RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 SLC26A8Q96RN1 970 aa38.03■■■■□ 3.68
U2AF1-203ENST00000398137 RIMS2Q9UQ26 1411 aa38.02■■■■□ 3.68
U2AF1-203ENST00000398137 SETD5Q9C0A6 1442 aa37.99■■■■□ 3.67
U2AF1-203ENST00000398137 SCAF1Q9H7N4 1312 aaKnown RBP37.97■■■■□ 3.67
U2AF1-203ENST00000398137 SPHKAPQ2M3C7 1700 aa37.96■■■■□ 3.67
U2AF1-203ENST00000398137 HSPA1LP34931 641 aa37.96■■■■□ 3.67
U2AF1-203ENST00000398137 PLEKHG1Q9ULL1 1385 aa37.95■■■■□ 3.67
U2AF1-203ENST00000398137 NWD1Q149M9 1564 aa37.94■■■■□ 3.66
U2AF1-203ENST00000398137 DISP3Q9P2K9 1392 aa37.93■■■■□ 3.66
U2AF1-203ENST00000398137 KCNA6P17658 529 aa37.93■■■■□ 3.66
U2AF1-203ENST00000398137 CHGAP10645 457 aaKnown RBP37.92■■■■□ 3.66
U2AF1-203ENST00000398137 SENP3Q9H4L4 574 aaPredicted RBP37.92■■■■□ 3.66
U2AF1-203ENST00000398137 RAB3GAP2Q9H2M9 1393 aa37.9■■■■□ 3.66
U2AF1-203ENST00000398137 CHD2O14647 1828 aaKnown RBP37.87■■■■□ 3.65
U2AF1-203ENST00000398137 TMEM94Q12767 1356 aa37.86■■■■□ 3.65
U2AF1-203ENST00000398137 NUTM2DQ5VT03 806 aaPredicted RBP37.86■■■■□ 3.65
U2AF1-203ENST00000398137 ADAMTS13Q76LX8 1427 aa37.85■■■■□ 3.65
U2AF1-203ENST00000398137 TRIM52Q96A61 297 aa37.84■■■■□ 3.65
U2AF1-203ENST00000398137 NKTRP30414 1462 aaKnown RBP37.84■■■■□ 3.65
U2AF1-203ENST00000398137 PPP1R15AO75807 674 aaPredicted RBP37.83■■■■□ 3.65
U2AF1-203ENST00000398137 BCANQ96GW7 911 aa37.83■■■■□ 3.65
U2AF1-203ENST00000398137 HDGFP51858 240 aaKnown RBP37.82■■■■□ 3.64
U2AF1-203ENST00000398137 RBM33Q96EV2 1170 aaKnown RBP37.82■■■■□ 3.64
U2AF1-203ENST00000398137 CLTCL1P53675 1640 aa37.81■■■■□ 3.64
U2AF1-203ENST00000398137 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.81■■■■□ 3.64
U2AF1-203ENST00000398137 ILDR2Q71H61 639 aa37.8■■■■□ 3.64
U2AF1-203ENST00000398137 TRPM2O94759 1503 aa37.78■■■■□ 3.64
U2AF1-203ENST00000398137 TBX22Q9Y458 520 aa37.78■■■■□ 3.64
U2AF1-203ENST00000398137 PROSER2Q86WR7 435 aaPredicted RBP37.77■■■■□ 3.64
U2AF1-203ENST00000398137 DIP2AQ14689 1571 aa37.74■■■■□ 3.63
U2AF1-203ENST00000398137 NRXN3Q9Y4C0 1643 aa37.73■■■■□ 3.63
U2AF1-203ENST00000398137 MED1Q15648 1581 aaPredicted RBP37.68■■■■□ 3.62
U2AF1-203ENST00000398137 ACIN1Q9UKV3 1341 aaKnown RBP37.66■■■■□ 3.62
U2AF1-203ENST00000398137 NEXMIFQ5QGS0 1516 aa37.66■■■■□ 3.62
U2AF1-203ENST00000398137 SETBP1Q9Y6X0 1596 aa37.65■■■■□ 3.62
U2AF1-203ENST00000398137 PCGF6Q9BYE7 350 aa37.65■■■■□ 3.62
U2AF1-203ENST00000398137 KIF1BO60333 1816 aa37.64■■■■□ 3.62
U2AF1-203ENST00000398137 FAM135BQ49AJ0 1406 aa37.64■■■■□ 3.62
U2AF1-203ENST00000398137 PTPRUQ92729 1446 aa37.64■■■■□ 3.62
U2AF1-203ENST00000398137 HRCP23327 699 aa37.64■■■■□ 3.62
U2AF1-203ENST00000398137 SLC4A1APQ9BWU0 796 aaKnown RBP37.64■■■■□ 3.62
U2AF1-203ENST00000398137 PIK3R4Q99570 1358 aa37.63■■■■□ 3.61
U2AF1-203ENST00000398137 ROBO1Q9Y6N7 1651 aa37.6■■■■□ 3.61
U2AF1-203ENST00000398137 ZNF326Q5BKZ1 582 aaKnown RBP37.59■■■■□ 3.61
U2AF1-203ENST00000398137 MSH6P52701 1360 aa37.57■■■■□ 3.61
U2AF1-203ENST00000398137 MPHOSPH9Q99550 1183 aa37.57■■■■□ 3.6
U2AF1-203ENST00000398137 XRN1Q8IZH2 1706 aaKnown RBP37.55■■■■□ 3.6
U2AF1-203ENST00000398137 NCOA3Q9Y6Q9 1424 aa37.54■■■■□ 3.6
U2AF1-203ENST00000398137 FOXD1Q16676 465 aa37.52■■■■□ 3.6
U2AF1-203ENST00000398137 AMOTL2Q9Y2J4 779 aa37.52■■■■□ 3.6
U2AF1-203ENST00000398137 METP08581 1390 aa37.51■■■■□ 3.59
U2AF1-203ENST00000398137 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.5■■■■□ 3.59
U2AF1-203ENST00000398137 SLAIN2Q9P270 581 aa37.47■■■■□ 3.59
U2AF1-203ENST00000398137 SETD1AO15047 1707 aaKnown RBP37.44■■■■□ 3.58
U2AF1-203ENST00000398137 PPLO60437 1756 aa37.42■■■■□ 3.58
U2AF1-203ENST00000398137 C19orf44Q9H6X5 657 aa37.39■■■■□ 3.58
U2AF1-203ENST00000398137 SOCS7O14512 581 aa37.37■■■■□ 3.57
U2AF1-203ENST00000398137 C14orf37Q86TY3 774 aa37.36■■■■□ 3.57
U2AF1-203ENST00000398137 RPGRIP1LQ68CZ1 1315 aa37.35■■■■□ 3.57
U2AF1-203ENST00000398137 PHLPP1O60346 1717 aa37.34■■■■□ 3.57
U2AF1-203ENST00000398137 VGFO15240 615 aaPredicted RBP37.32■■■■□ 3.56
U2AF1-203ENST00000398137 SPATA31E1Q6ZUB1 1445 aa37.32■■■■□ 3.56
U2AF1-203ENST00000398137 CADPS2Q86UW7 1296 aa37.31■■■■□ 3.56
U2AF1-203ENST00000398137 CCDC144AA2RUR9 1427 aa37.3■■■■□ 3.56
U2AF1-203ENST00000398137 COL16A1Q07092 1604 aaPredicted RBP37.29■■■■□ 3.56
U2AF1-203ENST00000398137 DCCP43146 1447 aa37.27■■■■□ 3.56
U2AF1-203ENST00000398137 IFT172Q9UG01 1749 aa37.27■■■■□ 3.56
U2AF1-203ENST00000398137 ATF3P18847 181 aa37.27■■■■□ 3.56
U2AF1-203ENST00000398137 NALCNQ8IZF0 1738 aa37.27■■■■□ 3.56
U2AF1-203ENST00000398137 DHX57Q6P158 1386 aaKnown RBP37.26■■■■□ 3.55
U2AF1-203ENST00000398137 AHDC1Q5TGY3 1603 aaPredicted RBP37.23■■■■□ 3.55
U2AF1-203ENST00000398137 RGS17Q9UGC6 210 aaPredicted RBP37.23■■■■□ 3.55
U2AF1-203ENST00000398137 ADGRL3Q9HAR2 1447 aa37.22■■■■□ 3.55
U2AF1-203ENST00000398137 ANKRD30BQ9BXX2 1392 aa37.22■■■■□ 3.55
U2AF1-203ENST00000398137 PHF23Q9BUL5 403 aaPredicted RBP37.22■■■■□ 3.55
U2AF1-203ENST00000398137 MST1RQ04912 1400 aa37.21■■■■□ 3.55
U2AF1-203ENST00000398137 PRAG1Q86YV5 1406 aa37.21■■■■□ 3.55
U2AF1-203ENST00000398137 ADGRF5Q8IZF2 1346 aa37.21■■■■□ 3.55
U2AF1-203ENST00000398137 PTCH1Q13635 1447 aa37.2■■■■□ 3.55
U2AF1-203ENST00000398137 ROBO2Q9HCK4 1378 aa37.19■■■■□ 3.54
U2AF1-203ENST00000398137 BRINP3Q76B58 766 aa37.19■■■■□ 3.54
U2AF1-203ENST00000398137 RGL3Q3MIN7 710 aa37.18■■■■□ 3.54
U2AF1-203ENST00000398137 JCADQ9P266 1359 aa37.15■■■■□ 3.54
U2AF1-203ENST00000398137 ASXL1Q8IXJ9 1541 aa37.14■■■■□ 3.54
U2AF1-203ENST00000398137 NHSL1Q5SYE7 1610 aa37.09■■■■□ 3.53
U2AF1-203ENST00000398137 PIK3C2GO75747 1445 aa37.07■■■■□ 3.52
U2AF1-203ENST00000398137 SHPRHQ149N8 1683 aa37.05■■■■□ 3.52
U2AF1-203ENST00000398137 LRP6O75581 1613 aa37.04■■■■□ 3.52
U2AF1-203ENST00000398137 C1orf167Q5SNV9 1468 aa37.01■■■■□ 3.52
U2AF1-203ENST00000398137 TECPR2O15040 1411 aa37■■■■□ 3.51
U2AF1-203ENST00000398137 NRXN1Q9ULB1 1477 aa37■■■■□ 3.51
U2AF1-203ENST00000398137 POTEAQ6S8J7 498 aa36.98■■■■□ 3.51
U2AF1-203ENST00000398137 DDX17Q92841 729 aaKnown RBP36.98■■■■□ 3.51
U2AF1-203ENST00000398137 KNDC1Q76NI1 1749 aa36.97■■■■□ 3.51
U2AF1-203ENST00000398137 LRPPRCP42704 1394 aaKnown RBP36.96■■■■□ 3.51
U2AF1-203ENST00000398137 TMEM132EQ6IEE7 984 aa36.96■■■■□ 3.51
U2AF1-203ENST00000398137 SPATA31A6Q5VVP1 1343 aa36.95■■■■□ 3.51
U2AF1-203ENST00000398137 LAMC1P11047 1609 aa36.95■■■■□ 3.51
U2AF1-203ENST00000398137 MYOM2P54296 1465 aa36.94■■■■□ 3.5
U2AF1-203ENST00000398137 ABCC11Q96J66 1382 aa36.92■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms