886 aa10.56□□□□□ -0.72
CHD7-201ENST00000423902 A2MP01023 1474 aa10.56□□□□□ -0.72
CHD7-201ENST00000423902 LRRFIP1Q32MZ4 808 aaKnown RBP10.56□□□□□ -0.72
CHD7-201ENST00000423902 VPS37DQ86XT2 251 aa10.56□□□□□ -0.72
CHD7-201ENST00000423902 AMOTL1Q8IY63 956 aa10.55□□□□□ -0.72
CHD7-201ENST00000423902 CCER2I3L3R5 266 aa10.55□□□□□ -0.72
CHD7-201ENST00000423902 ADGBQ8N7X0 1667 aa10.55□□□□□ -0.72
CHD7-201ENST00000423902 ATP10BO94823 1461 aa10.55□□□□□ -0.72
CHD7-201ENST00000423902 PPP1R1BQ9UD71 204 aaPredicted RBP10.55□□□□□ -0.72
CHD7-201ENST00000423902 KIF6Q6ZMV9 814 aa10.55□□□□□ -0.72
CHD7-201ENST00000423902 TULP1O00294 542 aaPredicted RBP10.54□□□□□ -0.72
CHD7-201ENST00000423902 SPG7Q9UQ90 795 aa10.54□□□□□ -0.72
CHD7-201ENST00000423902 MIER1Q8N108 512 aa10.54□□□□□ -0.72
CHD7-201ENST00000423902 UHRF1BP1Q6BDS2 1440 aa10.54□□□□□ -0.72
CHD7-201ENST00000423902 SLC4A10Q6U841 1118 aa10.54□□□□□ -0.72
CHD7-201ENST00000423902 SMC4Q9NTJ3 1288 aa10.54□□□□□ -0.72
CHD7-201ENST00000423902 GAS2L2Q8NHY3 880 aa10.54□□□□□ -0.72
CHD7-201ENST00000423902 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.54□□□□□ -0.721e-6■■■■■ 36.3
CHD7-201ENST00000423902 GOLGA6L22H0YM25 854 aa10.53□□□□□ -0.72
CHD7-201ENST00000423902 CEBPAP49715 358 aaPredicted RBP10.53□□□□□ -0.72
CHD7-201ENST00000423902 NUP160Q12769 1436 aa10.53□□□□□ -0.72
CHD7-201ENST00000423902 SYCP2Q9BX26 1530 aa10.53□□□□□ -0.72
CHD7-201ENST00000423902 CFAP43Q8NDM7 1665 aa10.53□□□□□ -0.72
CHD7-201ENST00000423902 UHRF1BP1LA0JNW5 1464 aa10.53□□□□□ -0.72
CHD7-201ENST00000423902 ITPRIPQ8IWB1 547 aa10.53□□□□□ -0.72
CHD7-201ENST00000423902 ATAD2Q6PL18 1390 aa10.53□□□□□ -0.72
CHD7-201ENST00000423902 MYBBP1AQ9BQG0 1328 aaKnown RBP10.52□□□□□ -0.72
CHD7-201ENST00000423902 LMTK3Q96Q04 1460 aa10.52□□□□□ -0.72
CHD7-201ENST00000423902 NGEFQ8N5V2 710 aa10.52□□□□□ -0.73
CHD7-201ENST00000423902 C9orf78Q9NZ63 289 aaPredicted RBP10.52□□□□□ -0.73
CHD7-201ENST00000423902 CFAP70Q5T0N1 1121 aa10.51□□□□□ -0.73
CHD7-201ENST00000423902 DHX29Q7Z478 1369 aaKnown RBP10.51□□□□□ -0.73
CHD7-201ENST00000423902 SENP3-EIF4A1A0A087X0R7 540 aa10.51□□□□□ -0.73
CHD7-201ENST00000423902 ADAMTS2O95450 1211 aa10.5□□□□□ -0.73
CHD7-201ENST00000423902 CCDC61Q9Y6R9 512 aa10.5□□□□□ -0.73
CHD7-201ENST00000423902 GNL2Q13823 731 aaKnown RBP10.5□□□□□ -0.73
CHD7-201ENST00000423902 AMOTL2Q9Y2J4 779 aa10.5□□□□□ -0.73
CHD7-201ENST00000423902 ATP10AO60312 1499 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms