RNA–Protein interactions for RNA: ENST00000413437.1

CSTF2-202, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 5

Gene CSTF2, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-202ENST00000413437 DMRT2Q9Y5R5 561 aa11.4□□□□□ -0.58
CSTF2-202ENST00000413437 ANKRD30BQ9BXX2 1392 aa11.4□□□□□ -0.59
CSTF2-202ENST00000413437 ZNF326Q5BKZ1 582 aaKnown RBP11.39□□□□□ -0.59
CSTF2-202ENST00000413437 SLC26A8Q96RN1 970 aa11.39□□□□□ -0.59
CSTF2-202ENST00000413437 EID1Q9Y6B2 187 aa11.39□□□□□ -0.59
CSTF2-202ENST00000413437 KIF1BO60333 1816 aa11.38□□□□□ -0.59
CSTF2-202ENST00000413437 RGL3Q3MIN7 710 aa11.38□□□□□ -0.59
CSTF2-202ENST00000413437 IQGAP1P46940 1657 aa11.38□□□□□ -0.59
CSTF2-202ENST00000413437 ACIN1Q9UKV3 1341 aaKnown RBP11.37□□□□□ -0.59
CSTF2-202ENST00000413437 CCDC144AA2RUR9 1427 aa11.37□□□□□ -0.59
CSTF2-202ENST00000413437 LTBP4Q8N2S1 1624 aa11.37□□□□□ -0.59
CSTF2-202ENST00000413437 SPATA31E1Q6ZUB1 1445 aa11.36□□□□□ -0.59
CSTF2-202ENST00000413437 NEXMIFQ5QGS0 1516 aa11.36□□□□□ -0.59
CSTF2-202ENST00000413437 PPP1R15AO75807 674 aaPredicted RBP11.36□□□□□ -0.59
CSTF2-202ENST00000413437 BCANQ96GW7 911 aa11.36□□□□□ -0.59
CSTF2-202ENST00000413437 STRCP1A6NGW2 1772 aa11.36□□□□□ -0.59
CSTF2-202ENST00000413437 DHX57Q6P158 1386 aaKnown RBP11.35□□□□□ -0.59
CSTF2-202ENST00000413437 PLEKHG1Q9ULL1 1385 aa11.34□□□□□ -0.59
CSTF2-202ENST00000413437 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.34□□□□□ -0.59
CSTF2-202ENST00000413437 SIN3AQ96ST3 1273 aa11.34□□□□□ -0.59
CSTF2-202ENST00000413437 ADAMTS13Q76LX8 1427 aa11.34□□□□□ -0.59
CSTF2-202ENST00000413437 CERKQ8TCT0 537 aa11.33□□□□□ -0.6
CSTF2-202ENST00000413437 NRXN3Q9Y4C0 1643 aa11.33□□□□□ -0.6
CSTF2-202ENST00000413437 ADGRF5Q8IZF2 1346 aa11.33□□□□□ -0.6
CSTF2-202ENST00000413437 PPLO60437 1756 aa11.32□□□□□ -0.6
CSTF2-202ENST00000413437 HDGFP51858 240 aaKnown RBP11.31□□□□□ -0.6
CSTF2-202ENST00000413437 RBM33Q96EV2 1170 aaKnown RBP11.31□□□□□ -0.6
CSTF2-202ENST00000413437 IFT172Q9UG01 1749 aa11.3□□□□□ -0.6
CSTF2-202ENST00000413437 RPGRIP1LQ68CZ1 1315 aa11.3□□□□□ -0.6
CSTF2-202ENST00000413437 PTPRUQ92729 1446 aa11.29□□□□□ -0.6
CSTF2-202ENST00000413437 NEUROD1Q13562 356 aa11.29□□□□□ -0.6
CSTF2-202ENST00000413437 KDM2AQ9Y2K7 1162 aa11.29□□□□□ -0.6
CSTF2-202ENST00000413437 TBX22Q9Y458 520 aa11.29□□□□□ -0.6
CSTF2-202ENST00000413437 METP08581 1390 aa11.28□□□□□ -0.6
CSTF2-202ENST00000413437 VGFO15240 615 aaPredicted RBP11.28□□□□□ -0.6
CSTF2-202ENST00000413437 SETBP1Q9Y6X0 1596 aa11.28□□□□□ -0.6
CSTF2-202ENST00000413437 LRRC7Q96NW7 1537 aa11.27□□□□□ -0.61
CSTF2-202ENST00000413437 KCNA6P17658 529 aa11.27□□□□□ -0.61
CSTF2-202ENST00000413437 DCAF11Q8TEB1 546 aa11.27□□□□□ -0.61
CSTF2-202ENST00000413437 CHD2O14647 1828 aaKnown RBP11.26□□□□□ -0.61
CSTF2-202ENST00000413437 ALKQ9UM73 1620 aa11.26□□□□□ -0.61
CSTF2-202ENST00000413437 SETD1AO15047 1707 aaKnown RBP11.26□□□□□ -0.61
CSTF2-202ENST00000413437 XIRP1Q702N8 1843 aaKnown RBP11.25□□□□□ -0.61
CSTF2-202ENST00000413437 TMEM132EQ6IEE7 984 aa11.25□□□□□ -0.61
CSTF2-202ENST00000413437 AMOTL2Q9Y2J4 779 aa11.25□□□□□ -0.61
CSTF2-202ENST00000413437 CPS1P31327 1500 aa11.25□□□□□ -0.61
CSTF2-202ENST00000413437 NWD1Q149M9 1564 aa11.24□□□□□ -0.61
CSTF2-202ENST00000413437 CFAP70Q5T0N1 1121 aa11.24□□□□□ -0.61
CSTF2-202ENST00000413437 PROSER2Q86WR7 435 aaPredicted RBP11.24□□□□□ -0.61
CSTF2-202ENST00000413437 DIP2AQ14689 1571 aa11.24□□□□□ -0.61
CSTF2-202ENST00000413437 ILDR1Q86SU0 546 aaPredicted RBP11.23□□□□□ -0.61
CSTF2-202ENST00000413437 L3MBTL2Q969R5 705 aa11.23□□□□□ -0.61
CSTF2-202ENST00000413437 PIK3C2GO75747 1445 aa11.23□□□□□ -0.61
CSTF2-202ENST00000413437 NRXN1Q9ULB1 1477 aa11.23□□□□□ -0.61
CSTF2-202ENST00000413437 ASXL1Q8IXJ9 1541 aa11.23□□□□□ -0.61
CSTF2-202ENST00000413437 MYOM2P54296 1465 aa11.22□□□□□ -0.61
CSTF2-202ENST00000413437 TMEM94Q12767 1356 aa11.22□□□□□ -0.61
CSTF2-202ENST00000413437 XRN1Q8IZH2 1706 aaKnown RBP11.21□□□□□ -0.61
CSTF2-202ENST00000413437 C14orf93Q9H972 538 aaKnown RBP11.21□□□□□ -0.61
CSTF2-202ENST00000413437 STK26Q9P289 416 aa11.21□□□□□ -0.61
CSTF2-202ENST00000413437 PIK3R4Q99570 1358 aa11.2□□□□□ -0.62
CSTF2-202ENST00000413437 FBXO41Q8TF61 875 aa11.2□□□□□ -0.62
CSTF2-202ENST00000413437 ROBO2Q9HCK4 1378 aa11.19□□□□□ -0.62
CSTF2-202ENST00000413437 UBAP1LF5GYI3 381 aa11.19□□□□□ -0.62
CSTF2-202ENST00000413437 NKTRP30414 1462 aaKnown RBP11.19□□□□□ -0.62
CSTF2-202ENST00000413437 NBPF1Q3BBV0 1214 aa11.18□□□□□ -0.62
CSTF2-202ENST00000413437 WAPLQ7Z5K2 1190 aa11.18□□□□□ -0.62
CSTF2-202ENST00000413437 IQSEC2Q5JU85 1478 aa11.18□□□□□ -0.62
CSTF2-202ENST00000413437 PLEKHH1Q9ULM0 1364 aa11.17□□□□□ -0.62
CSTF2-202ENST00000413437 PIP4K2BP78356 416 aa11.17□□□□□ -0.62
CSTF2-202ENST00000413437 NBPF8Q3BBV2 869 aa11.17□□□□□ -0.62
CSTF2-202ENST00000413437 LRPPRCP42704 1394 aaKnown RBP11.16□□□□□ -0.62
CSTF2-202ENST00000413437 PRAG1Q86YV5 1406 aa11.16□□□□□ -0.62
CSTF2-202ENST00000413437 YTHDC2Q9H6S0 1430 aaKnown RBP11.16□□□□□ -0.62
CSTF2-202ENST00000413437 ADGRB1O14514 1584 aa11.16□□□□□ -0.62
CSTF2-202ENST00000413437 SCAF1Q9H7N4 1312 aaKnown RBP11.14□□□□□ -0.63
CSTF2-202ENST00000413437 C14orf37Q86TY3 774 aa11.14□□□□□ -0.63
CSTF2-202ENST00000413437 CCER1Q8TC90 406 aaPredicted RBP11.14□□□□□ -0.63
CSTF2-202ENST00000413437 TRAK1Q9UPV9 953 aa11.14□□□□□ -0.63
CSTF2-202ENST00000413437 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.14□□□□□ -0.63
CSTF2-202ENST00000413437 ABCC11Q96J66 1382 aa11.14□□□□□ -0.63
CSTF2-202ENST00000413437 SAFB2Q14151 953 aaKnown RBP eCLIP11.13□□□□□ -0.63
CSTF2-202ENST00000413437 TONSLQ96HA7 1378 aa11.13□□□□□ -0.63
CSTF2-202ENST00000413437 LAMC1P11047 1609 aa11.13□□□□□ -0.63
CSTF2-202ENST00000413437 NALCNQ8IZF0 1738 aa11.12□□□□□ -0.63
CSTF2-202ENST00000413437 PTCH1Q13635 1447 aa11.12□□□□□ -0.63
CSTF2-202ENST00000413437 TOM1O60784 492 aa11.12□□□□□ -0.63
CSTF2-202ENST00000413437 STAC3Q96MF2 364 aa11.12□□□□□ -0.63
CSTF2-202ENST00000413437 MSH6P52701 1360 aa11.12□□□□□ -0.63
CSTF2-202ENST00000413437 TECPR2O15040 1411 aa11.11□□□□□ -0.63
CSTF2-202ENST00000413437 PRAM1Q96QH2 718 aa11.11□□□□□ -0.63
CSTF2-202ENST00000413437 C19orf44Q9H6X5 657 aa11.11□□□□□ -0.63
CSTF2-202ENST00000413437 KNDC1Q76NI1 1749 aa11.11□□□□□ -0.63
CSTF2-202ENST00000413437 ADGRL3Q9HAR2 1447 aa11.1□□□□□ -0.63
CSTF2-202ENST00000413437 SLAIN2Q9P270 581 aa11.1□□□□□ -0.63
CSTF2-202ENST00000413437 NCOA3Q9Y6Q9 1424 aa11.09□□□□□ -0.63
CSTF2-202ENST00000413437 TRPM1Q7Z4N2 1603 aa11.09□□□□□ -0.63
CSTF2-202ENST00000413437 NUTM2FA1L443 756 aa11.09□□□□□ -0.63
CSTF2-202ENST00000413437 HSPA1LP34931 641 aa11.09□□□□□ -0.63
CSTF2-202ENST00000413437 KIAA1210Q9ULL0 1709 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms