RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 NPHP4O75161 1426 aaPredicted RBP23.14■■□□□ 1.29
BRAT1-202ENST00000421712 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.13■■□□□ 1.29
BRAT1-202ENST00000421712 CCDC144AA2RUR9 1427 aa23.13■■□□□ 1.29
BRAT1-202ENST00000421712 RIMS2Q9UQ26 1411 aa23.12■■□□□ 1.29
BRAT1-202ENST00000421712 KIF1BO60333 1816 aa23.1■■□□□ 1.29
BRAT1-202ENST00000421712 NEURL4Q96JN8 1562 aa23.1■■□□□ 1.29
BRAT1-202ENST00000421712 PCGF6Q9BYE7 350 aa23.09■■□□□ 1.29
BRAT1-202ENST00000421712 RGL3Q3MIN7 710 aa23.08■■□□□ 1.29
BRAT1-202ENST00000421712 MED14O60244 1454 aa23.08■■□□□ 1.29
BRAT1-202ENST00000421712 ZFYVE9O95405 1425 aa23.06■■□□□ 1.28
BRAT1-202ENST00000421712 IQGAP1P46940 1657 aa23.06■■□□□ 1.28
BRAT1-202ENST00000421712 SLC26A8Q96RN1 970 aa23.04■■□□□ 1.28
BRAT1-202ENST00000421712 ZNF335Q9H4Z2 1342 aaPredicted RBP23.04■■□□□ 1.28
BRAT1-202ENST00000421712 ANKRD30BQ9BXX2 1392 aa23.03■■□□□ 1.28
BRAT1-202ENST00000421712 PLEKHG1Q9ULL1 1385 aa23.01■■□□□ 1.27
BRAT1-202ENST00000421712 RPGRIP1LQ68CZ1 1315 aa23■■□□□ 1.27
BRAT1-202ENST00000421712 VGFO15240 615 aaPredicted RBP22.99■■□□□ 1.27
BRAT1-202ENST00000421712 CERKQ8TCT0 537 aa22.96■■□□□ 1.27
BRAT1-202ENST00000421712 NEXMIFQ5QGS0 1516 aa22.94■■□□□ 1.26
BRAT1-202ENST00000421712 SPATA31E1Q6ZUB1 1445 aa22.94■■□□□ 1.26
BRAT1-202ENST00000421712 TBX22Q9Y458 520 aa22.92■■□□□ 1.26
BRAT1-202ENST00000421712 DHX57Q6P158 1386 aaKnown RBP22.91■■□□□ 1.26
BRAT1-202ENST00000421712 LTBP4Q8N2S1 1624 aa22.9■■□□□ 1.26
BRAT1-202ENST00000421712 KCNA6P17658 529 aa22.88■■□□□ 1.25
BRAT1-202ENST00000421712 NEUROD1Q13562 356 aa22.88■■□□□ 1.25
BRAT1-202ENST00000421712 KDM2AQ9Y2K7 1162 aa22.88■■□□□ 1.25
BRAT1-202ENST00000421712 PPLO60437 1756 aa22.88■■□□□ 1.25
BRAT1-202ENST00000421712 ADAMTS13Q76LX8 1427 aa22.87■■□□□ 1.25
BRAT1-202ENST00000421712 ADGRF5Q8IZF2 1346 aa22.86■■□□□ 1.25
BRAT1-202ENST00000421712 SIN3AQ96ST3 1273 aa22.86■■□□□ 1.25
BRAT1-202ENST00000421712 DCAF11Q8TEB1 546 aa22.85■■□□□ 1.25
BRAT1-202ENST00000421712 CPS1P31327 1500 aa22.85■■□□□ 1.25
BRAT1-202ENST00000421712 PROSER2Q86WR7 435 aaPredicted RBP22.83■■□□□ 1.25
BRAT1-202ENST00000421712 DIP2AQ14689 1571 aa22.83■■□□□ 1.25
BRAT1-202ENST00000421712 SETBP1Q9Y6X0 1596 aa22.83■■□□□ 1.25
BRAT1-202ENST00000421712 STRCP1A6NGW2 1772 aa22.81■■□□□ 1.24
BRAT1-202ENST00000421712 AMOTL2Q9Y2J4 779 aa22.81■■□□□ 1.24
BRAT1-202ENST00000421712 FBXO41Q8TF61 875 aa22.8■■□□□ 1.24
BRAT1-202ENST00000421712 NRXN3Q9Y4C0 1643 aa22.79■■□□□ 1.24
BRAT1-202ENST00000421712 METP08581 1390 aa22.79■■□□□ 1.24
BRAT1-202ENST00000421712 PIK3R4Q99570 1358 aa22.79■■□□□ 1.24
BRAT1-202ENST00000421712 IFT172Q9UG01 1749 aa22.79■■□□□ 1.24
BRAT1-202ENST00000421712 RBM33Q96EV2 1170 aaKnown RBP22.78■■□□□ 1.24
BRAT1-202ENST00000421712 STAC3Q96MF2 364 aa22.77■■□□□ 1.24
BRAT1-202ENST00000421712 ALKQ9UM73 1620 aa22.77■■□□□ 1.24
BRAT1-202ENST00000421712 CHD2O14647 1828 aaKnown RBP22.77■■□□□ 1.24
BRAT1-202ENST00000421712 LRRC7Q96NW7 1537 aa22.76■■□□□ 1.23
BRAT1-202ENST00000421712 MYOM2P54296 1465 aa22.74■■□□□ 1.23
BRAT1-202ENST00000421712 UBAP1LF5GYI3 381 aa22.74■■□□□ 1.23
BRAT1-202ENST00000421712 C14orf37Q86TY3 774 aa22.74■■□□□ 1.23
BRAT1-202ENST00000421712 PIK3C2GO75747 1445 aa22.74■■□□□ 1.23
BRAT1-202ENST00000421712 PTPRUQ92729 1446 aa22.74■■□□□ 1.23
BRAT1-202ENST00000421712 IQSEC2Q5JU85 1478 aa22.73■■□□□ 1.23
BRAT1-202ENST00000421712 CFAP70Q5T0N1 1121 aa22.73■■□□□ 1.23
BRAT1-202ENST00000421712 TMEM94Q12767 1356 aa22.73■■□□□ 1.23
BRAT1-202ENST00000421712 NWD1Q149M9 1564 aa22.72■■□□□ 1.23
BRAT1-202ENST00000421712 TMEM132EQ6IEE7 984 aa22.72■■□□□ 1.23
BRAT1-202ENST00000421712 C14orf93Q9H972 538 aaKnown RBP22.72■■□□□ 1.23
BRAT1-202ENST00000421712 STK26Q9P289 416 aa22.72■■□□□ 1.23
BRAT1-202ENST00000421712 NKTRP30414 1462 aaKnown RBP22.72■■□□□ 1.23
BRAT1-202ENST00000421712 L3MBTL2Q969R5 705 aa22.71■■□□□ 1.23
BRAT1-202ENST00000421712 TOM1O60784 492 aa22.7■■□□□ 1.22
BRAT1-202ENST00000421712 CCER1Q8TC90 406 aaPredicted RBP22.69■■□□□ 1.22
BRAT1-202ENST00000421712 NRXN1Q9ULB1 1477 aa22.68■■□□□ 1.22
BRAT1-202ENST00000421712 SCAF1Q9H7N4 1312 aaKnown RBP22.67■■□□□ 1.22
BRAT1-202ENST00000421712 TONSLQ96HA7 1378 aa22.66■■□□□ 1.22
BRAT1-202ENST00000421712 SETD1AO15047 1707 aaKnown RBP22.66■■□□□ 1.22
BRAT1-202ENST00000421712 PIP4K2BP78356 416 aa22.65■■□□□ 1.22
BRAT1-202ENST00000421712 MSH6P52701 1360 aa22.64■■□□□ 1.22
BRAT1-202ENST00000421712 XRN1Q8IZH2 1706 aaKnown RBP22.63■■□□□ 1.21
BRAT1-202ENST00000421712 XIRP1Q702N8 1843 aaKnown RBP22.62■■□□□ 1.21
BRAT1-202ENST00000421712 LRPPRCP42704 1394 aaKnown RBP22.62■■□□□ 1.21
BRAT1-202ENST00000421712 LAMC1P11047 1609 aa22.61■■□□□ 1.21
BRAT1-202ENST00000421712 YTHDC2Q9H6S0 1430 aaKnown RBP22.6■■□□□ 1.21
BRAT1-202ENST00000421712 NCOA3Q9Y6Q9 1424 aa22.6■■□□□ 1.21
BRAT1-202ENST00000421712 C19orf44Q9H6X5 657 aa22.6■■□□□ 1.21
BRAT1-202ENST00000421712 ROBO2Q9HCK4 1378 aa22.6■■□□□ 1.21
BRAT1-202ENST00000421712 ATF3P18847 181 aa22.59■■□□□ 1.21
BRAT1-202ENST00000421712 CLSPNQ9HAW4 1339 aa22.58■■□□□ 1.21
BRAT1-202ENST00000421712 PRAG1Q86YV5 1406 aa22.58■■□□□ 1.21
BRAT1-202ENST00000421712 TRAK1Q9UPV9 953 aa22.58■■□□□ 1.21
BRAT1-202ENST00000421712 ABCC11Q96J66 1382 aa22.58■■□□□ 1.21
BRAT1-202ENST00000421712 ASXL1Q8IXJ9 1541 aa22.57■■□□□ 1.2
BRAT1-202ENST00000421712 WAPLQ7Z5K2 1190 aa22.57■■□□□ 1.2
BRAT1-202ENST00000421712 PTCH1Q13635 1447 aa22.57■■□□□ 1.2
BRAT1-202ENST00000421712 CADPS2Q86UW7 1296 aa22.55■■□□□ 1.2
BRAT1-202ENST00000421712 POGKQ9P215 609 aa22.55■■□□□ 1.2
BRAT1-202ENST00000421712 NBPF1Q3BBV0 1214 aa22.54■■□□□ 1.2
BRAT1-202ENST00000421712 SAFB2Q14151 953 aaKnown RBP eCLIP22.53■■□□□ 1.2
BRAT1-202ENST00000421712 TECPR2O15040 1411 aa22.52■■□□□ 1.2
BRAT1-202ENST00000421712 SIRT1Q96EB6 747 aa22.52■■□□□ 1.2
BRAT1-202ENST00000421712 PRAM1Q96QH2 718 aa22.52■■□□□ 1.2
BRAT1-202ENST00000421712 SLAIN2Q9P270 581 aa22.52■■□□□ 1.2
BRAT1-202ENST00000421712 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.51■■□□□ 1.19
BRAT1-202ENST00000421712 ADGRB1O14514 1584 aa22.5■■□□□ 1.19
BRAT1-202ENST00000421712 NBPF8Q3BBV2 869 aa22.5■■□□□ 1.19
BRAT1-202ENST00000421712 PLEKHH1Q9ULM0 1364 aa22.5■■□□□ 1.19
BRAT1-202ENST00000421712 ADGRL3Q9HAR2 1447 aa22.49■■□□□ 1.19
BRAT1-202ENST00000421712 KNDC1Q76NI1 1749 aa22.49■■□□□ 1.19
BRAT1-202ENST00000421712 KIAA1210Q9ULL0 1709 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms