RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 TMEM131LA2VDJ0 1609 aa15.2■□□□□ 0.02
HLA-DMB-257ENST00000414017 CCER1Q8TC90 406 aaPredicted RBP15.19■□□□□ 0.02
HLA-DMB-257ENST00000414017 SIN3AQ96ST3 1273 aa15.19■□□□□ 0.02
HLA-DMB-257ENST00000414017 TMEM2Q9UHN6 1383 aa15.19■□□□□ 0.02
HLA-DMB-257ENST00000414017 RIMS2Q9UQ26 1411 aa15.18■□□□□ 0.02
HLA-DMB-257ENST00000414017 LTKP29376 864 aa15.17■□□□□ 0.02
HLA-DMB-257ENST00000414017 HDGFP51858 240 aaKnown RBP15.16■□□□□ 0.02
HLA-DMB-257ENST00000414017 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.15■□□□□ 0.02
HLA-DMB-257ENST00000414017 KDM5AP29375 1690 aaKnown RBP15.15■□□□□ 0.02
HLA-DMB-257ENST00000414017 SCAF11Q99590 1463 aaKnown RBP15.14■□□□□ 0.01
HLA-DMB-257ENST00000414017 SLIT1O75093 1534 aa15.14■□□□□ 0.01
HLA-DMB-257ENST00000414017 ARHGAP23Q9P227 1491 aa15.14■□□□□ 0.01
HLA-DMB-257ENST00000414017 POLR1AO95602 1720 aaPredicted RBP15.13■□□□□ 0.01
HLA-DMB-257ENST00000414017 KDM2AQ9Y2K7 1162 aa15.13■□□□□ 0.01
HLA-DMB-257ENST00000414017 STRCQ7RTU9 1775 aa15.13■□□□□ 0.01
HLA-DMB-257ENST00000414017 NPHP4O75161 1426 aaPredicted RBP15.12■□□□□ 0.01
HLA-DMB-257ENST00000414017 ZFYVE9O95405 1425 aa15.12■□□□□ 0.01
HLA-DMB-257ENST00000414017 SPATA31E1Q6ZUB1 1445 aa15.12■□□□□ 0.01
HLA-DMB-257ENST00000414017 DMRT2Q9Y5R5 561 aa15.11■□□□□ 0.01
HLA-DMB-257ENST00000414017 DCAF11Q8TEB1 546 aa15.1■□□□□ 0.01
HLA-DMB-257ENST00000414017 NEXMIFQ5QGS0 1516 aa15.1■□□□□ 0.01
HLA-DMB-257ENST00000414017 RPGRIP1LQ68CZ1 1315 aa15.1■□□□□ 0.01
HLA-DMB-257ENST00000414017 NEURL4Q96JN8 1562 aa15.1■□□□□ 0.01
HLA-DMB-257ENST00000414017 VGFO15240 615 aaPredicted RBP15.09■□□□□ 0.01
HLA-DMB-257ENST00000414017 SLC26A8Q96RN1 970 aa15.09■□□□□ 0.01
HLA-DMB-257ENST00000414017 IQGAP1P46940 1657 aa15.08■□□□□ 0
HLA-DMB-257ENST00000414017 ADGRF5Q8IZF2 1346 aa15.07■□□□□ 0
HLA-DMB-257ENST00000414017 PLEKHG1Q9ULL1 1385 aa15.07■□□□□ 0
HLA-DMB-257ENST00000414017 PPLO60437 1756 aa15.06■□□□□ 0
HLA-DMB-257ENST00000414017 TONSLQ96HA7 1378 aa15.06■□□□□ 0
HLA-DMB-257ENST00000414017 MED14O60244 1454 aa15.06■□□□□ 0
HLA-DMB-257ENST00000414017 L3MBTL2Q969R5 705 aa15.04■□□□□ -0
HLA-DMB-257ENST00000414017 IFT172Q9UG01 1749 aa15.03■□□□□ -0
HLA-DMB-257ENST00000414017 ZNF335Q9H4Z2 1342 aaPredicted RBP15.02■□□□□ -0
HLA-DMB-257ENST00000414017 CLSPNQ9HAW4 1339 aa15.01□□□□□ -0.01
HLA-DMB-257ENST00000414017 MYOM2P54296 1465 aa15□□□□□ -0.01
HLA-DMB-257ENST00000414017 ADAMTS13Q76LX8 1427 aa15□□□□□ -0.01
HLA-DMB-257ENST00000414017 SETBP1Q9Y6X0 1596 aa14.98□□□□□ -0.01
HLA-DMB-257ENST00000414017 CFAP70Q5T0N1 1121 aa14.98□□□□□ -0.01
HLA-DMB-257ENST00000414017 TBX22Q9Y458 520 aa14.98□□□□□ -0.01
HLA-DMB-257ENST00000414017 NRXN3Q9Y4C0 1643 aa14.98□□□□□ -0.01
HLA-DMB-257ENST00000414017 TMEM132EQ6IEE7 984 aa14.97□□□□□ -0.01
HLA-DMB-257ENST00000414017 PIK3C2GO75747 1445 aa14.97□□□□□ -0.01
HLA-DMB-257ENST00000414017 ALKQ9UM73 1620 aa14.96□□□□□ -0.01
HLA-DMB-257ENST00000414017 DIP2AQ14689 1571 aa14.96□□□□□ -0.01
HLA-DMB-257ENST00000414017 STAC3Q96MF2 364 aa14.96□□□□□ -0.01
HLA-DMB-257ENST00000414017 STK26Q9P289 416 aa14.96□□□□□ -0.01
HLA-DMB-257ENST00000414017 METP08581 1390 aa14.96□□□□□ -0.02
HLA-DMB-257ENST00000414017 KCNA6P17658 529 aa14.94□□□□□ -0.02
HLA-DMB-257ENST00000414017 C14orf93Q9H972 538 aaKnown RBP14.94□□□□□ -0.02
HLA-DMB-257ENST00000414017 AMOTL2Q9Y2J4 779 aa14.94□□□□□ -0.02
HLA-DMB-257ENST00000414017 NRXN1Q9ULB1 1477 aa14.94□□□□□ -0.02
HLA-DMB-257ENST00000414017 PRAG1Q86YV5 1406 aa14.93□□□□□ -0.02
HLA-DMB-257ENST00000414017 RBM33Q96EV2 1170 aaKnown RBP14.93□□□□□ -0.02
HLA-DMB-257ENST00000414017 PTPRUQ92729 1446 aa14.92□□□□□ -0.02
HLA-DMB-257ENST00000414017 PROSER2Q86WR7 435 aaPredicted RBP14.92□□□□□ -0.02
HLA-DMB-257ENST00000414017 NBPF8Q3BBV2 869 aa14.91□□□□□ -0.02
HLA-DMB-257ENST00000414017 PIK3R4Q99570 1358 aa14.9□□□□□ -0.02
HLA-DMB-257ENST00000414017 SETD1AO15047 1707 aaKnown RBP14.9□□□□□ -0.02
HLA-DMB-257ENST00000414017 NBPF1Q3BBV0 1214 aa14.9□□□□□ -0.02
HLA-DMB-257ENST00000414017 C14orf37Q86TY3 774 aa14.9□□□□□ -0.02
HLA-DMB-257ENST00000414017 STRCP1A6NGW2 1772 aa14.9□□□□□ -0.02
HLA-DMB-257ENST00000414017 LAMC1P11047 1609 aa14.89□□□□□ -0.03
HLA-DMB-257ENST00000414017 CHD2O14647 1828 aaKnown RBP14.89□□□□□ -0.03
HLA-DMB-257ENST00000414017 LTBP4Q8N2S1 1624 aa14.88□□□□□ -0.03
HLA-DMB-257ENST00000414017 ASXL1Q8IXJ9 1541 aa14.88□□□□□ -0.03
HLA-DMB-257ENST00000414017 TIMELESSQ9UNS1 1208 aa14.88□□□□□ -0.03
HLA-DMB-257ENST00000414017 TRAK1Q9UPV9 953 aa14.88□□□□□ -0.03
HLA-DMB-257ENST00000414017 CPS1P31327 1500 aa14.87□□□□□ -0.03
HLA-DMB-257ENST00000414017 ROCK2O75116 1388 aaKnown RBP14.87□□□□□ -0.03
HLA-DMB-257ENST00000414017 NWD1Q149M9 1564 aa14.87□□□□□ -0.03
HLA-DMB-257ENST00000414017 YTHDC2Q9H6S0 1430 aaKnown RBP14.87□□□□□ -0.03
HLA-DMB-257ENST00000414017 LRPPRCP42704 1394 aaKnown RBP14.86□□□□□ -0.03
HLA-DMB-257ENST00000414017 SAFB2Q14151 953 aaKnown RBP eCLIP14.86□□□□□ -0.03
HLA-DMB-257ENST00000414017 CERKQ8TCT0 537 aa14.86□□□□□ -0.03
HLA-DMB-257ENST00000414017 TMEM94Q12767 1356 aa14.85□□□□□ -0.03
HLA-DMB-257ENST00000414017 NKTRP30414 1462 aaKnown RBP14.85□□□□□ -0.03
HLA-DMB-257ENST00000414017 WAPLQ7Z5K2 1190 aa14.85□□□□□ -0.03
HLA-DMB-257ENST00000414017 POGKQ9P215 609 aa14.85□□□□□ -0.03
HLA-DMB-257ENST00000414017 LRRC7Q96NW7 1537 aa14.85□□□□□ -0.03
HLA-DMB-257ENST00000414017 ROBO2Q9HCK4 1378 aa14.85□□□□□ -0.03
HLA-DMB-257ENST00000414017 XRN1Q8IZH2 1706 aaKnown RBP14.84□□□□□ -0.03
HLA-DMB-257ENST00000414017 CARD11Q9BXL7 1154 aa14.84□□□□□ -0.03
HLA-DMB-257ENST00000414017 ADGRB1O14514 1584 aa14.84□□□□□ -0.03
HLA-DMB-257ENST00000414017 TRPM1Q7Z4N2 1603 aa14.84□□□□□ -0.03
HLA-DMB-257ENST00000414017 PRAM1Q96QH2 718 aa14.83□□□□□ -0.04
HLA-DMB-257ENST00000414017 KIAA1210Q9ULL0 1709 aa14.83□□□□□ -0.04
HLA-DMB-257ENST00000414017 ABCC11Q96J66 1382 aa14.82□□□□□ -0.04
HLA-DMB-257ENST00000414017 PLEKHH1Q9ULM0 1364 aa14.82□□□□□ -0.04
HLA-DMB-257ENST00000414017 PTCH1Q13635 1447 aa14.81□□□□□ -0.04
HLA-DMB-257ENST00000414017 RALGAPBQ86X10 1494 aa14.81□□□□□ -0.04
HLA-DMB-257ENST00000414017 MSH6P52701 1360 aa14.79□□□□□ -0.04
HLA-DMB-257ENST00000414017 KNDC1Q76NI1 1749 aa14.79□□□□□ -0.04
HLA-DMB-257ENST00000414017 SCAF1Q9H7N4 1312 aaKnown RBP14.79□□□□□ -0.04
HLA-DMB-257ENST00000414017 TECPR2O15040 1411 aa14.78□□□□□ -0.04
HLA-DMB-257ENST00000414017 MINK1Q8N4C8 1332 aaPredicted RBP14.78□□□□□ -0.04
HLA-DMB-257ENST00000414017 UBAP1LF5GYI3 381 aa14.78□□□□□ -0.04
HLA-DMB-257ENST00000414017 HIRIP3Q9BW71 556 aaPredicted RBP14.78□□□□□ -0.04
HLA-DMB-257ENST00000414017 ATF3P18847 181 aa14.77□□□□□ -0.05
HLA-DMB-257ENST00000414017 XIRP1Q702N8 1843 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms