RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 AXIN2Q9Y2T1 843 aa14.16□□□□□ -0.14
TRA2B-204ENST00000414862 GAPVD1Q14C86 1478 aa14.16□□□□□ -0.14
TRA2B-204ENST00000414862 IRF6O14896 467 aa14.15□□□□□ -0.14
TRA2B-204ENST00000414862 PADI6Q6TGC4 694 aa14.15□□□□□ -0.14
TRA2B-204ENST00000414862 CDCA7LQ96GN5 454 aa14.15□□□□□ -0.14
TRA2B-204ENST00000414862 RBM27Q9P2N5 1060 aaKnown RBP14.15□□□□□ -0.14
TRA2B-204ENST00000414862 PBX2P40425 430 aa14.14□□□□□ -0.15
TRA2B-204ENST00000414862 CCDC102AQ96A19 550 aa14.12□□□□□ -0.15
TRA2B-204ENST00000414862 TTC13Q8NBP0 860 aa14.11□□□□□ -0.15
TRA2B-204ENST00000414862 CUX1P39880 1505 aa14.1□□□□□ -0.15
TRA2B-204ENST00000414862 DMRTA1Q5VZB9 504 aa14.09□□□□□ -0.15
TRA2B-204ENST00000414862 ZBED2Q9BTP6 218 aa14.09□□□□□ -0.15
TRA2B-204ENST00000414862 PROX2Q3B8N5 592 aa14.08□□□□□ -0.16
TRA2B-204ENST00000414862 FAM198AQ9UFP1 575 aa14.08□□□□□ -0.16
TRA2B-204ENST00000414862 TSKSQ9UJT2 592 aa14.08□□□□□ -0.16
TRA2B-204ENST00000414862 TRIM6-TRIM34B2RNG4 842 aa14.07□□□□□ -0.16
TRA2B-204ENST00000414862 FAM161AQ3B820 660 aa14.07□□□□□ -0.16
TRA2B-204ENST00000414862 TRIM66O15016 1216 aa14.06□□□□□ -0.16
TRA2B-204ENST00000414862 ADGRG1Q9Y653 693 aa14.05□□□□□ -0.16
TRA2B-204ENST00000414862 PBRM1Q86U86 1689 aa14.04□□□□□ -0.16
TRA2B-204ENST00000414862 ONECUT3O60422 494 aaPredicted RBP14.04□□□□□ -0.16
TRA2B-204ENST00000414862 PACS2Q86VP3 889 aa14.04□□□□□ -0.16
TRA2B-204ENST00000414862 SLC4A5Q9BY07 1137 aa14.04□□□□□ -0.16
TRA2B-204ENST00000414862 OATP04181 439 aa14.03□□□□□ -0.16
TRA2B-204ENST00000414862 ABCA10Q8WWZ4 1543 aa14.01□□□□□ -0.17
TRA2B-204ENST00000414862 KIAA1468Q9P260 1216 aa14.01□□□□□ -0.17
TRA2B-204ENST00000414862 ABCA5Q8WWZ7 1642 aa14.01□□□□□ -0.17
TRA2B-204ENST00000414862 GRIN2AQ12879 1464 aa14□□□□□ -0.17
TRA2B-204ENST00000414862 METTL3Q86U44 580 aaKnown RBP14□□□□□ -0.17
TRA2B-204ENST00000414862 VPS9D1Q9Y2B5 631 aa14□□□□□ -0.17
TRA2B-204ENST00000414862 NBPF26B4DH59 902 aa13.99□□□□□ -0.17
TRA2B-204ENST00000414862 LSM11P83369 360 aaKnown RBP eCLIP13.99□□□□□ -0.17
TRA2B-204ENST00000414862 PDE4DQ08499 809 aa13.99□□□□□ -0.17
TRA2B-204ENST00000414862 POTEGQ6S5H5 508 aa13.99□□□□□ -0.17
TRA2B-204ENST00000414862 NUDT18Q6ZVK8 323 aa13.99□□□□□ -0.17
TRA2B-204ENST00000414862 RBM46Q8TBY0 533 aaKnown RBP13.99□□□□□ -0.17
TRA2B-204ENST00000414862 PXYLP1Q8TE99 480 aa13.99□□□□□ -0.17
TRA2B-204ENST00000414862 TATDN2Q93075 761 aa13.99□□□□□ -0.17
TRA2B-204ENST00000414862 PNMA3Q9UL41 463 aa13.99□□□□□ -0.17
TRA2B-204ENST00000414862 C3orf80F5H4A9 247 aa13.98□□□□□ -0.17
TRA2B-204ENST00000414862 RABGEF1Q9UJ41 708 aa13.98□□□□□ -0.17
TRA2B-204ENST00000414862 ERCC6L2Q5T890 1561 aa13.97□□□□□ -0.17
TRA2B-204ENST00000414862 POTEMA6NI47 508 aa13.97□□□□□ -0.17
TRA2B-204ENST00000414862 BRPF1P55201 1214 aaPredicted RBP13.97□□□□□ -0.17
TRA2B-204ENST00000414862 PHOX2BQ99453 314 aa13.97□□□□□ -0.17
TRA2B-204ENST00000414862 CEP170Q5SW79 1584 aa13.96□□□□□ -0.17
TRA2B-204ENST00000414862 TK2O00142 265 aa13.96□□□□□ -0.17
TRA2B-204ENST00000414862 NEUROD2Q15784 382 aa13.96□□□□□ -0.17
TRA2B-204ENST00000414862 AMHR2Q16671 573 aa13.96□□□□□ -0.17
TRA2B-204ENST00000414862 EYA1Q99502 592 aa13.96□□□□□ -0.17
TRA2B-204ENST00000414862 NUP160Q12769 1436 aa13.96□□□□□ -0.18
TRA2B-204ENST00000414862 SMAPO00193 183 aa13.95□□□□□ -0.18
TRA2B-204ENST00000414862 ADAMTS12P58397 1594 aa13.95□□□□□ -0.18
TRA2B-204ENST00000414862 ADGRD1Q6QNK2 874 aa13.93□□□□□ -0.18
TRA2B-204ENST00000414862 ANKRD13DQ6ZTN6 518 aa13.93□□□□□ -0.18
TRA2B-204ENST00000414862 TTLL12Q14166 644 aaPredicted RBP13.91□□□□□ -0.18
TRA2B-204ENST00000414862 NLRP7Q8WX94 980 aa13.91□□□□□ -0.18
TRA2B-204ENST00000414862 GPBP1L1Q9HC44 474 aaPredicted RBP13.91□□□□□ -0.18
TRA2B-204ENST00000414862 FHAD1B1AJZ9 1412 aa13.9□□□□□ -0.18
TRA2B-204ENST00000414862 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.18
TRA2B-204ENST00000414862 SHROOM2Q13796 1616 aa13.9□□□□□ -0.18
TRA2B-204ENST00000414862 RCCD1A6NED2 376 aa13.9□□□□□ -0.18
TRA2B-204ENST00000414862 MDM2Q00987 491 aaPredicted RBP13.9□□□□□ -0.18
TRA2B-204ENST00000414862 KRTAP3-3Q9BYR6 98 aa13.9□□□□□ -0.18
TRA2B-204ENST00000414862 KRTAP3-2Q9BYR7 98 aa13.9□□□□□ -0.18
TRA2B-204ENST00000414862 SEPT9Q9UHD8 586 aaPredicted RBP13.9□□□□□ -0.18
TRA2B-204ENST00000414862 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.89□□□□□ -0.19
TRA2B-204ENST00000414862 BHMG1C9JSJ3 638 aaPredicted RBP13.89□□□□□ -0.19
TRA2B-204ENST00000414862 CDAN1Q8IWY9 1227 aa13.89□□□□□ -0.19
TRA2B-204ENST00000414862 PARP9Q8IXQ6 854 aa13.89□□□□□ -0.19
TRA2B-204ENST00000414862 NBPF3Q9H094 633 aa13.89□□□□□ -0.19
TRA2B-204ENST00000414862 CLCN1P35523 988 aa13.88□□□□□ -0.19
TRA2B-204ENST00000414862 DNAJB2P25686 324 aa13.87□□□□□ -0.19
TRA2B-204ENST00000414862 REPIN1Q9BWE0 567 aaKnown RBP13.86□□□□□ -0.19
TRA2B-204ENST00000414862 KDM4CQ9H3R0 1056 aa13.86□□□□□ -0.19
TRA2B-204ENST00000414862 GPCPD1Q9NPB8 672 aa13.86□□□□□ -0.19
TRA2B-204ENST00000414862 PRG4Q92954 1404 aaPredicted RBP13.85□□□□□ -0.19
TRA2B-204ENST00000414862 HRO43593 1189 aa13.85□□□□□ -0.19
TRA2B-204ENST00000414862 FAM98CQ17RN3 349 aaKnown RBP13.85□□□□□ -0.19
TRA2B-204ENST00000414862 TMUB1Q9BVT8 246 aa13.85□□□□□ -0.19
TRA2B-204ENST00000414862 KIF13AQ9H1H9 1805 aa13.85□□□□□ -0.19
TRA2B-204ENST00000414862 GIGYF2Q6Y7W6 1299 aaKnown RBP13.84□□□□□ -0.19
TRA2B-204ENST00000414862 LAPTM4BQ86VI4 370 aa13.84□□□□□ -0.19
TRA2B-204ENST00000414862 ERICH3Q5RHP9 1530 aa13.84□□□□□ -0.19
TRA2B-204ENST00000414862 ABCC10Q5T3U5 1492 aa13.83□□□□□ -0.2
TRA2B-204ENST00000414862 FAM69CQ0P6D2 419 aa13.83□□□□□ -0.2
TRA2B-204ENST00000414862 MRPL50Q8N5N7 158 aaKnown RBP13.83□□□□□ -0.2
TRA2B-204ENST00000414862 STAC3Q96MF2 364 aa13.83□□□□□ -0.2
TRA2B-204ENST00000414862 TMEM134Q9H6X4 195 aa13.83□□□□□ -0.2
TRA2B-204ENST00000414862 DAXXQ9UER7 740 aaPredicted RBP13.82□□□□□ -0.2
TRA2B-204ENST00000414862 MAPKBP1O60336 1514 aa13.81□□□□□ -0.2
TRA2B-204ENST00000414862 HDGFP51858 240 aaKnown RBP13.78□□□□□ -0.2
TRA2B-204ENST00000414862 FAM217BQ9NTX9 383 aaPredicted RBP13.78□□□□□ -0.2
TRA2B-204ENST00000414862 DIP2BQ9P265 1576 aa13.78□□□□□ -0.2
TRA2B-204ENST00000414862 TOP2BQ02880 1626 aa13.78□□□□□ -0.2
TRA2B-204ENST00000414862 KDM6BO15054 1643 aa13.77□□□□□ -0.21
TRA2B-204ENST00000414862 SSTR3P32745 418 aaPredicted RBP13.77□□□□□ -0.21
TRA2B-204ENST00000414862 SWT1Q5T5J6 900 aaKnown RBP13.77□□□□□ -0.21
TRA2B-204ENST00000414862 ZFRQ96KR1 1074 aaKnown RBP13.77□□□□□ -0.21
TRA2B-204ENST00000414862 BIVM-ERCC5R4GMW8 1640 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms