RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 IFFO2Q5TF58 517 aa13.14□□□□□ -0.31
COL12A1-203ENST00000416123 E9PSI1 815 aa13.14□□□□□ -0.31
COL12A1-203ENST00000416123 ST18O60284 1047 aa13.14□□□□□ -0.31
COL12A1-203ENST00000416123 AIMP1Q12904 312 aaKnown RBP13.14□□□□□ -0.31
COL12A1-203ENST00000416123 PDE3BQ13370 1112 aa13.14□□□□□ -0.31
COL12A1-203ENST00000416123 SYAP1Q96A49 352 aaPredicted RBP13.14□□□□□ -0.31
COL12A1-203ENST00000416123 ZKSCAN2Q63HK3 967 aa13.14□□□□□ -0.31
COL12A1-203ENST00000416123 VPS37DQ86XT2 251 aa13.14□□□□□ -0.31
COL12A1-203ENST00000416123 PRKRIP1Q9H875 184 aaPredicted RBP13.13□□□□□ -0.31
COL12A1-203ENST00000416123 TPM4P67936 248 aa13.13□□□□□ -0.31
COL12A1-203ENST00000416123 GGNBP2Q9H3C7 697 aa13.13□□□□□ -0.31
COL12A1-203ENST00000416123 APPP05067 770 aa13.13□□□□□ -0.31
COL12A1-203ENST00000416123 SF3A1Q15459 793 aaKnown RBP13.13□□□□□ -0.31
COL12A1-203ENST00000416123 KIF21BO75037 1637 aa13.12□□□□□ -0.31
COL12A1-203ENST00000416123 FGD6Q6ZV73 1430 aa13.12□□□□□ -0.31
COL12A1-203ENST00000416123 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.12□□□□□ -0.31
COL12A1-203ENST00000416123 PES1O00541 588 aaKnown RBP13.12□□□□□ -0.31
COL12A1-203ENST00000416123 ZNF428Q96B54 188 aa13.12□□□□□ -0.31
COL12A1-203ENST00000416123 AFAP1Q8N556 730 aa13.12□□□□□ -0.31
COL12A1-203ENST00000416123 TSPYL4Q9UJ04 414 aa13.12□□□□□ -0.31
COL12A1-203ENST00000416123 RRP1P56182 461 aaKnown RBP13.11□□□□□ -0.31
COL12A1-203ENST00000416123 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.11□□□□□ -0.31
COL12A1-203ENST00000416123 TRIM34Q9BYJ4 488 aa13.11□□□□□ -0.31
COL12A1-203ENST00000416123 SYNJ1O43426 1573 aa13.11□□□□□ -0.31
COL12A1-203ENST00000416123 PTMSP20962 102 aa13.11□□□□□ -0.31
COL12A1-203ENST00000416123 FKBP5Q13451 457 aaPredicted RBP13.11□□□□□ -0.31
COL12A1-203ENST00000416123 FAM184AQ8NB25 1140 aa13.11□□□□□ -0.31
COL12A1-203ENST00000416123 PRM3Q9NNZ6 103 aa13.11□□□□□ -0.31
COL12A1-203ENST00000416123 LRRC9Q6ZRR7 1453 aa13.11□□□□□ -0.31
COL12A1-203ENST00000416123 MCTP1Q6DN14 999 aa13.1□□□□□ -0.31
COL12A1-203ENST00000416123 SAMD1Q6SPF0 538 aaPredicted RBP13.1□□□□□ -0.31
COL12A1-203ENST00000416123 DIAPH3Q9NSV4 1193 aa13.09□□□□□ -0.31
COL12A1-203ENST00000416123 IPO9Q96P70 1041 aaKnown RBP13.09□□□□□ -0.31
COL12A1-203ENST00000416123 NLRP2Q9NX02 1062 aa13.09□□□□□ -0.31
COL12A1-203ENST00000416123 NCOA2Q15596 1464 aa13.09□□□□□ -0.31
COL12A1-203ENST00000416123 NOL10Q9BSC4 688 aaKnown RBP13.09□□□□□ -0.31
COL12A1-203ENST00000416123 FOSBP53539 338 aa13.09□□□□□ -0.31
COL12A1-203ENST00000416123 CSPP1Q1MSJ5 1256 aa13.09□□□□□ -0.31
COL12A1-203ENST00000416123 ESCO1Q5FWF5 840 aa13.09□□□□□ -0.31
COL12A1-203ENST00000416123 CENPQQ7L2Z9 268 aaPredicted RBP13.09□□□□□ -0.31
COL12A1-203ENST00000416123 AKAP17AQ02040 695 aaKnown RBP13.08□□□□□ -0.31
COL12A1-203ENST00000416123 ABTB2Q8N961 1025 aa13.08□□□□□ -0.32
COL12A1-203ENST00000416123 IFIT2P09913 472 aaKnown RBP13.08□□□□□ -0.32
COL12A1-203ENST00000416123 FAM177BA6PVY3 158 aa13.08□□□□□ -0.32
COL12A1-203ENST00000416123 RAPGEF4Q8WZA2 1011 aa13.08□□□□□ -0.32
COL12A1-203ENST00000416123 PRG4Q92954 1404 aaPredicted RBP13.07□□□□□ -0.32
COL12A1-203ENST00000416123 FYB1O15117 783 aa13.07□□□□□ -0.32
COL12A1-203ENST00000416123 RIC3Q7Z5B4 369 aa13.07□□□□□ -0.32
COL12A1-203ENST00000416123 GRIN2BQ13224 1484 aa13.07□□□□□ -0.32
COL12A1-203ENST00000416123 GOLGA6L3A6NEY3 463 aa13.07□□□□□ -0.32
COL12A1-203ENST00000416123 RUNDC1Q96C34 613 aa13.07□□□□□ -0.32
COL12A1-203ENST00000416123 ANO2Q9NQ90 1003 aa13.07□□□□□ -0.32
COL12A1-203ENST00000416123 TSHZ2Q9NRE2 1034 aa13.07□□□□□ -0.32
COL12A1-203ENST00000416123 NLRP6P59044 892 aa13.06□□□□□ -0.32
COL12A1-203ENST00000416123 WWC1Q8IX03 1113 aa13.06□□□□□ -0.32
COL12A1-203ENST00000416123 STRN4Q9NRL3 753 aa13.06□□□□□ -0.32
COL12A1-203ENST00000416123 SUPT6HQ7KZ85 1726 aaKnown RBP13.06□□□□□ -0.32
COL12A1-203ENST00000416123 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
COL12A1-203ENST00000416123 TPD52L1Q16890 204 aaPredicted RBP13.06□□□□□ -0.32
COL12A1-203ENST00000416123 CCDC34Q96HJ3 373 aa13.06□□□□□ -0.32
COL12A1-203ENST00000416123 ANKRD50Q9ULJ7 1429 aa13.06□□□□□ -0.32
COL12A1-203ENST00000416123 SYNJ2O15056 1496 aa13.05□□□□□ -0.32
COL12A1-203ENST00000416123 CFTRP13569 1480 aa13.05□□□□□ -0.32
COL12A1-203ENST00000416123 AMOTL1Q8IY63 956 aa13.05□□□□□ -0.32
COL12A1-203ENST00000416123 SYNE3Q6ZMZ3 975 aa13.04□□□□□ -0.32
COL12A1-203ENST00000416123 TXNDC2Q86VQ3 553 aa13.04□□□□□ -0.32
COL12A1-203ENST00000416123 ZBED9Q6R2W3 1325 aa13.04□□□□□ -0.32
COL12A1-203ENST00000416123 MIA2Q96PC5 1412 aa13.04□□□□□ -0.32
COL12A1-203ENST00000416123 DHX16O60231 1041 aaKnown RBP13.04□□□□□ -0.32
COL12A1-203ENST00000416123 FYCO1Q9BQS8 1478 aa13.04□□□□□ -0.32
COL12A1-203ENST00000416123 CTDP1Q9Y5B0 961 aaPredicted RBP13.04□□□□□ -0.32
COL12A1-203ENST00000416123 G3BP1Q13283 466 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL12A1-203ENST00000416123 DZIP1LQ8IYY4 767 aaKnown RBP13.04□□□□□ -0.32
COL12A1-203ENST00000416123 TCEAL9Q9UHQ7 104 aa13.04□□□□□ -0.32
COL12A1-203ENST00000416123 KDM4AO75164 1064 aa13.03□□□□□ -0.32
COL12A1-203ENST00000416123 FAM161AQ3B820 660 aa13.03□□□□□ -0.32
COL12A1-203ENST00000416123 CFAP70Q5T0N1 1121 aa13.03□□□□□ -0.32
COL12A1-203ENST00000416123 KIF7Q2M1P5 1343 aa13.03□□□□□ -0.32
COL12A1-203ENST00000416123 NEUROD6Q96NK8 337 aa13.03□□□□□ -0.32
COL12A1-203ENST00000416123 PRAM1Q96QH2 718 aa13.03□□□□□ -0.32
COL12A1-203ENST00000416123 NUTM2BA6NNL0 878 aaPredicted RBP13.03□□□□□ -0.32
COL12A1-203ENST00000416123 NUTM2EB1AL46 878 aaPredicted RBP13.03□□□□□ -0.32
COL12A1-203ENST00000416123 NUTM2AQ8IVF1 878 aaPredicted RBP13.03□□□□□ -0.32
COL12A1-203ENST00000416123 DDX19BQ9UMR2 479 aa13.03□□□□□ -0.32
COL12A1-203ENST00000416123 PDE4AP27815 886 aa13.02□□□□□ -0.32
COL12A1-203ENST00000416123 CCDC27Q2M243 656 aa13.02□□□□□ -0.32
COL12A1-203ENST00000416123 KIF3AQ9Y496 699 aa13.02□□□□□ -0.32
COL12A1-203ENST00000416123 RBM33Q96EV2 1170 aaKnown RBP13.02□□□□□ -0.33
COL12A1-203ENST00000416123 MTHFSP49914 203 aa13.02□□□□□ -0.33
COL12A1-203ENST00000416123 PANK1Q8TE04 598 aa13.02□□□□□ -0.33
COL12A1-203ENST00000416123 MTMR7Q9Y216 660 aa13.02□□□□□ -0.33
COL12A1-203ENST00000416123 MRC2Q9UBG0 1479 aa13.01□□□□□ -0.33
COL12A1-203ENST00000416123 PHF14O94880 888 aa13.01□□□□□ -0.33
COL12A1-203ENST00000416123 NFXL1Q6ZNB6 911 aa13.01□□□□□ -0.33
COL12A1-203ENST00000416123 SNAPC4Q5SXM2 1469 aa13.01□□□□□ -0.33
COL12A1-203ENST00000416123 LNPKQ9C0E8 428 aa13.01□□□□□ -0.33
COL12A1-203ENST00000416123 CASKIN1Q8WXD9 1431 aa13.01□□□□□ -0.33
COL12A1-203ENST00000416123 HECW1Q76N89 1606 aa13.01□□□□□ -0.33
COL12A1-203ENST00000416123 RRBP1Q9P2E9 1410 aaKnown RBP13□□□□□ -0.33
COL12A1-203ENST00000416123 CCDC7Q96M83 1385 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms