RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 CHD2O14647 1828 aaKnown RBP23.37■■□□□ 1.33
ATG4B-202ENST00000400771 LRRC7Q96NW7 1537 aa23.37■■□□□ 1.33
ATG4B-202ENST00000400771 STAG3Q9UJ98 1225 aa23.35■■□□□ 1.33
ATG4B-202ENST00000400771 DIP2AQ14689 1571 aa23.33■■□□□ 1.33
ATG4B-202ENST00000400771 EID1Q9Y6B2 187 aa23.33■■□□□ 1.33
ATG4B-202ENST00000400771 NEXMIFQ5QGS0 1516 aa23.33■■□□□ 1.32
ATG4B-202ENST00000400771 PLEKHG1Q9ULL1 1385 aa23.32■■□□□ 1.32
ATG4B-202ENST00000400771 PPLO60437 1756 aa23.29■■□□□ 1.32
ATG4B-202ENST00000400771 SETD1AO15047 1707 aaKnown RBP23.28■■□□□ 1.32
ATG4B-202ENST00000400771 SETBP1Q9Y6X0 1596 aa23.28■■□□□ 1.32
ATG4B-202ENST00000400771 ADAMTS13Q76LX8 1427 aa23.28■■□□□ 1.32
ATG4B-202ENST00000400771 IFT172Q9UG01 1749 aa23.28■■□□□ 1.32
ATG4B-202ENST00000400771 NKTRP30414 1462 aaKnown RBP23.27■■□□□ 1.32
ATG4B-202ENST00000400771 SETD5Q9C0A6 1442 aa23.25■■□□□ 1.31
ATG4B-202ENST00000400771 XRN1Q8IZH2 1706 aaKnown RBP23.24■■□□□ 1.31
ATG4B-202ENST00000400771 TRIM52Q96A61 297 aa23.23■■□□□ 1.31
ATG4B-202ENST00000400771 CHGAP10645 457 aaKnown RBP23.21■■□□□ 1.31
ATG4B-202ENST00000400771 SLC26A8Q96RN1 970 aa23.21■■□□□ 1.31
ATG4B-202ENST00000400771 SLC4A1APQ9BWU0 796 aaKnown RBP23.2■■□□□ 1.3
ATG4B-202ENST00000400771 RAB3GAP2Q9H2M9 1393 aa23.19■■□□□ 1.3
ATG4B-202ENST00000400771 UBAP1LF5GYI3 381 aa23.18■■□□□ 1.3
ATG4B-202ENST00000400771 NUTM2DQ5VT03 806 aaPredicted RBP23.17■■□□□ 1.3
ATG4B-202ENST00000400771 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.16■■□□□ 1.3
ATG4B-202ENST00000400771 PPP1R15AO75807 674 aaPredicted RBP23.15■■□□□ 1.3
ATG4B-202ENST00000400771 KCNA6P17658 529 aa23.14■■□□□ 1.29
ATG4B-202ENST00000400771 FOXD1Q16676 465 aa23.14■■□□□ 1.29
ATG4B-202ENST00000400771 SENP3Q9H4L4 574 aaPredicted RBP23.14■■□□□ 1.29
ATG4B-202ENST00000400771 SPATA31E1Q6ZUB1 1445 aa23.13■■□□□ 1.29
ATG4B-202ENST00000400771 PTPRUQ92729 1446 aa23.13■■□□□ 1.29
ATG4B-202ENST00000400771 TMEM94Q12767 1356 aa23.13■■□□□ 1.29
ATG4B-202ENST00000400771 MPHOSPH9Q99550 1183 aa23.11■■□□□ 1.29
ATG4B-202ENST00000400771 PIK3R4Q99570 1358 aa23.11■■□□□ 1.29
ATG4B-202ENST00000400771 HDGFP51858 240 aaKnown RBP23.1■■□□□ 1.29
ATG4B-202ENST00000400771 TBX22Q9Y458 520 aa23.1■■□□□ 1.29
ATG4B-202ENST00000400771 CCDC144AA2RUR9 1427 aa23.09■■□□□ 1.29
ATG4B-202ENST00000400771 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.08■■□□□ 1.29
ATG4B-202ENST00000400771 ROBO1Q9Y6N7 1651 aa23.07■■□□□ 1.28
ATG4B-202ENST00000400771 NALCNQ8IZF0 1738 aa23.07■■□□□ 1.28
ATG4B-202ENST00000400771 ZNF326Q5BKZ1 582 aaKnown RBP23.06■■□□□ 1.28
ATG4B-202ENST00000400771 TOM1O60784 492 aa23.05■■□□□ 1.28
ATG4B-202ENST00000400771 BCANQ96GW7 911 aa23.05■■□□□ 1.28
ATG4B-202ENST00000400771 METP08581 1390 aa23.03■■□□□ 1.28
ATG4B-202ENST00000400771 ACIN1Q9UKV3 1341 aaKnown RBP23.03■■□□□ 1.28
ATG4B-202ENST00000400771 ASXL1Q8IXJ9 1541 aa23.03■■□□□ 1.28
ATG4B-202ENST00000400771 PRAG1Q86YV5 1406 aa23.01■■□□□ 1.27
ATG4B-202ENST00000400771 PIP4K2BP78356 416 aa23.01■■□□□ 1.27
ATG4B-202ENST00000400771 RBM33Q96EV2 1170 aaKnown RBP23.01■■□□□ 1.27
ATG4B-202ENST00000400771 NCOA3Q9Y6Q9 1424 aa23■■□□□ 1.27
ATG4B-202ENST00000400771 KNDC1Q76NI1 1749 aa23■■□□□ 1.27
ATG4B-202ENST00000400771 PROSER2Q86WR7 435 aaPredicted RBP23■■□□□ 1.27
ATG4B-202ENST00000400771 RPGRIP1LQ68CZ1 1315 aa22.98■■□□□ 1.27
ATG4B-202ENST00000400771 HSPA1LP34931 641 aa22.97■■□□□ 1.27
ATG4B-202ENST00000400771 SCAF1Q9H7N4 1312 aaKnown RBP22.97■■□□□ 1.27
ATG4B-202ENST00000400771 ANKRD30BQ9BXX2 1392 aa22.96■■□□□ 1.27
ATG4B-202ENST00000400771 MYOM2P54296 1465 aa22.96■■□□□ 1.27
ATG4B-202ENST00000400771 NRXN1Q9ULB1 1477 aa22.96■■□□□ 1.27
ATG4B-202ENST00000400771 LAMC1P11047 1609 aa22.96■■□□□ 1.27
ATG4B-202ENST00000400771 PIK3C2GO75747 1445 aa22.95■■□□□ 1.26
ATG4B-202ENST00000400771 MSH6P52701 1360 aa22.95■■□□□ 1.26
ATG4B-202ENST00000400771 PTCH1Q13635 1447 aa22.95■■□□□ 1.26
ATG4B-202ENST00000400771 MED1Q15648 1581 aaPredicted RBP22.94■■□□□ 1.26
ATG4B-202ENST00000400771 FAM135BQ49AJ0 1406 aa22.94■■□□□ 1.26
ATG4B-202ENST00000400771 HRCP23327 699 aa22.93■■□□□ 1.26
ATG4B-202ENST00000400771 AMOTL2Q9Y2J4 779 aa22.93■■□□□ 1.26
ATG4B-202ENST00000400771 DCCP43146 1447 aa22.91■■□□□ 1.26
ATG4B-202ENST00000400771 PHLPP1O60346 1717 aa22.91■■□□□ 1.26
ATG4B-202ENST00000400771 ADGRF5Q8IZF2 1346 aa22.91■■□□□ 1.26
ATG4B-202ENST00000400771 VGFO15240 615 aaPredicted RBP22.91■■□□□ 1.26
ATG4B-202ENST00000400771 COL16A1Q07092 1604 aaPredicted RBP22.9■■□□□ 1.26
ATG4B-202ENST00000400771 ADGRL3Q9HAR2 1447 aa22.9■■□□□ 1.26
ATG4B-202ENST00000400771 NHSL1Q5SYE7 1610 aa22.87■■□□□ 1.25
ATG4B-202ENST00000400771 AHDC1Q5TGY3 1603 aaPredicted RBP22.87■■□□□ 1.25
ATG4B-202ENST00000400771 ROBO2Q9HCK4 1378 aa22.86■■□□□ 1.25
ATG4B-202ENST00000400771 TECPR2O15040 1411 aa22.85■■□□□ 1.25
ATG4B-202ENST00000400771 RGL3Q3MIN7 710 aa22.85■■□□□ 1.25
ATG4B-202ENST00000400771 MST1RQ04912 1400 aa22.83■■□□□ 1.25
ATG4B-202ENST00000400771 CDC42BPGQ6DT37 1551 aa22.83■■□□□ 1.25
ATG4B-202ENST00000400771 ADGRB1O14514 1584 aa22.81■■□□□ 1.24
ATG4B-202ENST00000400771 C19orf44Q9H6X5 657 aa22.8■■□□□ 1.24
ATG4B-202ENST00000400771 DISP3Q9P2K9 1392 aa22.78■■□□□ 1.24
ATG4B-202ENST00000400771 SHPRHQ149N8 1683 aa22.78■■□□□ 1.24
ATG4B-202ENST00000400771 SLAIN2Q9P270 581 aa22.78■■□□□ 1.24
ATG4B-202ENST00000400771 LRPPRCP42704 1394 aaKnown RBP22.77■■□□□ 1.24
ATG4B-202ENST00000400771 FMN2Q9NZ56 1722 aa22.77■■□□□ 1.23
ATG4B-202ENST00000400771 C14orf37Q86TY3 774 aa22.76■■□□□ 1.23
ATG4B-202ENST00000400771 CADPS2Q86UW7 1296 aa22.76■■□□□ 1.23
ATG4B-202ENST00000400771 DHX57Q6P158 1386 aaKnown RBP22.76■■□□□ 1.23
ATG4B-202ENST00000400771 YTHDC2Q9H6S0 1430 aaKnown RBP22.75■■□□□ 1.23
ATG4B-202ENST00000400771 KIAA1210Q9ULL0 1709 aa22.74■■□□□ 1.23
ATG4B-202ENST00000400771 ARHGEF28Q8N1W1 1705 aaKnown RBP22.73■■□□□ 1.23
ATG4B-202ENST00000400771 DLC1Q96QB1 1528 aa22.72■■□□□ 1.23
ATG4B-202ENST00000400771 ABCC11Q96J66 1382 aa22.72■■□□□ 1.23
ATG4B-202ENST00000400771 ATF3P18847 181 aa22.71■■□□□ 1.23
ATG4B-202ENST00000400771 C14orf93Q9H972 538 aaKnown RBP22.7■■□□□ 1.22
ATG4B-202ENST00000400771 PLEKHH1Q9ULM0 1364 aa22.7■■□□□ 1.22
ATG4B-202ENST00000400771 C1orf167Q5SNV9 1468 aa22.7■■□□□ 1.22
ATG4B-202ENST00000400771 RGPD8O14715 1765 aaPredicted RBP22.7■■□□□ 1.22
ATG4B-202ENST00000400771 ADGRB2O60241 1585 aa22.69■■□□□ 1.22
ATG4B-202ENST00000400771 BRINP3Q76B58 766 aa22.69■■□□□ 1.22
ATG4B-202ENST00000400771 TMEM132EQ6IEE7 984 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms