RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 NWD1Q149M9 1564 aa25.5■■□□□ 1.67
CCDC78-203ENST00000423653 NKTRP30414 1462 aaKnown RBP25.49■■□□□ 1.67
CCDC78-203ENST00000423653 PLEKHG1Q9ULL1 1385 aa25.49■■□□□ 1.67
CCDC78-203ENST00000423653 PPP1R15AO75807 674 aaPredicted RBP25.49■■□□□ 1.67
CCDC78-203ENST00000423653 XIRP1Q702N8 1843 aaKnown RBP25.49■■□□□ 1.67
CCDC78-203ENST00000423653 SPHKAPQ2M3C7 1700 aa25.48■■□□□ 1.67
CCDC78-203ENST00000423653 HSPA1LP34931 641 aa25.46■■□□□ 1.67
CCDC78-203ENST00000423653 BCANQ96GW7 911 aa25.46■■□□□ 1.67
CCDC78-203ENST00000423653 SLC26A8Q96RN1 970 aa25.46■■□□□ 1.67
CCDC78-203ENST00000423653 CHGAP10645 457 aaKnown RBP25.45■■□□□ 1.66
CCDC78-203ENST00000423653 KCNA6P17658 529 aa25.45■■□□□ 1.66
CCDC78-203ENST00000423653 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.45■■□□□ 1.66
CCDC78-203ENST00000423653 NAIPQ13075 1403 aa25.44■■□□□ 1.66
CCDC78-203ENST00000423653 DIP2AQ14689 1571 aa25.44■■□□□ 1.66
CCDC78-203ENST00000423653 TMEM94Q12767 1356 aa25.42■■□□□ 1.66
CCDC78-203ENST00000423653 HFM1A2PYH4 1435 aa25.4■■□□□ 1.66
CCDC78-203ENST00000423653 CHD2O14647 1828 aaKnown RBP25.37■■□□□ 1.65
CCDC78-203ENST00000423653 MED1Q15648 1581 aaPredicted RBP25.37■■□□□ 1.65
CCDC78-203ENST00000423653 PROSER2Q86WR7 435 aaPredicted RBP25.37■■□□□ 1.65
CCDC78-203ENST00000423653 TRPM2O94759 1503 aa25.37■■□□□ 1.65
CCDC78-203ENST00000423653 SENP3Q9H4L4 574 aaPredicted RBP25.33■■□□□ 1.65
CCDC78-203ENST00000423653 TBX22Q9Y458 520 aa25.33■■□□□ 1.65
CCDC78-203ENST00000423653 MSH6P52701 1360 aa25.32■■□□□ 1.64
CCDC78-203ENST00000423653 PIK3R4Q99570 1358 aa25.32■■□□□ 1.64
CCDC78-203ENST00000423653 ADAMTS13Q76LX8 1427 aa25.32■■□□□ 1.64
CCDC78-203ENST00000423653 CLTCL1P53675 1640 aa25.32■■□□□ 1.64
CCDC78-203ENST00000423653 ILDR2Q71H61 639 aa25.3■■□□□ 1.64
CCDC78-203ENST00000423653 FAM135BQ49AJ0 1406 aa25.29■■□□□ 1.64
CCDC78-203ENST00000423653 NUTM2DQ5VT03 806 aaPredicted RBP25.29■■□□□ 1.64
CCDC78-203ENST00000423653 SETBP1Q9Y6X0 1596 aa25.28■■□□□ 1.64
CCDC78-203ENST00000423653 KIF1BO60333 1816 aa25.28■■□□□ 1.64
CCDC78-203ENST00000423653 ROBO1Q9Y6N7 1651 aa25.27■■□□□ 1.64
CCDC78-203ENST00000423653 NCOA3Q9Y6Q9 1424 aa25.27■■□□□ 1.64
CCDC78-203ENST00000423653 ZNF326Q5BKZ1 582 aaKnown RBP25.26■■□□□ 1.63
CCDC78-203ENST00000423653 TRIM52Q96A61 297 aa25.26■■□□□ 1.63
CCDC78-203ENST00000423653 NRXN3Q9Y4C0 1643 aa25.24■■□□□ 1.63
CCDC78-203ENST00000423653 RBM33Q96EV2 1170 aaKnown RBP25.24■■□□□ 1.63
CCDC78-203ENST00000423653 NEXMIFQ5QGS0 1516 aa25.22■■□□□ 1.63
CCDC78-203ENST00000423653 SLC4A1APQ9BWU0 796 aaKnown RBP25.2■■□□□ 1.62
CCDC78-203ENST00000423653 XRN1Q8IZH2 1706 aaKnown RBP25.2■■□□□ 1.62
CCDC78-203ENST00000423653 SOCS7O14512 581 aa25.19■■□□□ 1.62
CCDC78-203ENST00000423653 C14orf37Q86TY3 774 aa25.19■■□□□ 1.62
CCDC78-203ENST00000423653 PHF23Q9BUL5 403 aaPredicted RBP25.18■■□□□ 1.62
CCDC78-203ENST00000423653 PTPRUQ92729 1446 aa25.15■■□□□ 1.62
CCDC78-203ENST00000423653 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.15■■□□□ 1.62
CCDC78-203ENST00000423653 SLAIN2Q9P270 581 aa25.14■■□□□ 1.62
CCDC78-203ENST00000423653 AMOTL2Q9Y2J4 779 aa25.14■■□□□ 1.62
CCDC78-203ENST00000423653 PHLPP1O60346 1717 aa25.12■■□□□ 1.61
CCDC78-203ENST00000423653 CADPS2Q86UW7 1296 aa25.12■■□□□ 1.61
CCDC78-203ENST00000423653 DCCP43146 1447 aa25.12■■□□□ 1.61
CCDC78-203ENST00000423653 C19orf44Q9H6X5 657 aa25.11■■□□□ 1.61
CCDC78-203ENST00000423653 ATF3P18847 181 aa25.1■■□□□ 1.61
CCDC78-203ENST00000423653 ACIN1Q9UKV3 1341 aaKnown RBP25.09■■□□□ 1.61
CCDC78-203ENST00000423653 METP08581 1390 aa25.08■■□□□ 1.61
CCDC78-203ENST00000423653 VGFO15240 615 aaPredicted RBP25.08■■□□□ 1.61
CCDC78-203ENST00000423653 RPGRIP1LQ68CZ1 1315 aa25.08■■□□□ 1.6
CCDC78-203ENST00000423653 PPLO60437 1756 aa25.08■■□□□ 1.6
CCDC78-203ENST00000423653 CCDC144AA2RUR9 1427 aa25.07■■□□□ 1.6
CCDC78-203ENST00000423653 SETD1AO15047 1707 aaKnown RBP25.05■■□□□ 1.6
CCDC78-203ENST00000423653 COL16A1Q07092 1604 aaPredicted RBP25.04■■□□□ 1.6
CCDC78-203ENST00000423653 AHDC1Q5TGY3 1603 aaPredicted RBP25.04■■□□□ 1.6
CCDC78-203ENST00000423653 ADGRL3Q9HAR2 1447 aa25.03■■□□□ 1.6
CCDC78-203ENST00000423653 JCADQ9P266 1359 aa25.02■■□□□ 1.6
CCDC78-203ENST00000423653 PTCH1Q13635 1447 aa25.02■■□□□ 1.6
CCDC78-203ENST00000423653 NALCNQ8IZF0 1738 aa25■■□□□ 1.59
CCDC78-203ENST00000423653 FOXD1Q16676 465 aa25■■□□□ 1.59
CCDC78-203ENST00000423653 MPHOSPH9Q99550 1183 aa25■■□□□ 1.59
CCDC78-203ENST00000423653 SETD5Q9C0A6 1442 aa24.99■■□□□ 1.59
CCDC78-203ENST00000423653 PRAG1Q86YV5 1406 aa24.98■■□□□ 1.59
CCDC78-203ENST00000423653 ASXL1Q8IXJ9 1541 aa24.96■■□□□ 1.59
CCDC78-203ENST00000423653 MST1RQ04912 1400 aa24.96■■□□□ 1.59
CCDC78-203ENST00000423653 IFT172Q9UG01 1749 aa24.96■■□□□ 1.59
CCDC78-203ENST00000423653 SPATA31E1Q6ZUB1 1445 aa24.95■■□□□ 1.59
CCDC78-203ENST00000423653 ANKRD30BQ9BXX2 1392 aa24.94■■□□□ 1.58
CCDC78-203ENST00000423653 SHPRHQ149N8 1683 aa24.94■■□□□ 1.58
CCDC78-203ENST00000423653 BRINP3Q76B58 766 aa24.93■■□□□ 1.58
CCDC78-203ENST00000423653 NHSL1Q5SYE7 1610 aa24.91■■□□□ 1.58
CCDC78-203ENST00000423653 RAB3GAP2Q9H2M9 1393 aa24.9■■□□□ 1.58
CCDC78-203ENST00000423653 ROBO2Q9HCK4 1378 aa24.9■■□□□ 1.58
CCDC78-203ENST00000423653 SPATA31A6Q5VVP1 1343 aa24.89■■□□□ 1.58
CCDC78-203ENST00000423653 RGL3Q3MIN7 710 aa24.88■■□□□ 1.57
CCDC78-203ENST00000423653 RGS17Q9UGC6 210 aaPredicted RBP24.87■■□□□ 1.57
CCDC78-203ENST00000423653 PIK3C2GO75747 1445 aa24.86■■□□□ 1.57
CCDC78-203ENST00000423653 ADGRF5Q8IZF2 1346 aa24.85■■□□□ 1.57
CCDC78-203ENST00000423653 C1orf167Q5SNV9 1468 aa24.83■■□□□ 1.57
CCDC78-203ENST00000423653 CDC42BPGQ6DT37 1551 aa24.83■■□□□ 1.57
CCDC78-203ENST00000423653 KNDC1Q76NI1 1749 aa24.83■■□□□ 1.57
CCDC78-203ENST00000423653 LRP6O75581 1613 aa24.83■■□□□ 1.56
CCDC78-203ENST00000423653 TECPR2O15040 1411 aa24.82■■□□□ 1.56
CCDC78-203ENST00000423653 LAMC1P11047 1609 aa24.82■■□□□ 1.56
CCDC78-203ENST00000423653 MYOM2P54296 1465 aa24.81■■□□□ 1.56
CCDC78-203ENST00000423653 MEX3CQ5U5Q3 659 aaKnown RBP24.8■■□□□ 1.56
CCDC78-203ENST00000423653 LRPPRCP42704 1394 aaKnown RBP24.79■■□□□ 1.56
CCDC78-203ENST00000423653 POTEAQ6S8J7 498 aa24.76■■□□□ 1.55
CCDC78-203ENST00000423653 LRRC59Q96AG4 307 aaKnown RBP24.76■■□□□ 1.55
CCDC78-203ENST00000423653 NRXN1Q9ULB1 1477 aa24.76■■□□□ 1.55
CCDC78-203ENST00000423653 ABCC11Q96J66 1382 aa24.75■■□□□ 1.55
CCDC78-203ENST00000423653 YTHDC2Q9H6S0 1430 aaKnown RBP24.73■■□□□ 1.55
CCDC78-203ENST00000423653 STK26Q9P289 416 aa24.72■■□□□ 1.55
CCDC78-203ENST00000423653 PNPLA6Q8IY17 1366 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms