RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 SLC4A1APQ9BWU0 796 aaKnown RBP25.03■■□□□ 1.6
APTR-201ENST00000398043 XIRP1Q702N8 1843 aaKnown RBP25.01■■□□□ 1.59
APTR-201ENST00000398043 PLEKHG1Q9ULL1 1385 aa24.99■■□□□ 1.59
APTR-201ENST00000398043 CHGAP10645 457 aaKnown RBP24.98■■□□□ 1.59
APTR-201ENST00000398043 CHD2O14647 1828 aaKnown RBP24.98■■□□□ 1.59
APTR-201ENST00000398043 RAB3GAP2Q9H2M9 1393 aa24.97■■□□□ 1.59
APTR-201ENST00000398043 ACIN1Q9UKV3 1341 aaKnown RBP24.96■■□□□ 1.59
APTR-201ENST00000398043 MPHOSPH9Q99550 1183 aa24.96■■□□□ 1.59
APTR-201ENST00000398043 LRRC7Q96NW7 1537 aa24.96■■□□□ 1.59
APTR-201ENST00000398043 NWD1Q149M9 1564 aa24.94■■□□□ 1.58
APTR-201ENST00000398043 HDGFP51858 240 aaKnown RBP24.94■■□□□ 1.58
APTR-201ENST00000398043 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.94■■□□□ 1.58
APTR-201ENST00000398043 NEXMIFQ5QGS0 1516 aa24.94■■□□□ 1.58
APTR-201ENST00000398043 NRXN3Q9Y4C0 1643 aa24.94■■□□□ 1.58
APTR-201ENST00000398043 FOXD1Q16676 465 aa24.93■■□□□ 1.58
APTR-201ENST00000398043 SLC26A8Q96RN1 970 aa24.92■■□□□ 1.58
APTR-201ENST00000398043 ADAMTS13Q76LX8 1427 aa24.92■■□□□ 1.58
APTR-201ENST00000398043 ALKQ9UM73 1620 aa24.9■■□□□ 1.58
APTR-201ENST00000398043 DIP2AQ14689 1571 aa24.9■■□□□ 1.58
APTR-201ENST00000398043 PPLO60437 1756 aa24.9■■□□□ 1.58
APTR-201ENST00000398043 NUTM2DQ5VT03 806 aaPredicted RBP24.89■■□□□ 1.58
APTR-201ENST00000398043 SETBP1Q9Y6X0 1596 aa24.88■■□□□ 1.57
APTR-201ENST00000398043 PPP1R15AO75807 674 aaPredicted RBP24.88■■□□□ 1.57
APTR-201ENST00000398043 KCNA6P17658 529 aa24.87■■□□□ 1.57
APTR-201ENST00000398043 HRCP23327 699 aa24.87■■□□□ 1.57
APTR-201ENST00000398043 TBX22Q9Y458 520 aa24.86■■□□□ 1.57
APTR-201ENST00000398043 IFT172Q9UG01 1749 aa24.84■■□□□ 1.57
APTR-201ENST00000398043 NKTRP30414 1462 aaKnown RBP24.83■■□□□ 1.57
APTR-201ENST00000398043 ZNF326Q5BKZ1 582 aaKnown RBP24.83■■□□□ 1.57
APTR-201ENST00000398043 SENP3Q9H4L4 574 aaPredicted RBP24.83■■□□□ 1.57
APTR-201ENST00000398043 CCDC144AA2RUR9 1427 aa24.82■■□□□ 1.56
APTR-201ENST00000398043 SETD1AO15047 1707 aaKnown RBP24.82■■□□□ 1.56
APTR-201ENST00000398043 SPATA31E1Q6ZUB1 1445 aa24.82■■□□□ 1.56
APTR-201ENST00000398043 UBAP1LF5GYI3 381 aa24.81■■□□□ 1.56
APTR-201ENST00000398043 BCANQ96GW7 911 aa24.81■■□□□ 1.56
APTR-201ENST00000398043 PIK3R4Q99570 1358 aa24.8■■□□□ 1.56
APTR-201ENST00000398043 RPGRIP1LQ68CZ1 1315 aa24.78■■□□□ 1.56
APTR-201ENST00000398043 XRN1Q8IZH2 1706 aaKnown RBP24.77■■□□□ 1.56
APTR-201ENST00000398043 PTPRUQ92729 1446 aa24.77■■□□□ 1.56
APTR-201ENST00000398043 TMEM94Q12767 1356 aa24.76■■□□□ 1.55
APTR-201ENST00000398043 TOM1O60784 492 aa24.74■■□□□ 1.55
APTR-201ENST00000398043 ANKRD30BQ9BXX2 1392 aa24.73■■□□□ 1.55
APTR-201ENST00000398043 PROSER2Q86WR7 435 aaPredicted RBP24.72■■□□□ 1.55
APTR-201ENST00000398043 METP08581 1390 aa24.71■■□□□ 1.55
APTR-201ENST00000398043 VGFO15240 615 aaPredicted RBP24.71■■□□□ 1.55
APTR-201ENST00000398043 RBM33Q96EV2 1170 aaKnown RBP24.69■■□□□ 1.54
APTR-201ENST00000398043 NCOA3Q9Y6Q9 1424 aa24.68■■□□□ 1.54
APTR-201ENST00000398043 AMOTL2Q9Y2J4 779 aa24.66■■□□□ 1.54
APTR-201ENST00000398043 RGL3Q3MIN7 710 aa24.65■■□□□ 1.54
APTR-201ENST00000398043 ADGRF5Q8IZF2 1346 aa24.64■■□□□ 1.54
APTR-201ENST00000398043 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.64■■□□□ 1.54
APTR-201ENST00000398043 PIP4K2BP78356 416 aa24.64■■□□□ 1.54
APTR-201ENST00000398043 PRAG1Q86YV5 1406 aa24.61■■□□□ 1.53
APTR-201ENST00000398043 NRXN1Q9ULB1 1477 aa24.61■■□□□ 1.53
APTR-201ENST00000398043 PIK3C2GO75747 1445 aa24.6■■□□□ 1.53
APTR-201ENST00000398043 MYOM2P54296 1465 aa24.59■■□□□ 1.53
APTR-201ENST00000398043 MSH6P52701 1360 aa24.59■■□□□ 1.53
APTR-201ENST00000398043 SCAF1Q9H7N4 1312 aaKnown RBP24.58■■□□□ 1.52
APTR-201ENST00000398043 ROBO1Q9Y6N7 1651 aa24.56■■□□□ 1.52
APTR-201ENST00000398043 ASXL1Q8IXJ9 1541 aa24.56■■□□□ 1.52
APTR-201ENST00000398043 NALCNQ8IZF0 1738 aa24.56■■□□□ 1.52
APTR-201ENST00000398043 FAM135BQ49AJ0 1406 aa24.56■■□□□ 1.52
APTR-201ENST00000398043 HSPA1LP34931 641 aa24.56■■□□□ 1.52
APTR-201ENST00000398043 PTCH1Q13635 1447 aa24.54■■□□□ 1.52
APTR-201ENST00000398043 LAMC1P11047 1609 aa24.53■■□□□ 1.52
APTR-201ENST00000398043 KNDC1Q76NI1 1749 aa24.53■■□□□ 1.52
APTR-201ENST00000398043 C19orf44Q9H6X5 657 aa24.52■■□□□ 1.52
APTR-201ENST00000398043 ROBO2Q9HCK4 1378 aa24.51■■□□□ 1.51
APTR-201ENST00000398043 DCCP43146 1447 aa24.51■■□□□ 1.51
APTR-201ENST00000398043 SLAIN2Q9P270 581 aa24.49■■□□□ 1.51
APTR-201ENST00000398043 DHX57Q6P158 1386 aaKnown RBP24.49■■□□□ 1.51
APTR-201ENST00000398043 TECPR2O15040 1411 aa24.48■■□□□ 1.51
APTR-201ENST00000398043 C14orf93Q9H972 538 aaKnown RBP24.48■■□□□ 1.51
APTR-201ENST00000398043 ADGRL3Q9HAR2 1447 aa24.48■■□□□ 1.51
APTR-201ENST00000398043 TRIM26Q12899 539 aaPredicted RBP24.47■■□□□ 1.51
APTR-201ENST00000398043 LRPPRCP42704 1394 aaKnown RBP24.45■■□□□ 1.5
APTR-201ENST00000398043 C14orf37Q86TY3 774 aa24.45■■□□□ 1.5
APTR-201ENST00000398043 CADPS2Q86UW7 1296 aa24.45■■□□□ 1.5
APTR-201ENST00000398043 ABCC11Q96J66 1382 aa24.43■■□□□ 1.5
APTR-201ENST00000398043 ATF3P18847 181 aa24.42■■□□□ 1.5
APTR-201ENST00000398043 TMEM132EQ6IEE7 984 aa24.42■■□□□ 1.5
APTR-201ENST00000398043 MST1RQ04912 1400 aa24.42■■□□□ 1.5
APTR-201ENST00000398043 YTHDC2Q9H6S0 1430 aaKnown RBP24.42■■□□□ 1.5
APTR-201ENST00000398043 ADGRB1O14514 1584 aa24.42■■□□□ 1.5
APTR-201ENST00000398043 PHLPP1O60346 1717 aa24.41■■□□□ 1.5
APTR-201ENST00000398043 CFAP70Q5T0N1 1121 aa24.41■■□□□ 1.5
APTR-201ENST00000398043 DCAF11Q8TEB1 546 aa24.41■■□□□ 1.5
APTR-201ENST00000398043 STAC3Q96MF2 364 aa24.41■■□□□ 1.5
APTR-201ENST00000398043 COL16A1Q07092 1604 aaPredicted RBP24.38■■□□□ 1.49
APTR-201ENST00000398043 AHDC1Q5TGY3 1603 aaPredicted RBP24.38■■□□□ 1.49
APTR-201ENST00000398043 KIAA1210Q9ULL0 1709 aa24.36■■□□□ 1.49
APTR-201ENST00000398043 STK26Q9P289 416 aa24.36■■□□□ 1.49
APTR-201ENST00000398043 KDM2AQ9Y2K7 1162 aa24.36■■□□□ 1.49
APTR-201ENST00000398043 CDC42BPGQ6DT37 1551 aa24.36■■□□□ 1.49
APTR-201ENST00000398043 NHSL1Q5SYE7 1610 aa24.35■■□□□ 1.49
APTR-201ENST00000398043 MED1Q15648 1581 aaPredicted RBP24.35■■□□□ 1.49
APTR-201ENST00000398043 SIRT1Q96EB6 747 aa24.35■■□□□ 1.49
APTR-201ENST00000398043 PLEKHH1Q9ULM0 1364 aa24.34■■□□□ 1.49
APTR-201ENST00000398043 DLC1Q96QB1 1528 aa24.34■■□□□ 1.49
APTR-201ENST00000398043 BRINP3Q76B58 766 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms