RNA–Protein interactions for RNA: ENST00000404436.2

CHI3L1-202, Transcript of chitinase 3 like 1, humanhuman

TSL 2

Gene CHI3L1, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHI3L1-202ENST00000404436 PPP1R15AO75807 674 aaPredicted RBP24.4■■□□□ 1.5
CHI3L1-202ENST00000404436 ZFYVE9O95405 1425 aa24.4■■□□□ 1.5
CHI3L1-202ENST00000404436 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.38■■□□□ 1.49
CHI3L1-202ENST00000404436 SENP3Q9H4L4 574 aaPredicted RBP24.38■■□□□ 1.49
CHI3L1-202ENST00000404436 LRRC7Q96NW7 1537 aa24.36■■□□□ 1.49
CHI3L1-202ENST00000404436 TOM1O60784 492 aa24.36■■□□□ 1.49
CHI3L1-202ENST00000404436 NUTM2DQ5VT03 806 aaPredicted RBP24.36■■□□□ 1.49
CHI3L1-202ENST00000404436 SLC4A1APQ9BWU0 796 aaKnown RBP24.36■■□□□ 1.49
CHI3L1-202ENST00000404436 PLEKHG1Q9ULL1 1385 aa24.34■■□□□ 1.49
CHI3L1-202ENST00000404436 KCNA6P17658 529 aa24.33■■□□□ 1.49
CHI3L1-202ENST00000404436 PIP4K2BP78356 416 aa24.31■■□□□ 1.48
CHI3L1-202ENST00000404436 SCAF1Q9H7N4 1312 aaKnown RBP24.31■■□□□ 1.48
CHI3L1-202ENST00000404436 ZNF326Q5BKZ1 582 aaKnown RBP24.3■■□□□ 1.48
CHI3L1-202ENST00000404436 TRPM2O94759 1503 aa24.28■■□□□ 1.48
CHI3L1-202ENST00000404436 CLTCL1P53675 1640 aa24.28■■□□□ 1.48
CHI3L1-202ENST00000404436 KIF1BO60333 1816 aa24.27■■□□□ 1.48
CHI3L1-202ENST00000404436 XIRP1Q702N8 1843 aaKnown RBP24.27■■□□□ 1.48
CHI3L1-202ENST00000404436 TBX22Q9Y458 520 aa24.27■■□□□ 1.48
CHI3L1-202ENST00000404436 PROSER2Q86WR7 435 aaPredicted RBP24.26■■□□□ 1.47
CHI3L1-202ENST00000404436 CHD2O14647 1828 aaKnown RBP24.24■■□□□ 1.47
CHI3L1-202ENST00000404436 FOXD1Q16676 465 aa24.24■■□□□ 1.47
CHI3L1-202ENST00000404436 SETD5Q9C0A6 1442 aa24.24■■□□□ 1.47
CHI3L1-202ENST00000404436 MPHOSPH9Q99550 1183 aa24.23■■□□□ 1.47
CHI3L1-202ENST00000404436 ALKQ9UM73 1620 aa24.22■■□□□ 1.47
CHI3L1-202ENST00000404436 ADAMTS13Q76LX8 1427 aa24.22■■□□□ 1.47
CHI3L1-202ENST00000404436 TMEM94Q12767 1356 aa24.22■■□□□ 1.47
CHI3L1-202ENST00000404436 RBM33Q96EV2 1170 aaKnown RBP24.21■■□□□ 1.47
CHI3L1-202ENST00000404436 NWD1Q149M9 1564 aa24.2■■□□□ 1.47
CHI3L1-202ENST00000404436 ACIN1Q9UKV3 1341 aaKnown RBP24.2■■□□□ 1.46
CHI3L1-202ENST00000404436 NKTRP30414 1462 aaKnown RBP24.18■■□□□ 1.46
CHI3L1-202ENST00000404436 DIP2AQ14689 1571 aa24.17■■□□□ 1.46
CHI3L1-202ENST00000404436 HSPA1LP34931 641 aa24.17■■□□□ 1.46
CHI3L1-202ENST00000404436 NEXMIFQ5QGS0 1516 aa24.15■■□□□ 1.46
CHI3L1-202ENST00000404436 PIK3R4Q99570 1358 aa24.15■■□□□ 1.46
CHI3L1-202ENST00000404436 RAB3GAP2Q9H2M9 1393 aa24.14■■□□□ 1.45
CHI3L1-202ENST00000404436 AMOTL2Q9Y2J4 779 aa24.12■■□□□ 1.45
CHI3L1-202ENST00000404436 NRXN3Q9Y4C0 1643 aa24.12■■□□□ 1.45
CHI3L1-202ENST00000404436 SETBP1Q9Y6X0 1596 aa24.12■■□□□ 1.45
CHI3L1-202ENST00000404436 RPGRIP1LQ68CZ1 1315 aa24.11■■□□□ 1.45
CHI3L1-202ENST00000404436 VGFO15240 615 aaPredicted RBP24.11■■□□□ 1.45
CHI3L1-202ENST00000404436 CCDC144AA2RUR9 1427 aa24.1■■□□□ 1.45
CHI3L1-202ENST00000404436 MSH6P52701 1360 aa24.09■■□□□ 1.45
CHI3L1-202ENST00000404436 PTPRUQ92729 1446 aa24.09■■□□□ 1.45
CHI3L1-202ENST00000404436 METP08581 1390 aa24.06■■□□□ 1.44
CHI3L1-202ENST00000404436 RGL3Q3MIN7 710 aa24.06■■□□□ 1.44
CHI3L1-202ENST00000404436 C14orf37Q86TY3 774 aa24.06■■□□□ 1.44
CHI3L1-202ENST00000404436 DISP3Q9P2K9 1392 aa24.05■■□□□ 1.44
CHI3L1-202ENST00000404436 NCOA3Q9Y6Q9 1424 aa24.05■■□□□ 1.44
CHI3L1-202ENST00000404436 PPLO60437 1756 aa24.05■■□□□ 1.44
CHI3L1-202ENST00000404436 FAM135BQ49AJ0 1406 aa24.03■■□□□ 1.44
CHI3L1-202ENST00000404436 HRCP23327 699 aa24.02■■□□□ 1.44
CHI3L1-202ENST00000404436 SLAIN2Q9P270 581 aa24.02■■□□□ 1.44
CHI3L1-202ENST00000404436 C19orf44Q9H6X5 657 aa24.01■■□□□ 1.43
CHI3L1-202ENST00000404436 SPATA31E1Q6ZUB1 1445 aa24.01■■□□□ 1.43
CHI3L1-202ENST00000404436 XRN1Q8IZH2 1706 aaKnown RBP23.99■■□□□ 1.43
CHI3L1-202ENST00000404436 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.98■■□□□ 1.43
CHI3L1-202ENST00000404436 ROBO1Q9Y6N7 1651 aa23.97■■□□□ 1.43
CHI3L1-202ENST00000404436 ADGRF5Q8IZF2 1346 aa23.96■■□□□ 1.43
CHI3L1-202ENST00000404436 ATF3P18847 181 aa23.96■■□□□ 1.43
CHI3L1-202ENST00000404436 CADPS2Q86UW7 1296 aa23.96■■□□□ 1.43
CHI3L1-202ENST00000404436 SETD1AO15047 1707 aaKnown RBP23.95■■□□□ 1.42
CHI3L1-202ENST00000404436 ANKRD30BQ9BXX2 1392 aa23.94■■□□□ 1.42
CHI3L1-202ENST00000404436 IFT172Q9UG01 1749 aa23.93■■□□□ 1.42
CHI3L1-202ENST00000404436 MED1Q15648 1581 aaPredicted RBP23.86■■□□□ 1.41
CHI3L1-202ENST00000404436 DCCP43146 1447 aa23.86■■□□□ 1.41
CHI3L1-202ENST00000404436 ROBO2Q9HCK4 1378 aa23.86■■□□□ 1.41
CHI3L1-202ENST00000404436 ILDR2Q71H61 639 aa23.85■■□□□ 1.41
CHI3L1-202ENST00000404436 PTCH1Q13635 1447 aa23.84■■□□□ 1.41
CHI3L1-202ENST00000404436 ADGRL3Q9HAR2 1447 aa23.84■■□□□ 1.41
CHI3L1-202ENST00000404436 PHLPP1O60346 1717 aa23.84■■□□□ 1.41
CHI3L1-202ENST00000404436 PIK3C2GO75747 1445 aa23.83■■□□□ 1.4
CHI3L1-202ENST00000404436 TMEM132EQ6IEE7 984 aa23.82■■□□□ 1.4
CHI3L1-202ENST00000404436 STK26Q9P289 416 aa23.82■■□□□ 1.4
CHI3L1-202ENST00000404436 NALCNQ8IZF0 1738 aa23.81■■□□□ 1.4
CHI3L1-202ENST00000404436 PRAG1Q86YV5 1406 aa23.81■■□□□ 1.4
CHI3L1-202ENST00000404436 BRINP3Q76B58 766 aa23.8■■□□□ 1.4
CHI3L1-202ENST00000404436 MST1RQ04912 1400 aa23.79■■□□□ 1.4
CHI3L1-202ENST00000404436 C14orf93Q9H972 538 aaKnown RBP23.79■■□□□ 1.4
CHI3L1-202ENST00000404436 MYOM2P54296 1465 aa23.78■■□□□ 1.4
CHI3L1-202ENST00000404436 NRXN1Q9ULB1 1477 aa23.77■■□□□ 1.4
CHI3L1-202ENST00000404436 CFAP70Q5T0N1 1121 aa23.77■■□□□ 1.4
CHI3L1-202ENST00000404436 PHF23Q9BUL5 403 aaPredicted RBP23.77■■□□□ 1.4
CHI3L1-202ENST00000404436 LRPPRCP42704 1394 aaKnown RBP23.77■■□□□ 1.4
CHI3L1-202ENST00000404436 DCAF11Q8TEB1 546 aa23.76■■□□□ 1.39
CHI3L1-202ENST00000404436 KDM2AQ9Y2K7 1162 aa23.76■■□□□ 1.39
CHI3L1-202ENST00000404436 ABCC11Q96J66 1382 aa23.76■■□□□ 1.39
CHI3L1-202ENST00000404436 WAPLQ7Z5K2 1190 aa23.75■■□□□ 1.39
CHI3L1-202ENST00000404436 ASXL1Q8IXJ9 1541 aa23.74■■□□□ 1.39
CHI3L1-202ENST00000404436 TECPR2O15040 1411 aa23.74■■□□□ 1.39
CHI3L1-202ENST00000404436 COL16A1Q07092 1604 aaPredicted RBP23.73■■□□□ 1.39
CHI3L1-202ENST00000404436 AHDC1Q5TGY3 1603 aaPredicted RBP23.73■■□□□ 1.39
CHI3L1-202ENST00000404436 JCADQ9P266 1359 aa23.73■■□□□ 1.39
CHI3L1-202ENST00000404436 YTHDC2Q9H6S0 1430 aaKnown RBP23.73■■□□□ 1.39
CHI3L1-202ENST00000404436 DHX57Q6P158 1386 aaKnown RBP23.71■■□□□ 1.39
CHI3L1-202ENST00000404436 STAC3Q96MF2 364 aa23.71■■□□□ 1.39
CHI3L1-202ENST00000404436 KNDC1Q76NI1 1749 aa23.7■■□□□ 1.39
CHI3L1-202ENST00000404436 LAMC1P11047 1609 aa23.7■■□□□ 1.39
CHI3L1-202ENST00000404436 C1orf167Q5SNV9 1468 aa23.7■■□□□ 1.38
CHI3L1-202ENST00000404436 PLEKHH1Q9ULM0 1364 aa23.68■■□□□ 1.38
CHI3L1-202ENST00000404436 SIRT1Q96EB6 747 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms