RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 TRAF7Q6Q0C0 670 aa6.35□□□□□ -1.39
LINC01048-201ENST00000414480 TSKSQ9UJT2 592 aa6.35□□□□□ -1.39
LINC01048-201ENST00000414480 GAPVD1Q14C86 1478 aa6.34□□□□□ -1.39
LINC01048-201ENST00000414480 WIZO95785 1651 aa6.34□□□□□ -1.39
LINC01048-201ENST00000414480 NRG2O14511 850 aaPredicted RBP6.34□□□□□ -1.39
LINC01048-201ENST00000414480 LCE2BO14633 110 aa6.34□□□□□ -1.39
LINC01048-201ENST00000414480 NBR1Q14596 966 aa6.34□□□□□ -1.39
LINC01048-201ENST00000414480 TARBP1Q13395 1621 aaKnown RBP6.34□□□□□ -1.39
LINC01048-201ENST00000414480 TSR1Q2NL82 804 aaKnown RBP6.33□□□□□ -1.4
LINC01048-201ENST00000414480 TJAP1Q5JTD0 557 aa6.33□□□□□ -1.4
LINC01048-201ENST00000414480 PRKD2Q9BZL6 878 aa6.33□□□□□ -1.4
LINC01048-201ENST00000414480 IL21Q9HBE4 155 aa6.33□□□□□ -1.4
LINC01048-201ENST00000414480 PDIA6Q15084 440 aa6.32□□□□□ -1.4
LINC01048-201ENST00000414480 SAMD7Q7Z3H4 446 aa6.32□□□□□ -1.4
LINC01048-201ENST00000414480 MTRQ99707 1265 aa6.32□□□□□ -1.4
LINC01048-201ENST00000414480 V9GY48 417 aaPredicted RBP6.32□□□□□ -1.4
LINC01048-201ENST00000414480 NBPF26B4DH59 902 aa6.31□□□□□ -1.4
LINC01048-201ENST00000414480 CERKQ8TCT0 537 aa6.31□□□□□ -1.4
LINC01048-201ENST00000414480 CDCA7LQ96GN5 454 aa6.31□□□□□ -1.4
LINC01048-201ENST00000414480 SPDYE16A6NNV3 312 aaPredicted RBP6.3□□□□□ -1.4
LINC01048-201ENST00000414480 PRSS12P56730 875 aa6.3□□□□□ -1.4
LINC01048-201ENST00000414480 PPP1R18Q6NYC8 613 aa6.3□□□□□ -1.4
LINC01048-201ENST00000414480 FBXO41Q8TF61 875 aa6.3□□□□□ -1.4
LINC01048-201ENST00000414480 KIF13AQ9H1H9 1805 aa6.29□□□□□ -1.4
LINC01048-201ENST00000414480 SNAPC4Q5SXM2 1469 aa6.29□□□□□ -1.4
LINC01048-201ENST00000414480 SMAPO00193 183 aa6.29□□□□□ -1.4
LINC01048-201ENST00000414480 SYNJ1O43426 1573 aa6.29□□□□□ -1.4
LINC01048-201ENST00000414480 PODXL2Q9NZ53 605 aa6.29□□□□□ -1.4
LINC01048-201ENST00000414480 TDRD9Q8NDG6 1382 aaKnown RBP6.29□□□□□ -1.4
LINC01048-201ENST00000414480 ERCC6L2Q5T890 1561 aa6.28□□□□□ -1.4
LINC01048-201ENST00000414480 NECTIN2Q92692 538 aa6.28□□□□□ -1.4
LINC01048-201ENST00000414480 BCANQ96GW7 911 aa6.28□□□□□ -1.4
LINC01048-201ENST00000414480 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.28□□□□□ -1.4
LINC01048-201ENST00000414480 PNMA3Q9UL41 463 aa6.28□□□□□ -1.4
LINC01048-201ENST00000414480 POLA1P09884 1462 aaPredicted RBP6.28□□□□□ -1.4
LINC01048-201ENST00000414480 ABCC8Q09428 1581 aa6.27□□□□□ -1.41
LINC01048-201ENST00000414480 DNMBPQ6XZF7 1577 aa6.27□□□□□ -1.41
LINC01048-201ENST00000414480 HECW2Q9P2P5 1572 aa6.27□□□□□ -1.41
LINC01048-201ENST00000414480 HDGFP51858 240 aaKnown RBP6.27□□□□□ -1.41
LINC01048-201ENST00000414480 TPRNQ4KMQ1 711 aa6.27□□□□□ -1.41
LINC01048-201ENST00000414480 TATDN2Q93075 761 aa6.27□□□□□ -1.41
LINC01048-201ENST00000414480 FAM198AQ9UFP1 575 aa6.27□□□□□ -1.41
LINC01048-201ENST00000414480 RAD54L2Q9Y4B4 1467 aa6.27□□□□□ -1.41
LINC01048-201ENST00000414480 RNF40O75150 1001 aa6.26□□□□□ -1.41
LINC01048-201ENST00000414480 CHMP7Q8WUX9 453 aaPredicted RBP6.26□□□□□ -1.41
LINC01048-201ENST00000414480 RBM27Q9P2N5 1060 aaKnown RBP6.26□□□□□ -1.41
LINC01048-201ENST00000414480 GGCXP38435 758 aa6.25□□□□□ -1.41
LINC01048-201ENST00000414480 ILDR2Q71H61 639 aa6.25□□□□□ -1.41
LINC01048-201ENST00000414480 ZNF516Q92618 1163 aa6.25□□□□□ -1.41
LINC01048-201ENST00000414480 PDZRN3Q9UPQ7 1066 aa6.25□□□□□ -1.41
LINC01048-201ENST00000414480 SYNJ2O15056 1496 aa6.25□□□□□ -1.41
LINC01048-201ENST00000414480 MAGI1Q96QZ7 1491 aaPredicted RBP6.25□□□□□ -1.41
LINC01048-201ENST00000414480 PRDM2Q13029 1718 aa6.25□□□□□ -1.41
LINC01048-201ENST00000414480 ABCC10Q5T3U5 1492 aa6.24□□□□□ -1.41
LINC01048-201ENST00000414480 LMTK3Q96Q04 1460 aa6.24□□□□□ -1.41
LINC01048-201ENST00000414480 SOCS7O14512 581 aa6.24□□□□□ -1.41
LINC01048-201ENST00000414480 APLP1P51693 650 aa6.24□□□□□ -1.41
LINC01048-201ENST00000414480 TOP2AP11388 1531 aaKnown RBP6.24□□□□□ -1.41
LINC01048-201ENST00000414480 C3orf80F5H4A9 247 aa6.23□□□□□ -1.41
LINC01048-201ENST00000414480 ZNF787Q6DD87 383 aa6.23□□□□□ -1.41
LINC01048-201ENST00000414480 NUDT18Q6ZVK8 323 aa6.23□□□□□ -1.41
LINC01048-201ENST00000414480 ADGRL1O94910 1474 aa6.22□□□□□ -1.41
LINC01048-201ENST00000414480 GRXCR2A6NFK2 248 aa6.22□□□□□ -1.41
LINC01048-201ENST00000414480 PRIM1P49642 420 aaKnown RBP6.22□□□□□ -1.41
LINC01048-201ENST00000414480 FAM69CQ0P6D2 419 aa6.22□□□□□ -1.41
LINC01048-201ENST00000414480 SLF2Q8IX21 1173 aa6.22□□□□□ -1.41
LINC01048-201ENST00000414480 TMUB1Q9BVT8 246 aa6.22□□□□□ -1.41
LINC01048-201ENST00000414480 ARIH1Q9Y4X5 557 aaPredicted RBP6.22□□□□□ -1.41
LINC01048-201ENST00000414480 SOGA1O94964 1423 aa6.22□□□□□ -1.41
LINC01048-201ENST00000414480 SLC4A3P48751 1232 aa6.21□□□□□ -1.42
LINC01048-201ENST00000414480 E2F4Q16254 413 aa6.21□□□□□ -1.42
LINC01048-201ENST00000414480 CDHR5Q9HBB8 845 aa6.21□□□□□ -1.42
LINC01048-201ENST00000414480 GRIN2BQ13224 1484 aa6.21□□□□□ -1.42
LINC01048-201ENST00000414480 KDM6BO15054 1643 aa6.21□□□□□ -1.42
LINC01048-201ENST00000414480 COPS2P61201 443 aa6.2□□□□□ -1.42
LINC01048-201ENST00000414480 NKX2-3Q8TAU0 364 aa6.2□□□□□ -1.42
LINC01048-201ENST00000414480 BBXQ8WY36 941 aaPredicted RBP6.2□□□□□ -1.42
LINC01048-201ENST00000414480 WDR97A6NE52 1622 aa6.2□□□□□ -1.42
LINC01048-201ENST00000414480 CCDC88BA6NC98 1476 aa6.2□□□□□ -1.42
LINC01048-201ENST00000414480 CEP170Q5SW79 1584 aa6.19□□□□□ -1.42
LINC01048-201ENST00000414480 DIP2BQ9P265 1576 aa6.19□□□□□ -1.42
LINC01048-201ENST00000414480 OSBPP22059 807 aa6.19□□□□□ -1.42
LINC01048-201ENST00000414480 SWT1Q5T5J6 900 aaKnown RBP6.19□□□□□ -1.42
LINC01048-201ENST00000414480 NPM2Q86SE8 214 aaKnown RBP6.19□□□□□ -1.42
LINC01048-201ENST00000414480 PRR14Q9BWN1 585 aa6.19□□□□□ -1.42
LINC01048-201ENST00000414480 ZPR1O75312 459 aa6.18□□□□□ -1.42
LINC01048-201ENST00000414480 TTC13Q8NBP0 860 aa6.18□□□□□ -1.42
LINC01048-201ENST00000414480 GTF3C3Q9Y5Q9 886 aa6.18□□□□□ -1.42
LINC01048-201ENST00000414480 MAPKBP1O60336 1514 aa6.18□□□□□ -1.42
LINC01048-201ENST00000414480 NUP160Q12769 1436 aa6.17□□□□□ -1.42
LINC01048-201ENST00000414480 ZNF775Q96BV0 537 aaPredicted RBP6.17□□□□□ -1.42
LINC01048-201ENST00000414480 BCL11AQ9H165 835 aa6.17□□□□□ -1.42
LINC01048-201ENST00000414480 SHROOM2Q13796 1616 aa6.17□□□□□ -1.42
LINC01048-201ENST00000414480 PADI6Q6TGC4 694 aa6.16□□□□□ -1.42
LINC01048-201ENST00000414480 WDR70Q9NW82 654 aa6.16□□□□□ -1.42
LINC01048-201ENST00000414480 PCDHB3Q9Y5E6 796 aa6.16□□□□□ -1.42
LINC01048-201ENST00000414480 FGD5Q6ZNL6 1462 aa6.15□□□□□ -1.42
LINC01048-201ENST00000414480 SLC19A1P41440 591 aa6.15□□□□□ -1.42
LINC01048-201ENST00000414480 HAP1P54257 671 aaPredicted RBP6.15□□□□□ -1.42
LINC01048-201ENST00000414480 PKDCCQ504Y2 493 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms