RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 THOC2Q8NI27 1593 aaKnown RBP13.58□□□□□ -0.24
PTCH1-206ENST00000421141 CHD1O14646 1710 aa13.58□□□□□ -0.24
PTCH1-206ENST00000421141 ERBINQ96RT1 1412 aa13.57□□□□□ -0.24
PTCH1-206ENST00000421141 KIAA1211Q6ZU35 1233 aa13.57□□□□□ -0.24
PTCH1-206ENST00000421141 MYBBP1AQ9BQG0 1328 aaKnown RBP13.57□□□□□ -0.24
PTCH1-206ENST00000421141 CCDC146Q8IYE0 955 aa13.56□□□□□ -0.24
PTCH1-206ENST00000421141 FRAT2O75474 233 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-206ENST00000421141 TMEM132EQ6IEE7 984 aa13.56□□□□□ -0.24
PTCH1-206ENST00000421141 TAOK2Q9UL54 1235 aa13.56□□□□□ -0.24
PTCH1-206ENST00000421141 SLC4A10Q6U841 1118 aa13.56□□□□□ -0.24
PTCH1-206ENST00000421141 TULP1O00294 542 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-206ENST00000421141 HMMRO75330 724 aa13.55□□□□□ -0.24
PTCH1-206ENST00000421141 KIAA0556O60303 1618 aa13.55□□□□□ -0.24
PTCH1-206ENST00000421141 ASXL2Q76L83 1435 aa13.55□□□□□ -0.24
PTCH1-206ENST00000421141 KIAA1107Q9UPP5 1409 aa13.55□□□□□ -0.24
PTCH1-206ENST00000421141 RGS3P49796 1198 aa13.55□□□□□ -0.24
PTCH1-206ENST00000421141 CFAP74Q9C0B2 1584 aa13.54□□□□□ -0.24
PTCH1-206ENST00000421141 NLRP6P59044 892 aa13.54□□□□□ -0.24
PTCH1-206ENST00000421141 RPGRIP1LQ68CZ1 1315 aa13.54□□□□□ -0.24
PTCH1-206ENST00000421141 DIAPH1O60610 1272 aaKnown RBP13.54□□□□□ -0.24
PTCH1-206ENST00000421141 NEXNQ0ZGT2 675 aa13.53□□□□□ -0.24
PTCH1-206ENST00000421141 PRAM1Q96QH2 718 aa13.53□□□□□ -0.24
PTCH1-206ENST00000421141 MYO5CQ9NQX4 1742 aa13.53□□□□□ -0.24
PTCH1-206ENST00000421141 CABP2Q9NPB3 220 aa13.53□□□□□ -0.24
PTCH1-206ENST00000421141 WDR7Q9Y4E6 1490 aa13.53□□□□□ -0.24
PTCH1-206ENST00000421141 NLRP2Q9NX02 1062 aa13.52□□□□□ -0.24
PTCH1-206ENST00000421141 NUTM2GQ5VZR2 741 aa13.52□□□□□ -0.24
PTCH1-206ENST00000421141 APBB1O00213 710 aa13.52□□□□□ -0.24
PTCH1-206ENST00000421141 WASHC2AQ641Q2 1341 aa13.52□□□□□ -0.25
PTCH1-206ENST00000421141 PPP6R1Q9UPN7 881 aa13.51□□□□□ -0.25
PTCH1-206ENST00000421141 NUTM2BA6NNL0 878 aaPredicted RBP13.51□□□□□ -0.25
PTCH1-206ENST00000421141 NUTM2EB1AL46 878 aaPredicted RBP13.51□□□□□ -0.25
PTCH1-206ENST00000421141 NUTM2AQ8IVF1 878 aaPredicted RBP13.51□□□□□ -0.25
PTCH1-206ENST00000421141 RCAN3Q9UKA8 241 aa13.51□□□□□ -0.25
PTCH1-206ENST00000421141 ANKRD30BQ9BXX2 1392 aa13.5□□□□□ -0.25
PTCH1-206ENST00000421141 PPP4R2Q9NY27 417 aa13.5□□□□□ -0.25
PTCH1-206ENST00000421141 PMFBP1Q8TBY8 1022 aa13.5□□□□□ -0.25
PTCH1-206ENST00000421141 ABCA5Q8WWZ7 1642 aa13.5□□□□□ -0.25
PTCH1-206ENST00000421141 STRN4Q9NRL3 753 aa13.49□□□□□ -0.25
PTCH1-206ENST00000421141 ROCK1Q13464 1354 aa13.49□□□□□ -0.25
PTCH1-206ENST00000421141 DDX58O95786 925 aaKnown RBP13.49□□□□□ -0.25
PTCH1-206ENST00000421141 MAP3K1Q13233 1512 aa13.49□□□□□ -0.25
PTCH1-206ENST00000421141 SLC26A8Q96RN1 970 aa13.49□□□□□ -0.25
PTCH1-206ENST00000421141 RWDD1Q9H446 243 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-206ENST00000421141 USP35Q9P2H5 1018 aa13.48□□□□□ -0.25
PTCH1-206ENST00000421141 ZNF692Q9BU19 519 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-206ENST00000421141 HSP90AB1P08238 724 aaKnown RBP13.48□□□□□ -0.25
PTCH1-206ENST00000421141 ANP32EQ9BTT0 268 aa13.47□□□□□ -0.25
PTCH1-206ENST00000421141 RTEL1-TNFRSF6BF6WH68 1400 aa13.47□□□□□ -0.25
PTCH1-206ENST00000421141 GNL2Q13823 731 aaKnown RBP13.47□□□□□ -0.25
PTCH1-206ENST00000421141 KLHL34Q8N239 644 aa13.47□□□□□ -0.25
PTCH1-206ENST00000421141 ZNF518AQ6AHZ1 1483 aa13.47□□□□□ -0.25
PTCH1-206ENST00000421141 UGGT2Q9NYU1 1516 aa13.47□□□□□ -0.25
PTCH1-206ENST00000421141 HMGB2P26583 209 aaKnown RBP13.47□□□□□ -0.25
PTCH1-206ENST00000421141 NGEFQ8N5V2 710 aa13.47□□□□□ -0.25
PTCH1-206ENST00000421141 CFAP70Q5T0N1 1121 aa13.47□□□□□ -0.25
PTCH1-206ENST00000421141 CDK19Q9BWU1 502 aa13.47□□□□□ -0.25
PTCH1-206ENST00000421141 RRP7AQ9Y3A4 280 aaKnown RBP13.46□□□□□ -0.25
PTCH1-206ENST00000421141 CFAP43Q8NDM7 1665 aa13.46□□□□□ -0.25
PTCH1-206ENST00000421141 PDE3BQ13370 1112 aa13.45□□□□□ -0.26
PTCH1-206ENST00000421141 EIF2S2P20042 333 aaKnown RBP13.45□□□□□ -0.26
PTCH1-206ENST00000421141 C9orf78Q9NZ63 289 aaPredicted RBP13.45□□□□□ -0.26
PTCH1-206ENST00000421141 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.45□□□□□ -0.26
PTCH1-206ENST00000421141 TRIM6-TRIM34B2RNG4 842 aa13.44□□□□□ -0.26
PTCH1-206ENST00000421141 DUOX2Q9NRD8 1548 aa13.43□□□□□ -0.26
PTCH1-206ENST00000421141 TOM1L2Q6ZVM7 507 aa13.43□□□□□ -0.26
PTCH1-206ENST00000421141 NOL10Q9BSC4 688 aaKnown RBP13.43□□□□□ -0.26
PTCH1-206ENST00000421141 VPS37DQ86XT2 251 aa13.43□□□□□ -0.26
PTCH1-206ENST00000421141 LRRFIP1Q32MZ4 808 aaKnown RBP13.42□□□□□ -0.26
PTCH1-206ENST00000421141 E9PSI1 815 aa13.42□□□□□ -0.26
PTCH1-206ENST00000421141 RIPK4P57078 832 aa13.42□□□□□ -0.26
PTCH1-206ENST00000421141 PLEKHO1Q53GL0 409 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-206ENST00000421141 B4GALNT3Q6L9W6 998 aa13.41□□□□□ -0.26
PTCH1-206ENST00000421141 CNTLNQ9NXG0 1405 aa13.41□□□□□ -0.26
PTCH1-206ENST00000421141 LRPPRCP42704 1394 aaKnown RBP13.41□□□□□ -0.26
PTCH1-206ENST00000421141 TATP17735 454 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-206ENST00000421141 TRIM34Q9BYJ4 488 aa13.41□□□□□ -0.26
PTCH1-206ENST00000421141 KDM5BQ9UGL1 1544 aa13.41□□□□□ -0.26
PTCH1-206ENST00000421141 PRDM11Q9NQV5 511 aa13.41□□□□□ -0.26
PTCH1-206ENST00000421141 SYCP2Q9BX26 1530 aa13.41□□□□□ -0.26
PTCH1-206ENST00000421141 TPRNQ4KMQ1 711 aa13.41□□□□□ -0.26
PTCH1-206ENST00000421141 HSP90B1P14625 803 aaKnown RBP13.41□□□□□ -0.26
PTCH1-206ENST00000421141 HSCBQ8IWL3 235 aa13.4□□□□□ -0.26
PTCH1-206ENST00000421141 ATP10BO94823 1461 aa13.4□□□□□ -0.26
PTCH1-206ENST00000421141 AMOTL1Q8IY63 956 aa13.4□□□□□ -0.26
PTCH1-206ENST00000421141 HMOX1P09601 288 aa13.4□□□□□ -0.26
PTCH1-206ENST00000421141 GGNBP2Q9H3C7 697 aa13.4□□□□□ -0.26
PTCH1-206ENST00000421141 TSPYL4Q9UJ04 414 aa13.4□□□□□ -0.26
PTCH1-206ENST00000421141 ABCC2Q92887 1545 aa13.4□□□□□ -0.26
PTCH1-206ENST00000421141 RUNDC1Q96C34 613 aa13.39□□□□□ -0.27
PTCH1-206ENST00000421141 GAS2L2Q8NHY3 880 aa13.39□□□□□ -0.27
PTCH1-206ENST00000421141 ADGBQ8N7X0 1667 aa13.39□□□□□ -0.27
PTCH1-206ENST00000421141 GOLGA6L4A6NEF3 574 aa13.39□□□□□ -0.27
PTCH1-206ENST00000421141 KIF6Q6ZMV9 814 aa13.39□□□□□ -0.27
PTCH1-206ENST00000421141 ATAD2Q6PL18 1390 aa13.39□□□□□ -0.27
PTCH1-206ENST00000421141 RBM33Q96EV2 1170 aaKnown RBP13.39□□□□□ -0.27
PTCH1-206ENST00000421141 PLCH2O75038 1416 aa13.38□□□□□ -0.27
PTCH1-206ENST00000421141 SETD1BQ9UPS6 1966 aaKnown RBP13.37□□□□□ -0.27
PTCH1-206ENST00000421141 CLSTN1O94985 981 aa13.37□□□□□ -0.27
PTCH1-206ENST00000421141 NBR1Q14596 966 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms