RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 NEUROD6Q96NK8 337 aa13.83□□□□□ -0.2
RGPD2-201ENST00000398146 MPHOSPH10O00566 681 aaKnown RBP13.82□□□□□ -0.2
RGPD2-201ENST00000398146 TTLL12Q14166 644 aaPredicted RBP13.82□□□□□ -0.2
RGPD2-201ENST00000398146 CARMIL2Q6F5E8 1435 aa13.82□□□□□ -0.2
RGPD2-201ENST00000398146 NOP58Q9Y2X3 529 aaKnown RBP13.82□□□□□ -0.2
RGPD2-201ENST00000398146 DIAPH3Q9NSV4 1193 aa13.81□□□□□ -0.2
RGPD2-201ENST00000398146 FAM69CQ0P6D2 419 aa13.81□□□□□ -0.2
RGPD2-201ENST00000398146 CPLX2Q6PUV4 134 aaKnown RBP13.81□□□□□ -0.2
RGPD2-201ENST00000398146 STK11IPQ8N1F8 1099 aa13.81□□□□□ -0.2
RGPD2-201ENST00000398146 KIF27Q86VH2 1401 aa13.81□□□□□ -0.2
RGPD2-201ENST00000398146 ZNF428Q96B54 188 aa13.81□□□□□ -0.2
RGPD2-201ENST00000398146 RRP12Q5JTH9 1297 aaKnown RBP13.8□□□□□ -0.2
RGPD2-201ENST00000398146 ANO2Q9NQ90 1003 aa13.8□□□□□ -0.2
RGPD2-201ENST00000398146 IFIT2P09913 472 aaKnown RBP13.8□□□□□ -0.2
RGPD2-201ENST00000398146 WASHC4Q2M389 1173 aa13.8□□□□□ -0.2
RGPD2-201ENST00000398146 CCDC70Q6NSX1 233 aa13.8□□□□□ -0.2
RGPD2-201ENST00000398146 CA8P35219 290 aa13.79□□□□□ -0.2
RGPD2-201ENST00000398146 RIC3Q7Z5B4 369 aa13.79□□□□□ -0.2
RGPD2-201ENST00000398146 NUP155O75694 1391 aa13.78□□□□□ -0.2
RGPD2-201ENST00000398146 GOLGA6L19H0YKK7 550 aa13.78□□□□□ -0.2
RGPD2-201ENST00000398146 IPO7O95373 1038 aaKnown RBP13.78□□□□□ -0.2
RGPD2-201ENST00000398146 DDX58O95786 925 aaKnown RBP13.77□□□□□ -0.2
RGPD2-201ENST00000398146 BECN2A8MW95 431 aa13.77□□□□□ -0.21
RGPD2-201ENST00000398146 MATR3P43243 847 aaKnown RBP eCLIP13.76□□□□□ -0.21
RGPD2-201ENST00000398146 ANKRD20A12PQ8NF67 263 aa13.76□□□□□ -0.21
RGPD2-201ENST00000398146 ZSCAN29Q8IWY8 852 aaPredicted RBP13.76□□□□□ -0.21
RGPD2-201ENST00000398146 SKIDA1Q1XH10 827 aa13.76□□□□□ -0.21
RGPD2-201ENST00000398146 PMFBP1Q8TBY8 1022 aa13.76□□□□□ -0.21
RGPD2-201ENST00000398146 BCL2L13Q9BXK5 485 aa13.76□□□□□ -0.21
RGPD2-201ENST00000398146 G3BP1Q13283 466 aaKnown RBP eCLIP13.76□□□□□ -0.21
RGPD2-201ENST00000398146 SETQ01105 290 aaPredicted RBP13.75□□□□□ -0.21
RGPD2-201ENST00000398146 ST18O60284 1047 aa13.75□□□□□ -0.21
RGPD2-201ENST00000398146 KIF6Q6ZMV9 814 aa13.75□□□□□ -0.21
RGPD2-201ENST00000398146 BICDL1Q6ZP65 573 aa13.74□□□□□ -0.21
RGPD2-201ENST00000398146 NEBLO76041 1014 aa13.74□□□□□ -0.21
RGPD2-201ENST00000398146 ANKRD45Q5TZF3 282 aa13.74□□□□□ -0.21
RGPD2-201ENST00000398146 ESCO1Q5FWF5 840 aa13.74□□□□□ -0.21
RGPD2-201ENST00000398146 ZNF592Q92610 1267 aa13.74□□□□□ -0.21
RGPD2-201ENST00000398146 WDHD1O75717 1129 aaPredicted RBP13.74□□□□□ -0.21
RGPD2-201ENST00000398146 CHMP4CQ96CF2 233 aa13.74□□□□□ -0.21
RGPD2-201ENST00000398146 HSPA5P11021 654 aaKnown RBP13.74□□□□□ -0.21
RGPD2-201ENST00000398146 DDX54Q8TDD1 881 aaKnown RBP13.73□□□□□ -0.21
RGPD2-201ENST00000398146 OFD1O75665 1012 aa13.73□□□□□ -0.21
RGPD2-201ENST00000398146 WDR78Q5VTH9 848 aa13.73□□□□□ -0.21
RGPD2-201ENST00000398146 PDE3BQ13370 1112 aa13.73□□□□□ -0.21
RGPD2-201ENST00000398146 ZNF219Q9P2Y4 722 aaPredicted RBP13.73□□□□□ -0.21
RGPD2-201ENST00000398146 GOLGA3Q08378 1498 aa13.73□□□□□ -0.21
RGPD2-201ENST00000398146 PROSER2Q86WR7 435 aaPredicted RBP13.72□□□□□ -0.21
RGPD2-201ENST00000398146 KRT18P05783 430 aaKnown RBP13.72□□□□□ -0.21
RGPD2-201ENST00000398146 PTMSP20962 102 aa13.72□□□□□ -0.21
RGPD2-201ENST00000398146 BCL11BQ9C0K0 894 aaPredicted RBP13.71□□□□□ -0.21
RGPD2-201ENST00000398146 CDK5RAP3Q96JB5 506 aa13.71□□□□□ -0.22
RGPD2-201ENST00000398146 SCLT1Q96NL6 688 aa13.71□□□□□ -0.22
RGPD2-201ENST00000398146 FKBP5Q13451 457 aaPredicted RBP13.7□□□□□ -0.22
RGPD2-201ENST00000398146 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
RGPD2-201ENST00000398146 BRMS1Q9HCU9 246 aa13.7□□□□□ -0.22
RGPD2-201ENST00000398146 CCDC180Q9P1Z9 1646 aa13.7□□□□□ -0.22
RGPD2-201ENST00000398146 CENPJQ9HC77 1338 aaPredicted RBP13.7□□□□□ -0.22
RGPD2-201ENST00000398146 SAFBQ15424 915 aaKnown RBP eCLIP13.7□□□□□ -0.22
RGPD2-201ENST00000398146 ZHX3Q9H4I2 956 aa13.69□□□□□ -0.22
RGPD2-201ENST00000398146 RB1CC1Q8TDY2 1594 aa13.69□□□□□ -0.22
RGPD2-201ENST00000398146 HOMER1Q86YM7 354 aa13.69□□□□□ -0.22
RGPD2-201ENST00000398146 RCAN3Q9UKA8 241 aa13.69□□□□□ -0.22
RGPD2-201ENST00000398146 PDCL3Q9H2J4 239 aa13.69□□□□□ -0.22
RGPD2-201ENST00000398146 PHF14O94880 888 aa13.69□□□□□ -0.22
RGPD2-201ENST00000398146 SYCP1Q15431 976 aa13.69□□□□□ -0.22
RGPD2-201ENST00000398146 RALYLQ86SE5 291 aaKnown RBP13.69□□□□□ -0.22
RGPD2-201ENST00000398146 HOOK1Q9UJC3 728 aaKnown RBP13.69□□□□□ -0.22
RGPD2-201ENST00000398146 ATP2B1P20020 1258 aa13.68□□□□□ -0.22
RGPD2-201ENST00000398146 C16orf71Q8IYS4 520 aaPredicted RBP13.68□□□□□ -0.22
RGPD2-201ENST00000398146 ANKRD62A6NC57 917 aa13.68□□□□□ -0.22
RGPD2-201ENST00000398146 ECM2O94769 699 aaPredicted RBP13.68□□□□□ -0.22
RGPD2-201ENST00000398146 TTLL5Q6EMB2 1281 aa13.68□□□□□ -0.22
RGPD2-201ENST00000398146 TOM1L2Q6ZVM7 507 aa13.67□□□□□ -0.22
RGPD2-201ENST00000398146 BICD2Q8TD16 824 aa13.67□□□□□ -0.22
RGPD2-201ENST00000398146 RUFY2Q8WXA3 655 aa13.67□□□□□ -0.22
RGPD2-201ENST00000398146 CNNM1Q9NRU3 951 aa13.67□□□□□ -0.22
RGPD2-201ENST00000398146 CUX2O14529 1486 aa13.67□□□□□ -0.22
RGPD2-201ENST00000398146 ZKSCAN1P17029 563 aaPredicted RBP13.66□□□□□ -0.22
RGPD2-201ENST00000398146 TSPYL4Q9UJ04 414 aa13.66□□□□□ -0.22
RGPD2-201ENST00000398146 TTC16Q8NEE8 873 aa13.65□□□□□ -0.22
RGPD2-201ENST00000398146 RDXP35241 583 aaKnown RBP13.65□□□□□ -0.22
RGPD2-201ENST00000398146 WRNQ14191 1432 aaPredicted RBP eCLIP13.65□□□□□ -0.22
RGPD2-201ENST00000398146 DNAJC2Q99543 621 aaKnown RBP13.65□□□□□ -0.22
RGPD2-201ENST00000398146 CEP162Q5TB80 1403 aa13.65□□□□□ -0.22
RGPD2-201ENST00000398146 SLC3A2P08195 630 aaKnown RBP13.64□□□□□ -0.23
RGPD2-201ENST00000398146 TBC1D2BQ9UPU7 963 aa13.64□□□□□ -0.23
RGPD2-201ENST00000398146 ANKRD30AQ9BXX3 1397 aa13.64□□□□□ -0.23
RGPD2-201ENST00000398146 HMOX1P09601 288 aa13.64□□□□□ -0.23
RGPD2-201ENST00000398146 CARMIL1Q5VZK9 1371 aa13.63□□□□□ -0.23
RGPD2-201ENST00000398146 NEFHP12036 1026 aa13.63□□□□□ -0.23
RGPD2-201ENST00000398146 RUFY1Q96T51 708 aa13.63□□□□□ -0.23
RGPD2-201ENST00000398146 EVC2Q86UK5 1308 aa13.63□□□□□ -0.23
RGPD2-201ENST00000398146 ABTB2Q8N961 1025 aa13.63□□□□□ -0.23
RGPD2-201ENST00000398146 VGFO15240 615 aaPredicted RBP13.63□□□□□ -0.23
RGPD2-201ENST00000398146 EEA1Q15075 1411 aa13.63□□□□□ -0.23
RGPD2-201ENST00000398146 HSP90AB4PQ58FF6 505 aa13.62□□□□□ -0.23
RGPD2-201ENST00000398146 VPS37CA5D8V6 355 aaPredicted RBP13.62□□□□□ -0.23
RGPD2-201ENST00000398146 XBP1P17861 261 aa13.62□□□□□ -0.23
RGPD2-201ENST00000398146 NLRP6P59044 892 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms