RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 SETD5Q9C0A6 1442 aa30.98■■■□□ 2.55
PKNOX1-202ENST00000418336 ALKQ9UM73 1620 aa30.97■■■□□ 2.55
PKNOX1-202ENST00000418336 SLC4A1APQ9BWU0 796 aaKnown RBP30.96■■■□□ 2.55
PKNOX1-202ENST00000418336 CHGAP10645 457 aaKnown RBP30.93■■■□□ 2.54
PKNOX1-202ENST00000418336 XIRP1Q702N8 1843 aaKnown RBP30.93■■■□□ 2.54
PKNOX1-202ENST00000418336 NWD1Q149M9 1564 aa30.92■■■□□ 2.54
PKNOX1-202ENST00000418336 ADAMTS13Q76LX8 1427 aa30.92■■■□□ 2.54
PKNOX1-202ENST00000418336 SLC26A8Q96RN1 970 aa30.92■■■□□ 2.54
PKNOX1-202ENST00000418336 NEXMIFQ5QGS0 1516 aa30.9■■■□□ 2.54
PKNOX1-202ENST00000418336 NRXN3Q9Y4C0 1643 aa30.89■■■□□ 2.54
PKNOX1-202ENST00000418336 FOXD1Q16676 465 aa30.89■■■□□ 2.54
PKNOX1-202ENST00000418336 RAB3GAP2Q9H2M9 1393 aa30.89■■■□□ 2.54
PKNOX1-202ENST00000418336 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.88■■■□□ 2.53
PKNOX1-202ENST00000418336 MPHOSPH9Q99550 1183 aa30.88■■■□□ 2.53
PKNOX1-202ENST00000418336 NUTM2DQ5VT03 806 aaPredicted RBP30.87■■■□□ 2.53
PKNOX1-202ENST00000418336 KIF1BO60333 1816 aa30.87■■■□□ 2.53
PKNOX1-202ENST00000418336 CHD2O14647 1828 aaKnown RBP30.84■■■□□ 2.53
PKNOX1-202ENST00000418336 KCNA6P17658 529 aa30.84■■■□□ 2.53
PKNOX1-202ENST00000418336 HDGFP51858 240 aaKnown RBP30.84■■■□□ 2.53
PKNOX1-202ENST00000418336 DIP2AQ14689 1571 aa30.83■■■□□ 2.53
PKNOX1-202ENST00000418336 SETBP1Q9Y6X0 1596 aa30.83■■■□□ 2.53
PKNOX1-202ENST00000418336 TBX22Q9Y458 520 aa30.82■■■□□ 2.52
PKNOX1-202ENST00000418336 UBAP1LF5GYI3 381 aa30.81■■■□□ 2.52
PKNOX1-202ENST00000418336 PPP1R15AO75807 674 aaPredicted RBP30.81■■■□□ 2.52
PKNOX1-202ENST00000418336 SENP3Q9H4L4 574 aaPredicted RBP30.8■■■□□ 2.52
PKNOX1-202ENST00000418336 NKTRP30414 1462 aaKnown RBP30.79■■■□□ 2.52
PKNOX1-202ENST00000418336 ACIN1Q9UKV3 1341 aaKnown RBP30.77■■■□□ 2.52
PKNOX1-202ENST00000418336 SPATA31E1Q6ZUB1 1445 aa30.75■■■□□ 2.51
PKNOX1-202ENST00000418336 PTPRUQ92729 1446 aa30.75■■■□□ 2.51
PKNOX1-202ENST00000418336 TMEM94Q12767 1356 aa30.74■■■□□ 2.51
PKNOX1-202ENST00000418336 ZNF326Q5BKZ1 582 aaKnown RBP30.73■■■□□ 2.51
PKNOX1-202ENST00000418336 PIK3R4Q99570 1358 aa30.73■■■□□ 2.51
PKNOX1-202ENST00000418336 PPLO60437 1756 aa30.73■■■□□ 2.51
PKNOX1-202ENST00000418336 HRCP23327 699 aa30.72■■■□□ 2.51
PKNOX1-202ENST00000418336 BCANQ96GW7 911 aa30.71■■■□□ 2.51
PKNOX1-202ENST00000418336 CCDC144AA2RUR9 1427 aa30.71■■■□□ 2.51
PKNOX1-202ENST00000418336 SETD1AO15047 1707 aaKnown RBP30.7■■■□□ 2.5
PKNOX1-202ENST00000418336 TOM1O60784 492 aa30.69■■■□□ 2.5
PKNOX1-202ENST00000418336 XRN1Q8IZH2 1706 aaKnown RBP30.68■■■□□ 2.5
PKNOX1-202ENST00000418336 RPGRIP1LQ68CZ1 1315 aa30.67■■■□□ 2.5
PKNOX1-202ENST00000418336 IFT172Q9UG01 1749 aa30.67■■■□□ 2.5
PKNOX1-202ENST00000418336 RBM33Q96EV2 1170 aaKnown RBP30.66■■■□□ 2.5
PKNOX1-202ENST00000418336 METP08581 1390 aa30.66■■■□□ 2.5
PKNOX1-202ENST00000418336 PROSER2Q86WR7 435 aaPredicted RBP30.63■■■□□ 2.49
PKNOX1-202ENST00000418336 ANKRD30BQ9BXX2 1392 aa30.61■■■□□ 2.49
PKNOX1-202ENST00000418336 PIP4K2BP78356 416 aa30.6■■■□□ 2.49
PKNOX1-202ENST00000418336 NCOA3Q9Y6Q9 1424 aa30.59■■■□□ 2.49
PKNOX1-202ENST00000418336 VGFO15240 615 aaPredicted RBP30.57■■■□□ 2.48
PKNOX1-202ENST00000418336 AMOTL2Q9Y2J4 779 aa30.57■■■□□ 2.48
PKNOX1-202ENST00000418336 ADGRF5Q8IZF2 1346 aa30.54■■■□□ 2.48
PKNOX1-202ENST00000418336 HSPA1LP34931 641 aa30.54■■■□□ 2.48
PKNOX1-202ENST00000418336 PRAG1Q86YV5 1406 aa30.53■■■□□ 2.48
PKNOX1-202ENST00000418336 FAM135BQ49AJ0 1406 aa30.5■■■□□ 2.47
PKNOX1-202ENST00000418336 RGL3Q3MIN7 710 aa30.5■■■□□ 2.47
PKNOX1-202ENST00000418336 NRXN1Q9ULB1 1477 aa30.5■■■□□ 2.47
PKNOX1-202ENST00000418336 SCAF1Q9H7N4 1312 aaKnown RBP30.49■■■□□ 2.47
PKNOX1-202ENST00000418336 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.49■■■□□ 2.47
PKNOX1-202ENST00000418336 PIK3C2GO75747 1445 aa30.48■■■□□ 2.47
PKNOX1-202ENST00000418336 MSH6P52701 1360 aa30.48■■■□□ 2.47
PKNOX1-202ENST00000418336 ASXL1Q8IXJ9 1541 aa30.47■■■□□ 2.47
PKNOX1-202ENST00000418336 MYOM2P54296 1465 aa30.44■■■□□ 2.46
PKNOX1-202ENST00000418336 ROBO1Q9Y6N7 1651 aa30.44■■■□□ 2.46
PKNOX1-202ENST00000418336 PTCH1Q13635 1447 aa30.44■■■□□ 2.46
PKNOX1-202ENST00000418336 ROBO2Q9HCK4 1378 aa30.41■■■□□ 2.46
PKNOX1-202ENST00000418336 C19orf44Q9H6X5 657 aa30.4■■■□□ 2.46
PKNOX1-202ENST00000418336 NALCNQ8IZF0 1738 aa30.39■■■□□ 2.46
PKNOX1-202ENST00000418336 DCCP43146 1447 aa30.39■■■□□ 2.45
PKNOX1-202ENST00000418336 SLAIN2Q9P270 581 aa30.38■■■□□ 2.45
PKNOX1-202ENST00000418336 ADGRL3Q9HAR2 1447 aa30.36■■■□□ 2.45
PKNOX1-202ENST00000418336 TECPR2O15040 1411 aa30.35■■■□□ 2.45
PKNOX1-202ENST00000418336 DHX57Q6P158 1386 aaKnown RBP30.34■■■□□ 2.45
PKNOX1-202ENST00000418336 KNDC1Q76NI1 1749 aa30.32■■■□□ 2.44
PKNOX1-202ENST00000418336 MST1RQ04912 1400 aa30.3■■■□□ 2.44
PKNOX1-202ENST00000418336 LRPPRCP42704 1394 aaKnown RBP30.3■■■□□ 2.44
PKNOX1-202ENST00000418336 CADPS2Q86UW7 1296 aa30.3■■■□□ 2.44
PKNOX1-202ENST00000418336 C14orf93Q9H972 538 aaKnown RBP30.3■■■□□ 2.44
PKNOX1-202ENST00000418336 LAMC1P11047 1609 aa30.29■■■□□ 2.44
PKNOX1-202ENST00000418336 C14orf37Q86TY3 774 aa30.28■■■□□ 2.44
PKNOX1-202ENST00000418336 ABCC11Q96J66 1382 aa30.27■■■□□ 2.44
PKNOX1-202ENST00000418336 TMEM132EQ6IEE7 984 aa30.26■■■□□ 2.43
PKNOX1-202ENST00000418336 ADGRB1O14514 1584 aa30.25■■■□□ 2.43
PKNOX1-202ENST00000418336 MED1Q15648 1581 aaPredicted RBP30.25■■■□□ 2.43
PKNOX1-202ENST00000418336 YTHDC2Q9H6S0 1430 aaKnown RBP30.25■■■□□ 2.43
PKNOX1-202ENST00000418336 ATF3P18847 181 aa30.25■■■□□ 2.43
PKNOX1-202ENST00000418336 CFAP70Q5T0N1 1121 aa30.25■■■□□ 2.43
PKNOX1-202ENST00000418336 COL16A1Q07092 1604 aaPredicted RBP30.24■■■□□ 2.43
PKNOX1-202ENST00000418336 AHDC1Q5TGY3 1603 aaPredicted RBP30.23■■■□□ 2.43
PKNOX1-202ENST00000418336 PHLPP1O60346 1717 aa30.22■■■□□ 2.43
PKNOX1-202ENST00000418336 PLEKHH1Q9ULM0 1364 aa30.21■■■□□ 2.43
PKNOX1-202ENST00000418336 BRINP3Q76B58 766 aa30.21■■■□□ 2.43
PKNOX1-202ENST00000418336 DISP3Q9P2K9 1392 aa30.19■■■□□ 2.42
PKNOX1-202ENST00000418336 DCAF11Q8TEB1 546 aa30.19■■■□□ 2.42
PKNOX1-202ENST00000418336 CDC42BPGQ6DT37 1551 aa30.18■■■□□ 2.42
PKNOX1-202ENST00000418336 WAPLQ7Z5K2 1190 aa30.17■■■□□ 2.42
PKNOX1-202ENST00000418336 C1orf167Q5SNV9 1468 aa30.17■■■□□ 2.42
PKNOX1-202ENST00000418336 STK26Q9P289 416 aa30.16■■■□□ 2.42
PKNOX1-202ENST00000418336 SIRT1Q96EB6 747 aa30.15■■■□□ 2.42
PKNOX1-202ENST00000418336 STAC3Q96MF2 364 aa30.15■■■□□ 2.42
PKNOX1-202ENST00000418336 NHSL1Q5SYE7 1610 aa30.14■■■□□ 2.42
PKNOX1-202ENST00000418336 TRIM26Q12899 539 aaPredicted RBP30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms