RNA–Protein interactions for RNA: ENST00000409368.5

SUMO1-206, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 4 BASIC

Gene SUMO1, Length 1,187 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-206ENST00000409368 STAG3Q9UJ98 1225 aa19.52■□□□□ 0.72
SUMO1-206ENST00000409368 TRPM2O94759 1503 aa19.51■□□□□ 0.71
SUMO1-206ENST00000409368 ACIN1Q9UKV3 1341 aaKnown RBP19.48■□□□□ 0.71
SUMO1-206ENST00000409368 PLEKHG1Q9ULL1 1385 aa19.47■□□□□ 0.71
SUMO1-206ENST00000409368 RIMS2Q9UQ26 1411 aa19.47■□□□□ 0.71
SUMO1-206ENST00000409368 LRRC7Q96NW7 1537 aa19.46■□□□□ 0.71
SUMO1-206ENST00000409368 CLTCL1P53675 1640 aa19.45■□□□□ 0.7
SUMO1-206ENST00000409368 HDGFP51858 240 aaKnown RBP19.45■□□□□ 0.7
SUMO1-206ENST00000409368 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.44■□□□□ 0.7
SUMO1-206ENST00000409368 NWD1Q149M9 1564 aa19.44■□□□□ 0.7
SUMO1-206ENST00000409368 XIRP1Q702N8 1843 aaKnown RBP19.41■□□□□ 0.7
SUMO1-206ENST00000409368 DIP2AQ14689 1571 aa19.41■□□□□ 0.7
SUMO1-206ENST00000409368 KIF1BO60333 1816 aa19.41■□□□□ 0.7
SUMO1-206ENST00000409368 ALKQ9UM73 1620 aa19.4■□□□□ 0.7
SUMO1-206ENST00000409368 CHD2O14647 1828 aaKnown RBP19.4■□□□□ 0.7
SUMO1-206ENST00000409368 SETD5Q9C0A6 1442 aa19.4■□□□□ 0.7
SUMO1-206ENST00000409368 NKTRP30414 1462 aaKnown RBP19.39■□□□□ 0.69
SUMO1-206ENST00000409368 KCNA6P17658 529 aa19.38■□□□□ 0.69
SUMO1-206ENST00000409368 ADAMTS13Q76LX8 1427 aa19.38■□□□□ 0.69
SUMO1-206ENST00000409368 TRIM52Q96A61 297 aa19.38■□□□□ 0.69
SUMO1-206ENST00000409368 SLC4A1APQ9BWU0 796 aaKnown RBP19.38■□□□□ 0.69
SUMO1-206ENST00000409368 TBX22Q9Y458 520 aa19.38■□□□□ 0.69
SUMO1-206ENST00000409368 SETBP1Q9Y6X0 1596 aa19.36■□□□□ 0.69
SUMO1-206ENST00000409368 NEXMIFQ5QGS0 1516 aa19.36■□□□□ 0.69
SUMO1-206ENST00000409368 PIK3R4Q99570 1358 aa19.36■□□□□ 0.69
SUMO1-206ENST00000409368 NRXN3Q9Y4C0 1643 aa19.36■□□□□ 0.69
SUMO1-206ENST00000409368 UBAP1LF5GYI3 381 aa19.35■□□□□ 0.69
SUMO1-206ENST00000409368 SLC26A8Q96RN1 970 aa19.35■□□□□ 0.69
SUMO1-206ENST00000409368 CHGAP10645 457 aaKnown RBP19.34■□□□□ 0.69
SUMO1-206ENST00000409368 TOM1O60784 492 aa19.33■□□□□ 0.68
SUMO1-206ENST00000409368 HRCP23327 699 aa19.33■□□□□ 0.68
SUMO1-206ENST00000409368 PPP1R15AO75807 674 aaPredicted RBP19.32■□□□□ 0.68
SUMO1-206ENST00000409368 MPHOSPH9Q99550 1183 aa19.32■□□□□ 0.68
SUMO1-206ENST00000409368 RAB3GAP2Q9H2M9 1393 aa19.31■□□□□ 0.68
SUMO1-206ENST00000409368 NCOA3Q9Y6Q9 1424 aa19.3■□□□□ 0.68
SUMO1-206ENST00000409368 RPGRIP1LQ68CZ1 1315 aa19.29■□□□□ 0.68
SUMO1-206ENST00000409368 TMEM94Q12767 1356 aa19.29■□□□□ 0.68
SUMO1-206ENST00000409368 PPLO60437 1756 aa19.29■□□□□ 0.68
SUMO1-206ENST00000409368 SPATA31E1Q6ZUB1 1445 aa19.27■□□□□ 0.68
SUMO1-206ENST00000409368 XRN1Q8IZH2 1706 aaKnown RBP19.27■□□□□ 0.68
SUMO1-206ENST00000409368 CCDC144AA2RUR9 1427 aa19.25■□□□□ 0.67
SUMO1-206ENST00000409368 SETD1AO15047 1707 aaKnown RBP19.25■□□□□ 0.67
SUMO1-206ENST00000409368 NUTM2DQ5VT03 806 aaPredicted RBP19.25■□□□□ 0.67
SUMO1-206ENST00000409368 ZNF326Q5BKZ1 582 aaKnown RBP19.24■□□□□ 0.67
SUMO1-206ENST00000409368 BCANQ96GW7 911 aa19.24■□□□□ 0.67
SUMO1-206ENST00000409368 IFT172Q9UG01 1749 aa19.24■□□□□ 0.67
SUMO1-206ENST00000409368 PTPRUQ92729 1446 aa19.24■□□□□ 0.67
SUMO1-206ENST00000409368 PROSER2Q86WR7 435 aaPredicted RBP19.23■□□□□ 0.67
SUMO1-206ENST00000409368 PRAG1Q86YV5 1406 aa19.23■□□□□ 0.67
SUMO1-206ENST00000409368 VGFO15240 615 aaPredicted RBP19.22■□□□□ 0.67
SUMO1-206ENST00000409368 FAM135BQ49AJ0 1406 aa19.2■□□□□ 0.66
SUMO1-206ENST00000409368 METP08581 1390 aa19.19■□□□□ 0.66
SUMO1-206ENST00000409368 ANKRD30BQ9BXX2 1392 aa19.18■□□□□ 0.66
SUMO1-206ENST00000409368 AMOTL2Q9Y2J4 779 aa19.17■□□□□ 0.66
SUMO1-206ENST00000409368 DISP3Q9P2K9 1392 aa19.17■□□□□ 0.66
SUMO1-206ENST00000409368 PIP4K2BP78356 416 aa19.16■□□□□ 0.66
SUMO1-206ENST00000409368 MSH6P52701 1360 aa19.16■□□□□ 0.66
SUMO1-206ENST00000409368 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.15■□□□□ 0.66
SUMO1-206ENST00000409368 HSPA1LP34931 641 aa19.15■□□□□ 0.66
SUMO1-206ENST00000409368 DCCP43146 1447 aa19.15■□□□□ 0.66
SUMO1-206ENST00000409368 ILDR2Q71H61 639 aa19.14■□□□□ 0.65
SUMO1-206ENST00000409368 PTCH1Q13635 1447 aa19.14■□□□□ 0.65
SUMO1-206ENST00000409368 NRXN1Q9ULB1 1477 aa19.13■□□□□ 0.65
SUMO1-206ENST00000409368 ROBO1Q9Y6N7 1651 aa19.12■□□□□ 0.65
SUMO1-206ENST00000409368 C19orf44Q9H6X5 657 aa19.12■□□□□ 0.65
SUMO1-206ENST00000409368 MYOM2P54296 1465 aa19.11■□□□□ 0.65
SUMO1-206ENST00000409368 PIK3C2GO75747 1445 aa19.11■□□□□ 0.65
SUMO1-206ENST00000409368 RBM33Q96EV2 1170 aaKnown RBP19.11■□□□□ 0.65
SUMO1-206ENST00000409368 SCAF1Q9H7N4 1312 aaKnown RBP19.1■□□□□ 0.65
SUMO1-206ENST00000409368 ADGRF5Q8IZF2 1346 aa19.09■□□□□ 0.65
SUMO1-206ENST00000409368 SLAIN2Q9P270 581 aa19.08■□□□□ 0.64
SUMO1-206ENST00000409368 TECPR2O15040 1411 aa19.08■□□□□ 0.64
SUMO1-206ENST00000409368 ADGRL3Q9HAR2 1447 aa19.08■□□□□ 0.64
SUMO1-206ENST00000409368 CADPS2Q86UW7 1296 aa19.07■□□□□ 0.64
SUMO1-206ENST00000409368 LAMC1P11047 1609 aa19.07■□□□□ 0.64
SUMO1-206ENST00000409368 NALCNQ8IZF0 1738 aa19.06■□□□□ 0.64
SUMO1-206ENST00000409368 RGL3Q3MIN7 710 aa19.06■□□□□ 0.64
SUMO1-206ENST00000409368 KNDC1Q76NI1 1749 aa19.05■□□□□ 0.64
SUMO1-206ENST00000409368 ASXL1Q8IXJ9 1541 aa19.05■□□□□ 0.64
SUMO1-206ENST00000409368 ROBO2Q9HCK4 1378 aa19.04■□□□□ 0.64
SUMO1-206ENST00000409368 STAC3Q96MF2 364 aa19.03■□□□□ 0.64
SUMO1-206ENST00000409368 AHDC1Q5TGY3 1603 aaPredicted RBP19.02■□□□□ 0.64
SUMO1-206ENST00000409368 LRPPRCP42704 1394 aaKnown RBP19.02■□□□□ 0.64
SUMO1-206ENST00000409368 ABCC11Q96J66 1382 aa19.02■□□□□ 0.64
SUMO1-206ENST00000409368 MST1RQ04912 1400 aa19.01■□□□□ 0.63
SUMO1-206ENST00000409368 SOCS7O14512 581 aa19.01■□□□□ 0.63
SUMO1-206ENST00000409368 ATF3P18847 181 aa19.01■□□□□ 0.63
SUMO1-206ENST00000409368 C14orf93Q9H972 538 aaKnown RBP19.01■□□□□ 0.63
SUMO1-206ENST00000409368 MED1Q15648 1581 aaPredicted RBP19.01■□□□□ 0.63
SUMO1-206ENST00000409368 C14orf37Q86TY3 774 aa19■□□□□ 0.63
SUMO1-206ENST00000409368 PHLPP1O60346 1717 aa18.99■□□□□ 0.63
SUMO1-206ENST00000409368 COL16A1Q07092 1604 aaPredicted RBP18.99■□□□□ 0.63
SUMO1-206ENST00000409368 SIRT1Q96EB6 747 aa18.98■□□□□ 0.63
SUMO1-206ENST00000409368 YTHDC2Q9H6S0 1430 aaKnown RBP18.97■□□□□ 0.63
SUMO1-206ENST00000409368 CDC42BPGQ6DT37 1551 aa18.97■□□□□ 0.63
SUMO1-206ENST00000409368 DHX57Q6P158 1386 aaKnown RBP18.96■□□□□ 0.63
SUMO1-206ENST00000409368 ADGRB1O14514 1584 aa18.96■□□□□ 0.63
SUMO1-206ENST00000409368 NHSL1Q5SYE7 1610 aa18.96■□□□□ 0.63
SUMO1-206ENST00000409368 BRINP3Q76B58 766 aa18.94■□□□□ 0.62
SUMO1-206ENST00000409368 DLC1Q96QB1 1528 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms