RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 CCDC144AA2RUR9 1427 aa35.16■■■■□ 3.22
UBE2E3-202ENST00000410062 ZNF326Q5BKZ1 582 aaKnown RBP35.14■■■■□ 3.22
UBE2E3-202ENST00000410062 NUTM2DQ5VT03 806 aaPredicted RBP35.13■■■■□ 3.21
UBE2E3-202ENST00000410062 HDGFP51858 240 aaKnown RBP35.11■■■■□ 3.21
UBE2E3-202ENST00000410062 PPP1R15AO75807 674 aaPredicted RBP35.1■■■■□ 3.21
UBE2E3-202ENST00000410062 SENP3Q9H4L4 574 aaPredicted RBP35.1■■■■□ 3.21
UBE2E3-202ENST00000410062 ZNF335Q9H4Z2 1342 aaPredicted RBP35.09■■■■□ 3.21
UBE2E3-202ENST00000410062 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.08■■■■□ 3.21
UBE2E3-202ENST00000410062 ANKRD30BQ9BXX2 1392 aa35.06■■■■□ 3.2
UBE2E3-202ENST00000410062 BCANQ96GW7 911 aa35.04■■■■□ 3.2
UBE2E3-202ENST00000410062 PLEKHG1Q9ULL1 1385 aa35.03■■■■□ 3.2
UBE2E3-202ENST00000410062 NEXMIFQ5QGS0 1516 aa35.02■■■■□ 3.2
UBE2E3-202ENST00000410062 LTBP4Q8N2S1 1624 aa35.01■■■■□ 3.2
UBE2E3-202ENST00000410062 SLC26A8Q96RN1 970 aa35■■■■□ 3.19
UBE2E3-202ENST00000410062 SPATA31E1Q6ZUB1 1445 aa34.99■■■■□ 3.19
UBE2E3-202ENST00000410062 RGL3Q3MIN7 710 aa34.99■■■■□ 3.19
UBE2E3-202ENST00000410062 PCGF6Q9BYE7 350 aa34.95■■■■□ 3.18
UBE2E3-202ENST00000410062 RPGRIP1LQ68CZ1 1315 aa34.94■■■■□ 3.18
UBE2E3-202ENST00000410062 CERKQ8TCT0 537 aa34.92■■■■□ 3.18
UBE2E3-202ENST00000410062 PPLO60437 1756 aa34.91■■■■□ 3.18
UBE2E3-202ENST00000410062 ADAMTS13Q76LX8 1427 aa34.89■■■■□ 3.18
UBE2E3-202ENST00000410062 STRCP1A6NGW2 1772 aa34.89■■■■□ 3.18
UBE2E3-202ENST00000410062 VGFO15240 615 aaPredicted RBP34.87■■■■□ 3.17
UBE2E3-202ENST00000410062 DHX57Q6P158 1386 aaKnown RBP34.87■■■■□ 3.17
UBE2E3-202ENST00000410062 NRXN3Q9Y4C0 1643 aa34.86■■■■□ 3.17
UBE2E3-202ENST00000410062 TBX22Q9Y458 520 aa34.85■■■■□ 3.17
UBE2E3-202ENST00000410062 SETBP1Q9Y6X0 1596 aa34.84■■■■□ 3.17
UBE2E3-202ENST00000410062 CPS1P31327 1500 aa34.84■■■■□ 3.17
UBE2E3-202ENST00000410062 IFT172Q9UG01 1749 aa34.84■■■■□ 3.17
UBE2E3-202ENST00000410062 DIP2AQ14689 1571 aa34.82■■■■□ 3.16
UBE2E3-202ENST00000410062 ADGRF5Q8IZF2 1346 aa34.79■■■■□ 3.16
UBE2E3-202ENST00000410062 KCNA6P17658 529 aa34.79■■■■□ 3.16
UBE2E3-202ENST00000410062 CHD2O14647 1828 aaKnown RBP34.75■■■■□ 3.15
UBE2E3-202ENST00000410062 NWD1Q149M9 1564 aa34.73■■■■□ 3.15
UBE2E3-202ENST00000410062 LRRC7Q96NW7 1537 aa34.72■■■■□ 3.15
UBE2E3-202ENST00000410062 METP08581 1390 aa34.71■■■■□ 3.15
UBE2E3-202ENST00000410062 SIN3AQ96ST3 1273 aa34.7■■■■□ 3.15
UBE2E3-202ENST00000410062 PIK3R4Q99570 1358 aa34.7■■■■□ 3.15
UBE2E3-202ENST00000410062 IQSEC2Q5JU85 1478 aa34.7■■■■□ 3.15
UBE2E3-202ENST00000410062 ALKQ9UM73 1620 aa34.7■■■■□ 3.15
UBE2E3-202ENST00000410062 PTPRUQ92729 1446 aa34.68■■■■□ 3.14
UBE2E3-202ENST00000410062 SETD1AO15047 1707 aaKnown RBP34.67■■■■□ 3.14
UBE2E3-202ENST00000410062 MYOM2P54296 1465 aa34.67■■■■□ 3.14
UBE2E3-202ENST00000410062 DCAF11Q8TEB1 546 aa34.67■■■■□ 3.14
UBE2E3-202ENST00000410062 PIK3C2GO75747 1445 aa34.66■■■■□ 3.14
UBE2E3-202ENST00000410062 KDM2AQ9Y2K7 1162 aa34.66■■■■□ 3.14
UBE2E3-202ENST00000410062 NKTRP30414 1462 aaKnown RBP34.65■■■■□ 3.14
UBE2E3-202ENST00000410062 AMOTL2Q9Y2J4 779 aa34.65■■■■□ 3.14
UBE2E3-202ENST00000410062 NEUROD1Q13562 356 aa34.64■■■■□ 3.14
UBE2E3-202ENST00000410062 PROSER2Q86WR7 435 aaPredicted RBP34.64■■■■□ 3.14
UBE2E3-202ENST00000410062 RBM33Q96EV2 1170 aaKnown RBP34.64■■■■□ 3.14
UBE2E3-202ENST00000410062 NRXN1Q9ULB1 1477 aa34.63■■■■□ 3.13
UBE2E3-202ENST00000410062 FBXO41Q8TF61 875 aa34.62■■■■□ 3.13
UBE2E3-202ENST00000410062 XIRP1Q702N8 1843 aaKnown RBP34.61■■■■□ 3.13
UBE2E3-202ENST00000410062 TMEM94Q12767 1356 aa34.6■■■■□ 3.13
UBE2E3-202ENST00000410062 XRN1Q8IZH2 1706 aaKnown RBP34.58■■■■□ 3.13
UBE2E3-202ENST00000410062 ILDR1Q86SU0 546 aaPredicted RBP34.54■■■■□ 3.12
UBE2E3-202ENST00000410062 UBAP1LF5GYI3 381 aa34.53■■■■□ 3.12
UBE2E3-202ENST00000410062 CFAP70Q5T0N1 1121 aa34.53■■■■□ 3.12
UBE2E3-202ENST00000410062 STAC3Q96MF2 364 aa34.53■■■■□ 3.12
UBE2E3-202ENST00000410062 C14orf93Q9H972 538 aaKnown RBP34.53■■■■□ 3.12
UBE2E3-202ENST00000410062 TMEM132EQ6IEE7 984 aa34.52■■■■□ 3.12
UBE2E3-202ENST00000410062 ASXL1Q8IXJ9 1541 aa34.5■■■■□ 3.11
UBE2E3-202ENST00000410062 L3MBTL2Q969R5 705 aa34.49■■■■□ 3.11
UBE2E3-202ENST00000410062 LAMC1P11047 1609 aa34.49■■■■□ 3.11
UBE2E3-202ENST00000410062 STK26Q9P289 416 aa34.45■■■■□ 3.11
UBE2E3-202ENST00000410062 TOM1O60784 492 aa34.45■■■■□ 3.1
UBE2E3-202ENST00000410062 C14orf37Q86TY3 774 aa34.44■■■■□ 3.1
UBE2E3-202ENST00000410062 ROBO2Q9HCK4 1378 aa34.42■■■■□ 3.1
UBE2E3-202ENST00000410062 PTCH1Q13635 1447 aa34.42■■■■□ 3.1
UBE2E3-202ENST00000410062 LRPPRCP42704 1394 aaKnown RBP34.42■■■■□ 3.1
UBE2E3-202ENST00000410062 NCOA3Q9Y6Q9 1424 aa34.41■■■■□ 3.1
UBE2E3-202ENST00000410062 MSH6P52701 1360 aa34.41■■■■□ 3.1
UBE2E3-202ENST00000410062 YTHDC2Q9H6S0 1430 aaKnown RBP34.4■■■■□ 3.1
UBE2E3-202ENST00000410062 PRAG1Q86YV5 1406 aa34.4■■■■□ 3.1
UBE2E3-202ENST00000410062 PIP4K2BP78356 416 aa34.38■■■■□ 3.09
UBE2E3-202ENST00000410062 ADGRB1O14514 1584 aa34.37■■■■□ 3.09
UBE2E3-202ENST00000410062 SCAF1Q9H7N4 1312 aaKnown RBP34.36■■■■□ 3.09
UBE2E3-202ENST00000410062 ABCC11Q96J66 1382 aa34.36■■■■□ 3.09
UBE2E3-202ENST00000410062 TONSLQ96HA7 1378 aa34.35■■■■□ 3.09
UBE2E3-202ENST00000410062 TECPR2O15040 1411 aa34.35■■■■□ 3.09
UBE2E3-202ENST00000410062 KNDC1Q76NI1 1749 aa34.34■■■■□ 3.09
UBE2E3-202ENST00000410062 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.33■■■■□ 3.09
UBE2E3-202ENST00000410062 C19orf44Q9H6X5 657 aa34.33■■■■□ 3.09
UBE2E3-202ENST00000410062 WAPLQ7Z5K2 1190 aa34.31■■■■□ 3.08
UBE2E3-202ENST00000410062 NALCNQ8IZF0 1738 aa34.3■■■■□ 3.08
UBE2E3-202ENST00000410062 CCER1Q8TC90 406 aaPredicted RBP34.3■■■■□ 3.08
UBE2E3-202ENST00000410062 KIAA1210Q9ULL0 1709 aa34.29■■■■□ 3.08
UBE2E3-202ENST00000410062 ADGRL3Q9HAR2 1447 aa34.29■■■■□ 3.08
UBE2E3-202ENST00000410062 CLSPNQ9HAW4 1339 aa34.27■■■■□ 3.08
UBE2E3-202ENST00000410062 ATF3P18847 181 aa34.27■■■■□ 3.08
UBE2E3-202ENST00000410062 PLEKHH1Q9ULM0 1364 aa34.27■■■■□ 3.08
UBE2E3-202ENST00000410062 NBPF1Q3BBV0 1214 aa34.26■■■■□ 3.07
UBE2E3-202ENST00000410062 TRAK1Q9UPV9 953 aa34.26■■■■□ 3.07
UBE2E3-202ENST00000410062 CADPS2Q86UW7 1296 aa34.24■■■■□ 3.07
UBE2E3-202ENST00000410062 SIRT1Q96EB6 747 aa34.23■■■■□ 3.07
UBE2E3-202ENST00000410062 SLAIN2Q9P270 581 aa34.23■■■■□ 3.07
UBE2E3-202ENST00000410062 FAM135BQ49AJ0 1406 aa34.22■■■■□ 3.07
UBE2E3-202ENST00000410062 DCCP43146 1447 aa34.22■■■■□ 3.07
UBE2E3-202ENST00000410062 DLC1Q96QB1 1528 aa34.21■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms