RNA–Protein interactions for RNA: ENST00000415548.1

CCT3-208, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 3

Gene CCT3, Length 513 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-208ENST00000415548 ZFYVE9O95405 1425 aa12.55□□□□□ -0.4
CCT3-208ENST00000415548 RIMS2Q9UQ26 1411 aa12.55□□□□□ -0.4
CCT3-208ENST00000415548 SLC4A1APQ9BWU0 796 aaKnown RBP12.55□□□□□ -0.4
CCT3-208ENST00000415548 CPS1P31327 1500 aa12.55□□□□□ -0.4
CCT3-208ENST00000415548 STRCP1A6NGW2 1772 aa12.55□□□□□ -0.4
CCT3-208ENST00000415548 TRPM2O94759 1503 aa12.54□□□□□ -0.4
CCT3-208ENST00000415548 SETD5Q9C0A6 1442 aa12.54□□□□□ -0.4
CCT3-208ENST00000415548 CLTCL1P53675 1640 aa12.53□□□□□ -0.4
CCT3-208ENST00000415548 PPP1R15AO75807 674 aaPredicted RBP12.53□□□□□ -0.4
CCT3-208ENST00000415548 NUTM2DQ5VT03 806 aaPredicted RBP12.53□□□□□ -0.4
CCT3-208ENST00000415548 BCANQ96GW7 911 aa12.53□□□□□ -0.4
CCT3-208ENST00000415548 SLC26A8Q96RN1 970 aa12.53□□□□□ -0.4
CCT3-208ENST00000415548 HDGFP51858 240 aaKnown RBP12.52□□□□□ -0.41
CCT3-208ENST00000415548 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.51□□□□□ -0.41
CCT3-208ENST00000415548 PLEKHG1Q9ULL1 1385 aa12.51□□□□□ -0.41
CCT3-208ENST00000415548 UBAP1LF5GYI3 381 aa12.5□□□□□ -0.41
CCT3-208ENST00000415548 MPHOSPH9Q99550 1183 aa12.5□□□□□ -0.41
CCT3-208ENST00000415548 LRRC7Q96NW7 1537 aa12.5□□□□□ -0.41
CCT3-208ENST00000415548 RAB3GAP2Q9H2M9 1393 aa12.49□□□□□ -0.41
CCT3-208ENST00000415548 ZNF326Q5BKZ1 582 aaKnown RBP12.49□□□□□ -0.41
CCT3-208ENST00000415548 KIF1BO60333 1816 aa12.48□□□□□ -0.41
CCT3-208ENST00000415548 KCNA6P17658 529 aa12.47□□□□□ -0.41
CCT3-208ENST00000415548 ADAMTS13Q76LX8 1427 aa12.46□□□□□ -0.41
CCT3-208ENST00000415548 ACIN1Q9UKV3 1341 aaKnown RBP12.46□□□□□ -0.41
CCT3-208ENST00000415548 TBX22Q9Y458 520 aa12.46□□□□□ -0.41
CCT3-208ENST00000415548 NWD1Q149M9 1564 aa12.45□□□□□ -0.42
CCT3-208ENST00000415548 NEXMIFQ5QGS0 1516 aa12.45□□□□□ -0.42
CCT3-208ENST00000415548 XIRP1Q702N8 1843 aaKnown RBP12.44□□□□□ -0.42
CCT3-208ENST00000415548 TOM1O60784 492 aa12.44□□□□□ -0.42
CCT3-208ENST00000415548 CHD2O14647 1828 aaKnown RBP12.44□□□□□ -0.42
CCT3-208ENST00000415548 DIP2AQ14689 1571 aa12.43□□□□□ -0.42
CCT3-208ENST00000415548 PIP4K2BP78356 416 aa12.43□□□□□ -0.42
CCT3-208ENST00000415548 PROSER2Q86WR7 435 aaPredicted RBP12.43□□□□□ -0.42
CCT3-208ENST00000415548 RBM33Q96EV2 1170 aaKnown RBP12.43□□□□□ -0.42
CCT3-208ENST00000415548 ALKQ9UM73 1620 aa12.43□□□□□ -0.42
CCT3-208ENST00000415548 NRXN3Q9Y4C0 1643 aa12.43□□□□□ -0.42
CCT3-208ENST00000415548 CCDC144AA2RUR9 1427 aa12.43□□□□□ -0.42
CCT3-208ENST00000415548 TMEM94Q12767 1356 aa12.43□□□□□ -0.42
CCT3-208ENST00000415548 SCAF1Q9H7N4 1312 aaKnown RBP12.42□□□□□ -0.42
CCT3-208ENST00000415548 NKTRP30414 1462 aaKnown RBP12.42□□□□□ -0.42
CCT3-208ENST00000415548 SETBP1Q9Y6X0 1596 aa12.42□□□□□ -0.42
CCT3-208ENST00000415548 RPGRIP1LQ68CZ1 1315 aa12.4□□□□□ -0.42
CCT3-208ENST00000415548 PIK3R4Q99570 1358 aa12.4□□□□□ -0.42
CCT3-208ENST00000415548 SPATA31E1Q6ZUB1 1445 aa12.39□□□□□ -0.43
CCT3-208ENST00000415548 PTPRUQ92729 1446 aa12.39□□□□□ -0.43
CCT3-208ENST00000415548 PPLO60437 1756 aa12.39□□□□□ -0.43
CCT3-208ENST00000415548 HRCP23327 699 aa12.39□□□□□ -0.43
CCT3-208ENST00000415548 RGL3Q3MIN7 710 aa12.39□□□□□ -0.43
CCT3-208ENST00000415548 VGFO15240 615 aaPredicted RBP12.38□□□□□ -0.43
CCT3-208ENST00000415548 AMOTL2Q9Y2J4 779 aa12.38□□□□□ -0.43
CCT3-208ENST00000415548 METP08581 1390 aa12.38□□□□□ -0.43
CCT3-208ENST00000415548 HSPA1LP34931 641 aa12.36□□□□□ -0.43
CCT3-208ENST00000415548 MSH6P52701 1360 aa12.35□□□□□ -0.43
CCT3-208ENST00000415548 ANKRD30BQ9BXX2 1392 aa12.35□□□□□ -0.43
CCT3-208ENST00000415548 XRN1Q8IZH2 1706 aaKnown RBP12.35□□□□□ -0.43
CCT3-208ENST00000415548 ADGRF5Q8IZF2 1346 aa12.35□□□□□ -0.43
CCT3-208ENST00000415548 SETD1AO15047 1707 aaKnown RBP12.34□□□□□ -0.43
CCT3-208ENST00000415548 IFT172Q9UG01 1749 aa12.34□□□□□ -0.43
CCT3-208ENST00000415548 C14orf37Q86TY3 774 aa12.34□□□□□ -0.43
CCT3-208ENST00000415548 NCOA3Q9Y6Q9 1424 aa12.33□□□□□ -0.44
CCT3-208ENST00000415548 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.31□□□□□ -0.44
CCT3-208ENST00000415548 FAM135BQ49AJ0 1406 aa12.3□□□□□ -0.44
CCT3-208ENST00000415548 C19orf44Q9H6X5 657 aa12.3□□□□□ -0.44
CCT3-208ENST00000415548 PIK3C2GO75747 1445 aa12.29□□□□□ -0.44
CCT3-208ENST00000415548 ROBO1Q9Y6N7 1651 aa12.29□□□□□ -0.44
CCT3-208ENST00000415548 SLAIN2Q9P270 581 aa12.29□□□□□ -0.44
CCT3-208ENST00000415548 ROBO2Q9HCK4 1378 aa12.29□□□□□ -0.44
CCT3-208ENST00000415548 ATF3P18847 181 aa12.28□□□□□ -0.44
CCT3-208ENST00000415548 PTCH1Q13635 1447 aa12.28□□□□□ -0.44
CCT3-208ENST00000415548 MYOM2P54296 1465 aa12.27□□□□□ -0.44
CCT3-208ENST00000415548 NRXN1Q9ULB1 1477 aa12.27□□□□□ -0.44
CCT3-208ENST00000415548 CADPS2Q86UW7 1296 aa12.27□□□□□ -0.45
CCT3-208ENST00000415548 ASXL1Q8IXJ9 1541 aa12.27□□□□□ -0.45
CCT3-208ENST00000415548 NALCNQ8IZF0 1738 aa12.26□□□□□ -0.45
CCT3-208ENST00000415548 TMEM132EQ6IEE7 984 aa12.26□□□□□ -0.45
CCT3-208ENST00000415548 STK26Q9P289 416 aa12.26□□□□□ -0.45
CCT3-208ENST00000415548 PRAG1Q86YV5 1406 aa12.26□□□□□ -0.45
CCT3-208ENST00000415548 ADGRL3Q9HAR2 1447 aa12.26□□□□□ -0.45
CCT3-208ENST00000415548 C14orf93Q9H972 538 aaKnown RBP12.25□□□□□ -0.45
CCT3-208ENST00000415548 DISP3Q9P2K9 1392 aa12.25□□□□□ -0.45
CCT3-208ENST00000415548 DCCP43146 1447 aa12.25□□□□□ -0.45
CCT3-208ENST00000415548 LRPPRCP42704 1394 aaKnown RBP12.24□□□□□ -0.45
CCT3-208ENST00000415548 CFAP70Q5T0N1 1121 aa12.24□□□□□ -0.45
CCT3-208ENST00000415548 DHX57Q6P158 1386 aaKnown RBP12.24□□□□□ -0.45
CCT3-208ENST00000415548 DCAF11Q8TEB1 546 aa12.24□□□□□ -0.45
CCT3-208ENST00000415548 KDM2AQ9Y2K7 1162 aa12.24□□□□□ -0.45
CCT3-208ENST00000415548 MST1RQ04912 1400 aa12.23□□□□□ -0.45
CCT3-208ENST00000415548 TRIM26Q12899 539 aaPredicted RBP12.23□□□□□ -0.45
CCT3-208ENST00000415548 LAMC1P11047 1609 aa12.22□□□□□ -0.45
CCT3-208ENST00000415548 TECPR2O15040 1411 aa12.22□□□□□ -0.45
CCT3-208ENST00000415548 YTHDC2Q9H6S0 1430 aaKnown RBP12.22□□□□□ -0.45
CCT3-208ENST00000415548 ABCC11Q96J66 1382 aa12.22□□□□□ -0.45
CCT3-208ENST00000415548 WAPLQ7Z5K2 1190 aa12.22□□□□□ -0.45
CCT3-208ENST00000415548 PHLPP1O60346 1717 aa12.22□□□□□ -0.45
CCT3-208ENST00000415548 KNDC1Q76NI1 1749 aa12.22□□□□□ -0.45
CCT3-208ENST00000415548 BRINP3Q76B58 766 aa12.21□□□□□ -0.45
CCT3-208ENST00000415548 MED1Q15648 1581 aaPredicted RBP12.21□□□□□ -0.46
CCT3-208ENST00000415548 PLEKHH1Q9ULM0 1364 aa12.2□□□□□ -0.46
CCT3-208ENST00000415548 COL16A1Q07092 1604 aaPredicted RBP12.19□□□□□ -0.46
CCT3-208ENST00000415548 AHDC1Q5TGY3 1603 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms