RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 TMEM2Q9UHN6 1383 aa14.94□□□□□ -0.02
NF1-203ENST00000422121 POLR1AO95602 1720 aaPredicted RBP14.93□□□□□ -0.02
NF1-203ENST00000422121 TXNDC2Q86VQ3 553 aa14.93□□□□□ -0.02
NF1-203ENST00000422121 NPHP4O75161 1426 aaPredicted RBP14.92□□□□□ -0.02
NF1-203ENST00000422121 KDM5AP29375 1690 aaKnown RBP14.91□□□□□ -0.02
NF1-203ENST00000422121 FBXO41Q8TF61 875 aa14.91□□□□□ -0.02
NF1-203ENST00000422121 SCAF11Q99590 1463 aaKnown RBP14.9□□□□□ -0.02
NF1-203ENST00000422121 ADGRB3O60242 1522 aa14.9□□□□□ -0.02
NF1-203ENST00000422121 TMEM131LA2VDJ0 1609 aa14.89□□□□□ -0.03
NF1-203ENST00000422121 TRIM52Q96A61 297 aa14.89□□□□□ -0.03
NF1-203ENST00000422121 STAG3Q9UJ98 1225 aa14.88□□□□□ -0.03
NF1-203ENST00000422121 ZFYVE9O95405 1425 aa14.88□□□□□ -0.03
NF1-203ENST00000422121 MYO5BQ9ULV0 1848 aa14.87□□□□□ -0.03
NF1-203ENST00000422121 IQGAP1P46940 1657 aa14.87□□□□□ -0.03
NF1-203ENST00000422121 SETD5Q9C0A6 1442 aa14.86□□□□□ -0.03
NF1-203ENST00000422121 EID1Q9Y6B2 187 aa14.85□□□□□ -0.03
NF1-203ENST00000422121 STRCP1A6NGW2 1772 aa14.84□□□□□ -0.03
NF1-203ENST00000422121 MPHOSPH9Q99550 1183 aa14.84□□□□□ -0.03
NF1-203ENST00000422121 U3KPZ7 1027 aaPredicted RBP14.84□□□□□ -0.03
NF1-203ENST00000422121 SPHKAPQ2M3C7 1700 aa14.83□□□□□ -0.03
NF1-203ENST00000422121 CHGAP10645 457 aaKnown RBP14.83□□□□□ -0.04
NF1-203ENST00000422121 RIMS2Q9UQ26 1411 aa14.83□□□□□ -0.04
NF1-203ENST00000422121 NUTM2DQ5VT03 806 aaPredicted RBP14.82□□□□□ -0.04
NF1-203ENST00000422121 SLC26A8Q96RN1 970 aa14.82□□□□□ -0.04
NF1-203ENST00000422121 RAB3GAP2Q9H2M9 1393 aa14.82□□□□□ -0.04
NF1-203ENST00000422121 TRPM2O94759 1503 aa14.82□□□□□ -0.04
NF1-203ENST00000422121 CLTCL1P53675 1640 aa14.81□□□□□ -0.04
NF1-203ENST00000422121 MYCNP04198 464 aaPredicted RBP14.8□□□□□ -0.04
NF1-203ENST00000422121 IQSEC2Q5JU85 1478 aa14.8□□□□□ -0.04
NF1-203ENST00000422121 PLEKHG1Q9ULL1 1385 aa14.79□□□□□ -0.04
NF1-203ENST00000422121 CPS1P31327 1500 aa14.78□□□□□ -0.04
NF1-203ENST00000422121 LRRC7Q96NW7 1537 aa14.77□□□□□ -0.04
NF1-203ENST00000422121 ADAMTS13Q76LX8 1427 aa14.77□□□□□ -0.04
NF1-203ENST00000422121 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.76□□□□□ -0.05
NF1-203ENST00000422121 KCNA6P17658 529 aa14.75□□□□□ -0.05
NF1-203ENST00000422121 HRCP23327 699 aa14.75□□□□□ -0.05
NF1-203ENST00000422121 HDGFP51858 240 aaKnown RBP14.75□□□□□ -0.05
NF1-203ENST00000422121 TBX22Q9Y458 520 aa14.75□□□□□ -0.05
NF1-203ENST00000422121 ALKQ9UM73 1620 aa14.74□□□□□ -0.05
NF1-203ENST00000422121 NEXMIFQ5QGS0 1516 aa14.73□□□□□ -0.05
NF1-203ENST00000422121 PPP1R15AO75807 674 aaPredicted RBP14.73□□□□□ -0.05
NF1-203ENST00000422121 UBAP1LF5GYI3 381 aa14.72□□□□□ -0.05
NF1-203ENST00000422121 ZNF326Q5BKZ1 582 aaKnown RBP14.72□□□□□ -0.05
NF1-203ENST00000422121 RBM33Q96EV2 1170 aaKnown RBP14.72□□□□□ -0.05
NF1-203ENST00000422121 NRXN3Q9Y4C0 1643 aa14.72□□□□□ -0.05
NF1-203ENST00000422121 SPATA31E1Q6ZUB1 1445 aa14.72□□□□□ -0.05
NF1-203ENST00000422121 ACIN1Q9UKV3 1341 aaKnown RBP14.71□□□□□ -0.05
NF1-203ENST00000422121 BCANQ96GW7 911 aa14.71□□□□□ -0.05
NF1-203ENST00000422121 XIRP1Q702N8 1843 aaKnown RBP14.71□□□□□ -0.06
NF1-203ENST00000422121 NWD1Q149M9 1564 aa14.69□□□□□ -0.06
NF1-203ENST00000422121 KIF1BO60333 1816 aa14.69□□□□□ -0.06
NF1-203ENST00000422121 PTPRUQ92729 1446 aa14.69□□□□□ -0.06
NF1-203ENST00000422121 ATXN8OSP0DMR3 200 aa14.69□□□□□ -0.06
NF1-203ENST00000422121 SPINK5Q9NQ38 1064 aaPredicted RBP14.69□□□□□ -0.06
NF1-203ENST00000422121 TMEM94Q12767 1356 aa14.69□□□□□ -0.06
NF1-203ENST00000422121 CHD2O14647 1828 aaKnown RBP14.69□□□□□ -0.06
NF1-203ENST00000422121 ANKRD30BQ9BXX2 1392 aa14.68□□□□□ -0.06
NF1-203ENST00000422121 SETBP1Q9Y6X0 1596 aa14.68□□□□□ -0.06
NF1-203ENST00000422121 CCDC144AA2RUR9 1427 aa14.67□□□□□ -0.06
NF1-203ENST00000422121 METP08581 1390 aa14.67□□□□□ -0.06
NF1-203ENST00000422121 RPGRIP1LQ68CZ1 1315 aa14.66□□□□□ -0.06
NF1-203ENST00000422121 RGL3Q3MIN7 710 aa14.66□□□□□ -0.06
NF1-203ENST00000422121 PROSER2Q86WR7 435 aaPredicted RBP14.66□□□□□ -0.06
NF1-203ENST00000422121 PIK3R4Q99570 1358 aa14.65□□□□□ -0.06
NF1-203ENST00000422121 VGFO15240 615 aaPredicted RBP14.65□□□□□ -0.06
NF1-203ENST00000422121 AMOTL2Q9Y2J4 779 aa14.65□□□□□ -0.06
NF1-203ENST00000422121 ADGRF5Q8IZF2 1346 aa14.65□□□□□ -0.06
NF1-203ENST00000422121 DIP2AQ14689 1571 aa14.64□□□□□ -0.07
NF1-203ENST00000422121 TOM1O60784 492 aa14.64□□□□□ -0.07
NF1-203ENST00000422121 NKTRP30414 1462 aaKnown RBP14.63□□□□□ -0.07
NF1-203ENST00000422121 PPLO60437 1756 aa14.63□□□□□ -0.07
NF1-203ENST00000422121 PIP4K2BP78356 416 aa14.63□□□□□ -0.07
NF1-203ENST00000422121 SETD1AO15047 1707 aaKnown RBP14.61□□□□□ -0.07
NF1-203ENST00000422121 HSPA1LP34931 641 aa14.6□□□□□ -0.07
NF1-203ENST00000422121 XRN1Q8IZH2 1706 aaKnown RBP14.59□□□□□ -0.07
NF1-203ENST00000422121 IFT172Q9UG01 1749 aa14.59□□□□□ -0.07
NF1-203ENST00000422121 CAPN15O75808 1086 aa14.59□□□□□ -0.07
NF1-203ENST00000422121 NCOA3Q9Y6Q9 1424 aa14.57□□□□□ -0.08
NF1-203ENST00000422121 PIK3C2GO75747 1445 aa14.56□□□□□ -0.08
NF1-203ENST00000422121 NRXN1Q9ULB1 1477 aa14.56□□□□□ -0.08
NF1-203ENST00000422121 C19orf44Q9H6X5 657 aa14.55□□□□□ -0.08
NF1-203ENST00000422121 DHX57Q6P158 1386 aaKnown RBP14.55□□□□□ -0.08
NF1-203ENST00000422121 ROBO2Q9HCK4 1378 aa14.55□□□□□ -0.08
NF1-203ENST00000422121 DSG3P32926 999 aa14.54□□□□□ -0.08
NF1-203ENST00000422121 TMEM132EQ6IEE7 984 aa14.54□□□□□ -0.08
NF1-203ENST00000422121 C14orf93Q9H972 538 aaKnown RBP14.54□□□□□ -0.08
NF1-203ENST00000422121 SLAIN2Q9P270 581 aa14.54□□□□□ -0.08
NF1-203ENST00000422121 FAM135BQ49AJ0 1406 aa14.54□□□□□ -0.08
NF1-203ENST00000422121 ASXL1Q8IXJ9 1541 aa14.54□□□□□ -0.08
NF1-203ENST00000422121 PRAG1Q86YV5 1406 aa14.53□□□□□ -0.08
NF1-203ENST00000422121 MSH6P52701 1360 aa14.53□□□□□ -0.08
NF1-203ENST00000422121 TRIM26Q12899 539 aaPredicted RBP14.53□□□□□ -0.08
NF1-203ENST00000422121 CFAP70Q5T0N1 1121 aa14.52□□□□□ -0.09
NF1-203ENST00000422121 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.52□□□□□ -0.09
NF1-203ENST00000422121 MYOM2P54296 1465 aa14.51□□□□□ -0.09
NF1-203ENST00000422121 PTCH1Q13635 1447 aa14.49□□□□□ -0.09
NF1-203ENST00000422121 C14orf37Q86TY3 774 aa14.49□□□□□ -0.09
NF1-203ENST00000422121 DCAF11Q8TEB1 546 aa14.49□□□□□ -0.09
NF1-203ENST00000422121 LRPPRCP42704 1394 aaKnown RBP14.48□□□□□ -0.09
NF1-203ENST00000422121 ABCC11Q96J66 1382 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms