RNA–Protein interactions for RNA: ENST00000419650.1

GACAT1-201, gastric cancer associated transcript 1, humanhuman

TSL 4 BASIC

Gene GACAT1, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT1-201ENST00000419650 EID1Q9Y6B2 187 aa12.88□□□□□ -0.35
GACAT1-201ENST00000419650 ZFYVE9O95405 1425 aa12.84□□□□□ -0.35
GACAT1-201ENST00000419650 SCAF1Q9H7N4 1312 aaKnown RBP12.84□□□□□ -0.35
GACAT1-201ENST00000419650 RIMS2Q9UQ26 1411 aa12.83□□□□□ -0.36
GACAT1-201ENST00000419650 CHGAP10645 457 aaKnown RBP12.83□□□□□ -0.36
GACAT1-201ENST00000419650 CLTCL1P53675 1640 aa12.83□□□□□ -0.36
GACAT1-201ENST00000419650 TRIM52Q96A61 297 aa12.82□□□□□ -0.36
GACAT1-201ENST00000419650 TRPM2O94759 1503 aa12.82□□□□□ -0.36
GACAT1-201ENST00000419650 XIRP1Q702N8 1843 aaKnown RBP12.81□□□□□ -0.36
GACAT1-201ENST00000419650 UBAP1LF5GYI3 381 aa12.81□□□□□ -0.36
GACAT1-201ENST00000419650 LRRC7Q96NW7 1537 aa12.81□□□□□ -0.36
GACAT1-201ENST00000419650 KIF1BO60333 1816 aa12.8□□□□□ -0.36
GACAT1-201ENST00000419650 PPP1R15AO75807 674 aaPredicted RBP12.79□□□□□ -0.36
GACAT1-201ENST00000419650 NUTM2DQ5VT03 806 aaPredicted RBP12.79□□□□□ -0.36
GACAT1-201ENST00000419650 BCANQ96GW7 911 aa12.79□□□□□ -0.36
GACAT1-201ENST00000419650 SLC26A8Q96RN1 970 aa12.79□□□□□ -0.36
GACAT1-201ENST00000419650 PLEKHG1Q9ULL1 1385 aa12.79□□□□□ -0.36
GACAT1-201ENST00000419650 NWD1Q149M9 1564 aa12.78□□□□□ -0.36
GACAT1-201ENST00000419650 ALKQ9UM73 1620 aa12.78□□□□□ -0.36
GACAT1-201ENST00000419650 SLC4A1APQ9BWU0 796 aaKnown RBP12.77□□□□□ -0.37
GACAT1-201ENST00000419650 CHD2O14647 1828 aaKnown RBP12.76□□□□□ -0.37
GACAT1-201ENST00000419650 HDGFP51858 240 aaKnown RBP12.76□□□□□ -0.37
GACAT1-201ENST00000419650 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.76□□□□□ -0.37
GACAT1-201ENST00000419650 DIP2AQ14689 1571 aa12.75□□□□□ -0.37
GACAT1-201ENST00000419650 NRXN3Q9Y4C0 1643 aa12.74□□□□□ -0.37
GACAT1-201ENST00000419650 NEXMIFQ5QGS0 1516 aa12.74□□□□□ -0.37
GACAT1-201ENST00000419650 NKTRP30414 1462 aaKnown RBP12.74□□□□□ -0.37
GACAT1-201ENST00000419650 ADAMTS13Q76LX8 1427 aa12.74□□□□□ -0.37
GACAT1-201ENST00000419650 SETD5Q9C0A6 1442 aa12.74□□□□□ -0.37
GACAT1-201ENST00000419650 TOM1O60784 492 aa12.74□□□□□ -0.37
GACAT1-201ENST00000419650 PIP4K2BP78356 416 aa12.74□□□□□ -0.37
GACAT1-201ENST00000419650 KCNA6P17658 529 aa12.73□□□□□ -0.37
GACAT1-201ENST00000419650 ZNF326Q5BKZ1 582 aaKnown RBP12.73□□□□□ -0.37
GACAT1-201ENST00000419650 TMEM94Q12767 1356 aa12.72□□□□□ -0.37
GACAT1-201ENST00000419650 SETBP1Q9Y6X0 1596 aa12.72□□□□□ -0.37
GACAT1-201ENST00000419650 PPLO60437 1756 aa12.71□□□□□ -0.38
GACAT1-201ENST00000419650 RAB3GAP2Q9H2M9 1393 aa12.7□□□□□ -0.38
GACAT1-201ENST00000419650 PROSER2Q86WR7 435 aaPredicted RBP12.7□□□□□ -0.38
GACAT1-201ENST00000419650 RBM33Q96EV2 1170 aaKnown RBP12.7□□□□□ -0.38
GACAT1-201ENST00000419650 TBX22Q9Y458 520 aa12.7□□□□□ -0.38
GACAT1-201ENST00000419650 MPHOSPH9Q99550 1183 aa12.69□□□□□ -0.38
GACAT1-201ENST00000419650 XRN1Q8IZH2 1706 aaKnown RBP12.68□□□□□ -0.38
GACAT1-201ENST00000419650 CCDC144AA2RUR9 1427 aa12.68□□□□□ -0.38
GACAT1-201ENST00000419650 HSPA1LP34931 641 aa12.67□□□□□ -0.38
GACAT1-201ENST00000419650 PTPRUQ92729 1446 aa12.67□□□□□ -0.38
GACAT1-201ENST00000419650 PIK3R4Q99570 1358 aa12.67□□□□□ -0.38
GACAT1-201ENST00000419650 SETD1AO15047 1707 aaKnown RBP12.66□□□□□ -0.38
GACAT1-201ENST00000419650 IFT172Q9UG01 1749 aa12.66□□□□□ -0.38
GACAT1-201ENST00000419650 ACIN1Q9UKV3 1341 aaKnown RBP12.64□□□□□ -0.39
GACAT1-201ENST00000419650 ROBO1Q9Y6N7 1651 aa12.64□□□□□ -0.39
GACAT1-201ENST00000419650 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.64□□□□□ -0.39
GACAT1-201ENST00000419650 METP08581 1390 aa12.64□□□□□ -0.39
GACAT1-201ENST00000419650 MSH6P52701 1360 aa12.64□□□□□ -0.39
GACAT1-201ENST00000419650 RPGRIP1LQ68CZ1 1315 aa12.63□□□□□ -0.39
GACAT1-201ENST00000419650 SPATA31E1Q6ZUB1 1445 aa12.63□□□□□ -0.39
GACAT1-201ENST00000419650 AMOTL2Q9Y2J4 779 aa12.63□□□□□ -0.39
GACAT1-201ENST00000419650 VGFO15240 615 aaPredicted RBP12.62□□□□□ -0.39
GACAT1-201ENST00000419650 C14orf37Q86TY3 774 aa12.62□□□□□ -0.39
GACAT1-201ENST00000419650 DISP3Q9P2K9 1392 aa12.61□□□□□ -0.39
GACAT1-201ENST00000419650 RGL3Q3MIN7 710 aa12.61□□□□□ -0.39
GACAT1-201ENST00000419650 NCOA3Q9Y6Q9 1424 aa12.61□□□□□ -0.39
GACAT1-201ENST00000419650 NALCNQ8IZF0 1738 aa12.6□□□□□ -0.39
GACAT1-201ENST00000419650 FAM135BQ49AJ0 1406 aa12.6□□□□□ -0.39
GACAT1-201ENST00000419650 MED1Q15648 1581 aaPredicted RBP12.59□□□□□ -0.39
GACAT1-201ENST00000419650 ADGRF5Q8IZF2 1346 aa12.58□□□□□ -0.4
GACAT1-201ENST00000419650 ANKRD30BQ9BXX2 1392 aa12.57□□□□□ -0.4
GACAT1-201ENST00000419650 PHLPP1O60346 1717 aa12.57□□□□□ -0.4
GACAT1-201ENST00000419650 CACNB1Q02641 598 aaPredicted RBP12.57□□□□□ -0.4
GACAT1-201ENST00000419650 C19orf44Q9H6X5 657 aa12.56□□□□□ -0.4
GACAT1-201ENST00000419650 SLAIN2Q9P270 581 aa12.56□□□□□ -0.4
GACAT1-201ENST00000419650 PIK3C2GO75747 1445 aa12.55□□□□□ -0.4
GACAT1-201ENST00000419650 DCCP43146 1447 aa12.55□□□□□ -0.4
GACAT1-201ENST00000419650 PTCH1Q13635 1447 aa12.55□□□□□ -0.4
GACAT1-201ENST00000419650 ADGRL3Q9HAR2 1447 aa12.55□□□□□ -0.4
GACAT1-201ENST00000419650 ATF3P18847 181 aa12.55□□□□□ -0.4
GACAT1-201ENST00000419650 HRCP23327 699 aa12.55□□□□□ -0.4
GACAT1-201ENST00000419650 ASXL1Q8IXJ9 1541 aa12.55□□□□□ -0.4
GACAT1-201ENST00000419650 ROBO2Q9HCK4 1378 aa12.55□□□□□ -0.4
GACAT1-201ENST00000419650 MYOM2P54296 1465 aa12.54□□□□□ -0.4
GACAT1-201ENST00000419650 CADPS2Q86UW7 1296 aa12.54□□□□□ -0.4
GACAT1-201ENST00000419650 LAMC1P11047 1609 aa12.54□□□□□ -0.4
GACAT1-201ENST00000419650 PRAG1Q86YV5 1406 aa12.54□□□□□ -0.4
GACAT1-201ENST00000419650 KNDC1Q76NI1 1749 aa12.53□□□□□ -0.4
GACAT1-201ENST00000419650 NRXN1Q9ULB1 1477 aa12.53□□□□□ -0.4
GACAT1-201ENST00000419650 COL16A1Q07092 1604 aaPredicted RBP12.52□□□□□ -0.4
GACAT1-201ENST00000419650 MST1RQ04912 1400 aa12.52□□□□□ -0.41
GACAT1-201ENST00000419650 AHDC1Q5TGY3 1603 aaPredicted RBP12.51□□□□□ -0.41
GACAT1-201ENST00000419650 NHSL1Q5SYE7 1610 aa12.49□□□□□ -0.41
GACAT1-201ENST00000419650 TECPR2O15040 1411 aa12.49□□□□□ -0.41
GACAT1-201ENST00000419650 LRPPRCP42704 1394 aaKnown RBP12.49□□□□□ -0.41
GACAT1-201ENST00000419650 ILDR2Q71H61 639 aa12.49□□□□□ -0.41
GACAT1-201ENST00000419650 STK26Q9P289 416 aa12.49□□□□□ -0.41
GACAT1-201ENST00000419650 YTHDC2Q9H6S0 1430 aaKnown RBP12.48□□□□□ -0.41
GACAT1-201ENST00000419650 TMEM132EQ6IEE7 984 aa12.48□□□□□ -0.41
GACAT1-201ENST00000419650 BRINP3Q76B58 766 aa12.48□□□□□ -0.41
GACAT1-201ENST00000419650 CDC42BPGQ6DT37 1551 aa12.47□□□□□ -0.41
GACAT1-201ENST00000419650 CFAP70Q5T0N1 1121 aa12.46□□□□□ -0.41
GACAT1-201ENST00000419650 C14orf93Q9H972 538 aaKnown RBP12.46□□□□□ -0.41
GACAT1-201ENST00000419650 C1orf167Q5SNV9 1468 aa12.46□□□□□ -0.42
GACAT1-201ENST00000419650 ABCC11Q96J66 1382 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms