RNA–Protein interactions for RNA: ENST00000416995.1

LINC02558-201, Transcript of long intergenic non-protein coding RNA 2558, humanhuman

TSL 5

Gene LINC02558, Length 178 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02558-201ENST00000416995 PROSER2Q86WR7 435 aaPredicted RBP23.44■■□□□ 1.34
LINC02558-201ENST00000416995 RBM33Q96EV2 1170 aaKnown RBP23.44■■□□□ 1.34
LINC02558-201ENST00000416995 TMEM131LA2VDJ0 1609 aa23.44■■□□□ 1.34
LINC02558-201ENST00000416995 NWD1Q149M9 1564 aa23.43■■□□□ 1.34
LINC02558-201ENST00000416995 FAM135BQ49AJ0 1406 aa23.42■■□□□ 1.34
LINC02558-201ENST00000416995 BCANQ96GW7 911 aa23.42■■□□□ 1.34
LINC02558-201ENST00000416995 PHF23Q9BUL5 403 aaPredicted RBP23.42■■□□□ 1.34
LINC02558-201ENST00000416995 RIMS2Q9UQ26 1411 aa23.42■■□□□ 1.34
LINC02558-201ENST00000416995 E9PCH4 1651 aa23.41■■□□□ 1.34
LINC02558-201ENST00000416995 PLEKHG1Q9ULL1 1385 aa23.41■■□□□ 1.34
LINC02558-201ENST00000416995 NKTRP30414 1462 aaKnown RBP23.41■■□□□ 1.34
LINC02558-201ENST00000416995 IQGAP3Q86VI3 1631 aa23.39■■□□□ 1.33
LINC02558-201ENST00000416995 PPP1R15AO75807 674 aaPredicted RBP23.37■■□□□ 1.33
LINC02558-201ENST00000416995 ITGAEP38570 1179 aa23.37■■□□□ 1.33
LINC02558-201ENST00000416995 CHGAP10645 457 aaKnown RBP23.36■■□□□ 1.33
LINC02558-201ENST00000416995 HDGFP51858 240 aaKnown RBP23.36■■□□□ 1.33
LINC02558-201ENST00000416995 PPARGC1BQ86YN6 1023 aaKnown RBP23.36■■□□□ 1.33
LINC02558-201ENST00000416995 NUP155O75694 1391 aa23.35■■□□□ 1.33
LINC02558-201ENST00000416995 CHD2O14647 1828 aaKnown RBP23.35■■□□□ 1.33
LINC02558-201ENST00000416995 ROBO1Q9Y6N7 1651 aa23.35■■□□□ 1.33
LINC02558-201ENST00000416995 MSH6P52701 1360 aa23.32■■□□□ 1.32
LINC02558-201ENST00000416995 NUTM2DQ5VT03 806 aaPredicted RBP23.32■■□□□ 1.32
LINC02558-201ENST00000416995 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.32■■□□□ 1.32
LINC02558-201ENST00000416995 TBX22Q9Y458 520 aa23.32■■□□□ 1.32
LINC02558-201ENST00000416995 ADAMTS13Q76LX8 1427 aa23.3■■□□□ 1.32
LINC02558-201ENST00000416995 RGS17Q9UGC6 210 aaPredicted RBP23.29■■□□□ 1.32
LINC02558-201ENST00000416995 SLAIN2Q9P270 581 aa23.28■■□□□ 1.32
LINC02558-201ENST00000416995 DIP2AQ14689 1571 aa23.26■■□□□ 1.31
LINC02558-201ENST00000416995 NCOA3Q9Y6Q9 1424 aa23.24■■□□□ 1.31
LINC02558-201ENST00000416995 PIK3R4Q99570 1358 aa23.23■■□□□ 1.31
LINC02558-201ENST00000416995 PHLPP1O60346 1717 aa23.2■■□□□ 1.3
LINC02558-201ENST00000416995 SPHKAPQ2M3C7 1700 aa23.2■■□□□ 1.3
LINC02558-201ENST00000416995 PTPRUQ92729 1446 aa23.19■■□□□ 1.3
LINC02558-201ENST00000416995 TRPM2O94759 1503 aa23.18■■□□□ 1.3
LINC02558-201ENST00000416995 C14orf37Q86TY3 774 aa23.18■■□□□ 1.3
LINC02558-201ENST00000416995 RRBP1Q9P2E9 1410 aaKnown RBP23.17■■□□□ 1.3
LINC02558-201ENST00000416995 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.17■■□□□ 1.3
LINC02558-201ENST00000416995 AMOTL2Q9Y2J4 779 aa23.17■■□□□ 1.3
LINC02558-201ENST00000416995 NRXN3Q9Y4C0 1643 aa23.16■■□□□ 1.3
LINC02558-201ENST00000416995 C19orf44Q9H6X5 657 aa23.16■■□□□ 1.3
LINC02558-201ENST00000416995 POTEAQ6S8J7 498 aa23.15■■□□□ 1.3
LINC02558-201ENST00000416995 JCADQ9P266 1359 aa23.14■■□□□ 1.3
LINC02558-201ENST00000416995 SETBP1Q9Y6X0 1596 aa23.14■■□□□ 1.3
LINC02558-201ENST00000416995 CADPS2Q86UW7 1296 aa23.14■■□□□ 1.29
LINC02558-201ENST00000416995 COL16A1Q07092 1604 aaPredicted RBP23.14■■□□□ 1.29
LINC02558-201ENST00000416995 NAIPQ13075 1403 aa23.13■■□□□ 1.29
LINC02558-201ENST00000416995 ATF3P18847 181 aa23.12■■□□□ 1.29
LINC02558-201ENST00000416995 ZNF326Q5BKZ1 582 aaKnown RBP23.12■■□□□ 1.29
LINC02558-201ENST00000416995 CLTCL1P53675 1640 aa23.11■■□□□ 1.29
LINC02558-201ENST00000416995 XRN1Q8IZH2 1706 aaKnown RBP23.11■■□□□ 1.29
LINC02558-201ENST00000416995 METP08581 1390 aa23.09■■□□□ 1.29
LINC02558-201ENST00000416995 AHDC1Q5TGY3 1603 aaPredicted RBP23.08■■□□□ 1.29
LINC02558-201ENST00000416995 NEXMIFQ5QGS0 1516 aa23.08■■□□□ 1.28
LINC02558-201ENST00000416995 BRINP3Q76B58 766 aa23.05■■□□□ 1.28
LINC02558-201ENST00000416995 DCCP43146 1447 aa23.05■■□□□ 1.28
LINC02558-201ENST00000416995 LRP6O75581 1613 aa23.04■■□□□ 1.28
LINC02558-201ENST00000416995 SPATA31A6Q5VVP1 1343 aa23.03■■□□□ 1.28
LINC02558-201ENST00000416995 HFM1A2PYH4 1435 aa23.02■■□□□ 1.28
LINC02558-201ENST00000416995 KIF1BO60333 1816 aa23.02■■□□□ 1.28
LINC02558-201ENST00000416995 MST1RQ04912 1400 aa23■■□□□ 1.27
LINC02558-201ENST00000416995 SHPRHQ149N8 1683 aa23■■□□□ 1.27
LINC02558-201ENST00000416995 TRIM52Q96A61 297 aa23■■□□□ 1.27
LINC02558-201ENST00000416995 ASXL1Q8IXJ9 1541 aa22.99■■□□□ 1.27
LINC02558-201ENST00000416995 ADGRL3Q9HAR2 1447 aa22.97■■□□□ 1.27
LINC02558-201ENST00000416995 MEX3CQ5U5Q3 659 aaKnown RBP22.95■■□□□ 1.26
LINC02558-201ENST00000416995 NALCNQ8IZF0 1738 aa22.95■■□□□ 1.26
LINC02558-201ENST00000416995 SLC4A1APQ9BWU0 796 aaKnown RBP22.95■■□□□ 1.26
LINC02558-201ENST00000416995 SETD1AO15047 1707 aaKnown RBP22.94■■□□□ 1.26
LINC02558-201ENST00000416995 NHSL1Q5SYE7 1610 aa22.93■■□□□ 1.26
LINC02558-201ENST00000416995 VGFO15240 615 aaPredicted RBP22.93■■□□□ 1.26
LINC02558-201ENST00000416995 SETD5Q9C0A6 1442 aa22.92■■□□□ 1.26
LINC02558-201ENST00000416995 PTCH1Q13635 1447 aa22.91■■□□□ 1.26
LINC02558-201ENST00000416995 ROBO2Q9HCK4 1378 aa22.9■■□□□ 1.26
LINC02558-201ENST00000416995 RPGRIP1LQ68CZ1 1315 aa22.9■■□□□ 1.26
LINC02558-201ENST00000416995 NUTM2BA6NNL0 878 aaPredicted RBP22.9■■□□□ 1.26
LINC02558-201ENST00000416995 NUTM2EB1AL46 878 aaPredicted RBP22.9■■□□□ 1.26
LINC02558-201ENST00000416995 ZNF772Q68DY9 489 aaPredicted RBP22.9■■□□□ 1.26
LINC02558-201ENST00000416995 NUTM2AQ8IVF1 878 aaPredicted RBP22.9■■□□□ 1.26
LINC02558-201ENST00000416995 DDX17Q92841 729 aaKnown RBP22.9■■□□□ 1.26
LINC02558-201ENST00000416995 FOXD1Q16676 465 aa22.88■■□□□ 1.25
LINC02558-201ENST00000416995 PPLO60437 1756 aa22.88■■□□□ 1.25
LINC02558-201ENST00000416995 PRAG1Q86YV5 1406 aa22.87■■□□□ 1.25
LINC02558-201ENST00000416995 C1orf167Q5SNV9 1468 aa22.86■■□□□ 1.25
LINC02558-201ENST00000416995 LRRC59Q96AG4 307 aaKnown RBP22.86■■□□□ 1.25
LINC02558-201ENST00000416995 PNPLA6Q8IY17 1366 aa22.83■■□□□ 1.25
LINC02558-201ENST00000416995 LAMC1P11047 1609 aa22.81■■□□□ 1.24
LINC02558-201ENST00000416995 AFF2P51816 1311 aa22.81■■□□□ 1.24
LINC02558-201ENST00000416995 ORAI2Q96SN7 254 aa22.8■■□□□ 1.24
LINC02558-201ENST00000416995 ADGRF5Q8IZF2 1346 aa22.8■■□□□ 1.24
LINC02558-201ENST00000416995 RXRBP28702 533 aa22.79■■□□□ 1.24
LINC02558-201ENST00000416995 CCDC144AA2RUR9 1427 aa22.79■■□□□ 1.24
LINC02558-201ENST00000416995 SPATA31E1Q6ZUB1 1445 aa22.78■■□□□ 1.24
LINC02558-201ENST00000416995 MPHOSPH9Q99550 1183 aa22.78■■□□□ 1.24
LINC02558-201ENST00000416995 SOS2Q07890 1332 aaPredicted RBP22.77■■□□□ 1.24
LINC02558-201ENST00000416995 RGL3Q3MIN7 710 aa22.76■■□□□ 1.23
LINC02558-201ENST00000416995 C8orf37Q96NL8 207 aa22.76■■□□□ 1.23
LINC02558-201ENST00000416995 CDK12Q9NYV4 1490 aaPredicted RBP22.74■■□□□ 1.23
LINC02558-201ENST00000416995 IFT172Q9UG01 1749 aa22.74■■□□□ 1.23
LINC02558-201ENST00000416995 UPF1Q92900 1129 aaKnown RBP eCLIP22.73■■□□□ 1.23
LINC02558-201ENST00000416995 ANKRD30BQ9BXX2 1392 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms